RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 A0A0J9YW62 118 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 LOC107986453A0A1B0GWG9 222 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 MEGF11A6BM72 1044 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 SLC17A2O00624 439 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 CD5LO43866 347 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 RAMP1O60894 148 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 H2BFMP0C1H6 154 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 HLA-DMAP28067 261 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 CD96P40200 585 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 SOX2P48431 317 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 DNASE1L1P49184 302 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 INPP1P49441 399 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 CAPZA1P52907 286 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 PSMA6P60900 246 aaKnown RBP7.18□□□□□ -1.26
CD44-205ENST00000352818 TNK1Q13470 666 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 CAMK2DQ13557 499 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 DYRK1AQ13627 763 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 HES5Q5TA89 166 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 BCL2L15Q5TBC7 163 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 ABLIM2Q6H8Q1 611 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 FAM166AQ6J272 317 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 KLHL24Q6TFL4 600 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 PLET1Q6UQ28 207 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 DNM1P46Q6ZS02 220 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 ESPNLQ6ZVH7 1005 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 CREB3L2Q70SY1 520 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 SPATC1Q76KD6 591 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 GALNTL5Q7Z4T8 443 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 GPAT4Q86UL3 456 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 GGNQ86UU5 652 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 CMTM4Q8IZR5 234 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 TMEM123Q8N131 208 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 ZNF433Q8N7K0 673 aaPredicted RBP7.18□□□□□ -1.26
CD44-205ENST00000352818 NKAIN3Q8N8D7 197 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 RELL2Q8NC24 303 aaPredicted RBP7.18□□□□□ -1.26
CD44-205ENST00000352818 OR9K2Q8NGE7 335 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 OR51A4Q8NGJ6 313 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 OR10S1Q8NGN2 331 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 DEDD2Q8WXF8 326 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 YIPF5Q969M3 257 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 CREB3L1Q96BA8 519 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 SLAMF6Q96DU3 332 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 ADGRG7Q96K78 797 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 OR2M2Q96R28 347 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 ABHD1Q96SE0 405 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 FAM173AQ9BQD7 235 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 EMC6Q9BV81 110 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 LIN7BQ9HAP6 207 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 ZFP64Q9NPA5 681 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 YAE1D1Q9NRH1 226 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 PLSCR2Q9NRY7 297 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 GLTPQ9NZD2 209 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 CKLFQ9UBR5 152 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 NUFIP1Q9UHK0 495 aaKnown RBP7.18□□□□□ -1.26
CD44-205ENST00000352818 FOXD3Q9UJU5 478 aaPredicted RBP7.18□□□□□ -1.26
CD44-205ENST00000352818 GDF2Q9UK05 429 aaPredicted RBP7.18□□□□□ -1.26
CD44-205ENST00000352818 BOKQ9UMX3 212 aaPredicted RBP7.18□□□□□ -1.26
CD44-205ENST00000352818 SLC22A13Q9Y226 551 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 EMC9Q9Y3B6 208 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 LHFPL6Q9Y693 200 aa7.18□□□□□ -1.26
CD44-205ENST00000352818 A0A0G2JMM0 328 aa7.17□□□□□ -1.26
CD44-205ENST00000352818 FAM240BA0A1B0GVZ2 78 aa7.17□□□□□ -1.26
CD44-205ENST00000352818 TMEM269A0A1B0GVZ9 245 aa7.17□□□□□ -1.26
CD44-205ENST00000352818 A0A1W2PPB8 328 aa7.17□□□□□ -1.26
CD44-205ENST00000352818 A0A1W2PPL8 197 aa7.17□□□□□ -1.26
CD44-205ENST00000352818 LOC390937A0A1W2PQ73 354 aa7.17□□□□□ -1.26
CD44-205ENST00000352818 A0A1W2PRS3 328 aa7.17□□□□□ -1.26
CD44-205ENST00000352818 MEIOCA2RUB1 952 aa7.17□□□□□ -1.26
CD44-205ENST00000352818 HMX3A6NHT5 357 aa7.17□□□□□ -1.26
CD44-205ENST00000352818 KIR3DP1A8MWS1 328 aa7.17□□□□□ -1.26
CD44-205ENST00000352818 NPIPA2E9PIF3 369 aa7.17□□□□□ -1.26
CD44-205ENST00000352818 NPIPA3F8WFD2 350 aa7.17□□□□□ -1.26
CD44-205ENST00000352818 EEF1E1O43324 174 aaKnown RBP7.17□□□□□ -1.26
CD44-205ENST00000352818 NEURL1O76050 574 aa7.17□□□□□ -1.26
CD44-205ENST00000352818 QDPRP09417 244 aa7.17□□□□□ -1.26
CD44-205ENST00000352818 ZNF24P17028 368 aa7.17□□□□□ -1.26
CD44-205ENST00000352818 TCEA1P23193 301 aaKnown RBP7.17□□□□□ -1.26
CD44-205ENST00000352818 CTSSP25774 331 aa7.17□□□□□ -1.26
CD44-205ENST00000352818 SLC6A1P30531 599 aa7.17□□□□□ -1.26
CD44-205ENST00000352818 BTCP35070 178 aa7.17□□□□□ -1.26
CD44-205ENST00000352818 MAGEB1P43366 347 aa7.17□□□□□ -1.26
CD44-205ENST00000352818 CSNK1A1P48729 337 aa7.17□□□□□ -1.26
CD44-205ENST00000352818 CLDN17P56750 224 aa7.17□□□□□ -1.26
CD44-205ENST00000352818 BTG1P62324 171 aa7.17□□□□□ -1.26
CD44-205ENST00000352818 GRB2P62993 217 aaKnown RBP7.17□□□□□ -1.26
CD44-205ENST00000352818 HIST1H3AP68431 136 aa7.17□□□□□ -1.26
CD44-205ENST00000352818 FOXO1Q12778 655 aa7.17□□□□□ -1.26
CD44-205ENST00000352818 GPR176Q14439 515 aa7.17□□□□□ -1.26
CD44-205ENST00000352818 OR1C1Q15619 314 aa7.17□□□□□ -1.26
CD44-205ENST00000352818 SLC36A2Q495M3 483 aa7.17□□□□□ -1.26
CD44-205ENST00000352818 PLA1AQ53H76 456 aa7.17□□□□□ -1.26
CD44-205ENST00000352818 PDSS1Q5T2R2 415 aa7.17□□□□□ -1.26
CD44-205ENST00000352818 HIST2H3PS2Q5TEC6 136 aa7.17□□□□□ -1.26
CD44-205ENST00000352818 ABHD17BQ5VST6 288 aa7.17□□□□□ -1.26
CD44-205ENST00000352818 GLT8D1Q68CQ7 371 aa7.17□□□□□ -1.26
CD44-205ENST00000352818 ZNF57Q68EA5 555 aaPredicted RBP7.17□□□□□ -1.26
CD44-205ENST00000352818 LRFN4Q6PJG9 635 aa7.17□□□□□ -1.26
CD44-205ENST00000352818 HIST2H3AQ71DI3 136 aa7.17□□□□□ -1.26
CD44-205ENST00000352818 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.17□□□□□ -1.26
CD44-205ENST00000352818 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms