RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 TMEM128Q5BJH2 165 aa14.06□□□□□ -0.16
RTN3-205ENST00000356000 TMEM64Q6YI46 380 aa14.06□□□□□ -0.16
RTN3-205ENST00000356000 ZNF595Q8IYB9 648 aa14.06□□□□□ -0.16
RTN3-205ENST00000356000 ZNF679Q8IYX0 411 aa14.06□□□□□ -0.16
RTN3-205ENST00000356000 HS6ST3Q8IZP7 471 aa14.06□□□□□ -0.16
RTN3-205ENST00000356000 OR51A7Q8NH64 312 aa14.06□□□□□ -0.16
RTN3-205ENST00000356000 TMEM106AQ96A25 262 aa14.06□□□□□ -0.16
RTN3-205ENST00000356000 CMBLQ96DG6 245 aa14.06□□□□□ -0.16
RTN3-205ENST00000356000 C16orf58Q96GQ5 468 aa14.06□□□□□ -0.16
RTN3-205ENST00000356000 ELOVL1Q9BW60 279 aa14.06□□□□□ -0.16
RTN3-205ENST00000356000 FOXJ2Q9P0K8 574 aa14.06□□□□□ -0.16
RTN3-205ENST00000356000 NPIPB15A6NHN6 443 aaPredicted RBP14.05□□□□□ -0.16
RTN3-205ENST00000356000 LILRB3O75022 631 aa14.05□□□□□ -0.16
RTN3-205ENST00000356000 SCGNO76038 276 aa14.05□□□□□ -0.16
RTN3-205ENST00000356000 HPRT1P00492 218 aa14.05□□□□□ -0.16
RTN3-205ENST00000356000 SRP19P09132 144 aaKnown RBP14.05□□□□□ -0.16
RTN3-205ENST00000356000 RAB7AP51149 207 aa14.05□□□□□ -0.16
RTN3-205ENST00000356000 ZNF136P52737 540 aa14.05□□□□□ -0.16
RTN3-205ENST00000356000 S100A10P60903 97 aa14.05□□□□□ -0.16
RTN3-205ENST00000356000 RFLNAQ6ZTI6 216 aa14.05□□□□□ -0.16
RTN3-205ENST00000356000 ARL14EPQ8N8R7 260 aaPredicted RBP14.05□□□□□ -0.16
RTN3-205ENST00000356000 ZNRF4Q8WWF5 429 aa14.05□□□□□ -0.16
RTN3-205ENST00000356000 UBE2E3Q969T4 207 aa14.05□□□□□ -0.16
RTN3-205ENST00000356000 TMEM18Q96B42 140 aa14.05□□□□□ -0.16
RTN3-205ENST00000356000 TMEM202A6NGA9 273 aa14.05□□□□□ -0.16
RTN3-205ENST00000356000 SLC38A8A6NNN8 435 aa14.05□□□□□ -0.16
RTN3-205ENST00000356000 B4DEV8 164 aa14.05□□□□□ -0.16
RTN3-205ENST00000356000 FCMRO60667 390 aa14.05□□□□□ -0.16
RTN3-205ENST00000356000 UPK3AO75631 287 aa14.05□□□□□ -0.16
RTN3-205ENST00000356000 ZIC2O95409 532 aaPredicted RBP14.05□□□□□ -0.16
RTN3-205ENST00000356000 LCATP04180 440 aa14.05□□□□□ -0.16
RTN3-205ENST00000356000 GIMD1P0DJR0 217 aa14.05□□□□□ -0.16
RTN3-205ENST00000356000 TNFSF10P50591 281 aa14.05□□□□□ -0.16
RTN3-205ENST00000356000 MMP16P51512 607 aa14.05□□□□□ -0.16
RTN3-205ENST00000356000 PTTG1IPP53801 180 aa14.05□□□□□ -0.16
RTN3-205ENST00000356000 LMAN2Q12907 356 aa14.05□□□□□ -0.16
RTN3-205ENST00000356000 AGBL5Q8NDL9 886 aa14.05□□□□□ -0.16
RTN3-205ENST00000356000 Q8NFD4 153 aa14.05□□□□□ -0.16
RTN3-205ENST00000356000 MCHR2Q969V1 340 aa14.05□□□□□ -0.16
RTN3-205ENST00000356000 OR7D2Q96RA2 312 aa14.05□□□□□ -0.16
RTN3-205ENST00000356000 OSGIN2Q9Y236 505 aa14.05□□□□□ -0.16
RTN3-205ENST00000356000 RBFOX3A6NFN3 312 aa14.04□□□□□ -0.16
RTN3-205ENST00000356000 PPP5D1E7EU14 171 aa14.04□□□□□ -0.16
RTN3-205ENST00000356000 ERAL1O75616 437 aaKnown RBP14.04□□□□□ -0.16
RTN3-205ENST00000356000 RPP14O95059 124 aaKnown RBP14.04□□□□□ -0.16
RTN3-205ENST00000356000 SFT2D2O95562 160 aa14.04□□□□□ -0.16
RTN3-205ENST00000356000 UMODP07911 640 aa14.04□□□□□ -0.16
RTN3-205ENST00000356000 ZNF708P17019 499 aa14.04□□□□□ -0.16
RTN3-205ENST00000356000 FUT3P21217 361 aa14.04□□□□□ -0.16
RTN3-205ENST00000356000 COL10A1Q03692 680 aa14.04□□□□□ -0.16
RTN3-205ENST00000356000 PMPCAQ10713 525 aa14.04□□□□□ -0.16
RTN3-205ENST00000356000 TSTA3Q13630 321 aaPredicted RBP14.04□□□□□ -0.16
RTN3-205ENST00000356000 ZNF100Q8IYN0 542 aa14.04□□□□□ -0.16
RTN3-205ENST00000356000 OR9A1PQ8NGU1 263 aa14.04□□□□□ -0.16
RTN3-205ENST00000356000 LMF1Q96S06 567 aa14.04□□□□□ -0.16
RTN3-205ENST00000356000 GINS3Q9BRX5 216 aa14.04□□□□□ -0.16
RTN3-205ENST00000356000 ANGPTL4Q9BY76 406 aa14.04□□□□□ -0.16
RTN3-205ENST00000356000 SMIM3Q9BZL3 60 aa14.04□□□□□ -0.16
RTN3-205ENST00000356000 ZMAT3Q9HA38 289 aaKnown RBP14.04□□□□□ -0.16
RTN3-205ENST00000356000 TMEM242Q9NWH2 141 aa14.04□□□□□ -0.16
RTN3-205ENST00000356000 XKRY2A2RUG3 117 aa14.04□□□□□ -0.16
RTN3-205ENST00000356000 MYADML2A6NDP7 307 aa14.04□□□□□ -0.16
RTN3-205ENST00000356000 XKRYO14609 159 aa14.04□□□□□ -0.16
RTN3-205ENST00000356000 GRM6O15303 877 aa14.04□□□□□ -0.16
RTN3-205ENST00000356000 MTX2O75431 263 aa14.04□□□□□ -0.16
RTN3-205ENST00000356000 C1QL1O75973 258 aa14.04□□□□□ -0.16
RTN3-205ENST00000356000 LYPD3O95274 346 aa14.04□□□□□ -0.16
RTN3-205ENST00000356000 PRH1P02810 166 aa14.04□□□□□ -0.16
RTN3-205ENST00000356000 SERPINA2P20848 420 aa14.04□□□□□ -0.16
RTN3-205ENST00000356000 OR4K13Q8NH42 304 aa14.04□□□□□ -0.16
RTN3-205ENST00000356000 MS4A6EQ96DS6 147 aa14.04□□□□□ -0.16
RTN3-205ENST00000356000 HIST1H2AAQ96QV6 131 aa14.04□□□□□ -0.16
RTN3-205ENST00000356000 LYSMD1Q96S90 227 aa14.04□□□□□ -0.16
RTN3-205ENST00000356000 MIEN1Q9BRT3 115 aa14.04□□□□□ -0.16
RTN3-205ENST00000356000 NIPSNAP3BQ9BS92 247 aa14.04□□□□□ -0.16
RTN3-205ENST00000356000 AURKAIP1Q9NWT8 199 aaPredicted RBP14.04□□□□□ -0.16
RTN3-205ENST00000356000 CYP8B1Q9UNU6 501 aa14.04□□□□□ -0.16
RTN3-205ENST00000356000 SCN5AQ14524 2016 aa14.03□□□□□ -0.16
RTN3-205ENST00000356000 A0A0A6YYH2 397 aa14.03□□□□□ -0.16
RTN3-205ENST00000356000 A6NJ64 397 aa14.03□□□□□ -0.16
RTN3-205ENST00000356000 CHRM2P08172 466 aa14.03□□□□□ -0.16
RTN3-205ENST00000356000 TACSTD2P09758 323 aa14.03□□□□□ -0.16
RTN3-205ENST00000356000 BCKDHBP21953 392 aa14.03□□□□□ -0.16
RTN3-205ENST00000356000 GDI1P31150 447 aa14.03□□□□□ -0.16
RTN3-205ENST00000356000 SLC6A6P31641 620 aa14.03□□□□□ -0.16
RTN3-205ENST00000356000 NCBP2P52298 156 aaKnown RBP eCLIP14.03□□□□□ -0.16
RTN3-205ENST00000356000 FOXF1Q12946 379 aa14.03□□□□□ -0.16
RTN3-205ENST00000356000 ATP6V1FQ16864 119 aa14.03□□□□□ -0.16
RTN3-205ENST00000356000 NKAIN1Q4KMZ8 207 aa14.03□□□□□ -0.16
RTN3-205ENST00000356000 OR8G2PQ6IF36 304 aa14.03□□□□□ -0.16
RTN3-205ENST00000356000 CHST9Q7L1S5 443 aa14.03□□□□□ -0.16
RTN3-205ENST00000356000 C16orf59Q7L2K0 433 aa14.03□□□□□ -0.16
RTN3-205ENST00000356000 ZNF321PQ8N8H1 164 aa14.03□□□□□ -0.16
RTN3-205ENST00000356000 MARCH1Q8TCQ1 289 aa14.03□□□□□ -0.16
RTN3-205ENST00000356000 TSLPQ969D9 159 aa14.03□□□□□ -0.16
RTN3-205ENST00000356000 FKBP11Q9NYL4 201 aa14.03□□□□□ -0.16
RTN3-205ENST00000356000 ZNF443Q9Y2A4 671 aaPredicted RBP14.03□□□□□ -0.16
RTN3-205ENST00000356000 HEATR5AQ86XA9 2040 aa14.03□□□□□ -0.16
RTN3-205ENST00000356000 ARL5CA6NH57 179 aa14.03□□□□□ -0.16
RTN3-205ENST00000356000 TMEM238C9JI98 176 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms