RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 CTSLP07711 333 aa20.86■□□□□ 0.93
NPAS3-201ENST00000346562 DGCR2P98153 550 aa20.86■□□□□ 0.93
NPAS3-201ENST00000346562 ARHGEF39Q8N4T4 335 aa20.86■□□□□ 0.93
NPAS3-201ENST00000346562 FGF14Q92915 247 aa20.86■□□□□ 0.93
NPAS3-201ENST00000346562 C14orf79Q96F83 325 aa20.86■□□□□ 0.93
NPAS3-201ENST00000346562 TRMT61AQ96FX7 289 aaKnown RBP20.86■□□□□ 0.93
NPAS3-201ENST00000346562 NRXN3Q9Y4C0 1643 aa20.86■□□□□ 0.93
NPAS3-201ENST00000346562 FCER1GP30273 86 aa20.86■□□□□ 0.93
NPAS3-201ENST00000346562 RPL13AP40429 203 aaKnown RBP20.86■□□□□ 0.93
NPAS3-201ENST00000346562 KIAA0141Q14154 515 aaPredicted RBP20.86■□□□□ 0.93
NPAS3-201ENST00000346562 TMEM211Q6ICI0 200 aa20.86■□□□□ 0.93
NPAS3-201ENST00000346562 SLC36A1Q7Z2H8 476 aa20.86■□□□□ 0.93
NPAS3-201ENST00000346562 CDH26Q8IXH8 852 aa20.86■□□□□ 0.93
NPAS3-201ENST00000346562 GPM6AP51674 278 aa20.86■□□□□ 0.93
NPAS3-201ENST00000346562 ASAH1Q13510 395 aa20.86■□□□□ 0.93
NPAS3-201ENST00000346562 PNLIPRP3Q17RR3 467 aa20.86■□□□□ 0.93
NPAS3-201ENST00000346562 ADAT1Q9BUB4 502 aaKnown RBP20.86■□□□□ 0.93
NPAS3-201ENST00000346562 TBX21Q9UL17 535 aa20.86■□□□□ 0.93
NPAS3-201ENST00000346562 UMAD1C9J7I0 102 aa20.86■□□□□ 0.93
NPAS3-201ENST00000346562 FCMRO60667 390 aa20.86■□□□□ 0.93
NPAS3-201ENST00000346562 HPP00738 406 aa20.86■□□□□ 0.93
NPAS3-201ENST00000346562 STAC2Q6ZMT1 411 aa20.86■□□□□ 0.93
NPAS3-201ENST00000346562 CADM4Q8NFZ8 388 aa20.86■□□□□ 0.93
NPAS3-201ENST00000346562 DDX60Q8IY21 1712 aaKnown RBP20.86■□□□□ 0.93
NPAS3-201ENST00000346562 TRAPPC2P0DI81 140 aa20.86■□□□□ 0.93
NPAS3-201ENST00000346562 TRAPPC2BP0DI82 140 aa20.86■□□□□ 0.93
NPAS3-201ENST00000346562 OTUD1Q5VV17 481 aaPredicted RBP20.86■□□□□ 0.93
NPAS3-201ENST00000346562 LHX4Q969G2 390 aa20.86■□□□□ 0.93
NPAS3-201ENST00000346562 YTHDF2Q9Y5A9 579 aaKnown RBP20.86■□□□□ 0.93
NPAS3-201ENST00000346562 KLK8O60259 260 aa20.85■□□□□ 0.93
NPAS3-201ENST00000346562 HRH1P35367 487 aa20.85■□□□□ 0.93
NPAS3-201ENST00000346562 CEACAM16Q2WEN9 425 aa20.85■□□□□ 0.93
NPAS3-201ENST00000346562 TMEM123Q8N131 208 aa20.85■□□□□ 0.93
NPAS3-201ENST00000346562 SLC24A4Q8NFF2 622 aa20.85■□□□□ 0.93
NPAS3-201ENST00000346562 BCL7CQ8WUZ0 217 aaPredicted RBP20.85■□□□□ 0.93
NPAS3-201ENST00000346562 SPACA5Q96QH8 159 aa20.85■□□□□ 0.93
NPAS3-201ENST00000346562 S100A8P05109 93 aa20.85■□□□□ 0.93
NPAS3-201ENST00000346562 FGF7P21781 194 aa20.85■□□□□ 0.93
NPAS3-201ENST00000346562 PSMB6P28072 239 aa20.85■□□□□ 0.93
NPAS3-201ENST00000346562 OR13D1Q8NGV5 346 aa20.85■□□□□ 0.93
NPAS3-201ENST00000346562 SLC35B4Q969S0 331 aa20.85■□□□□ 0.93
NPAS3-201ENST00000346562 RPL34P49207 117 aaKnown RBP20.85■□□□□ 0.93
NPAS3-201ENST00000346562 CDK5R1Q15078 307 aa20.85■□□□□ 0.93
NPAS3-201ENST00000346562 CNN1P51911 297 aaKnown RBP20.85■□□□□ 0.93
NPAS3-201ENST00000346562 SLCO1C1Q9NYB5 712 aa20.85■□□□□ 0.93
NPAS3-201ENST00000346562 ZNF727A8MUV8 499 aa20.84■□□□□ 0.93
NPAS3-201ENST00000346562 MGMTP16455 207 aa20.84■□□□□ 0.93
NPAS3-201ENST00000346562 PIGPP57054 158 aa20.84■□□□□ 0.93
NPAS3-201ENST00000346562 ZNF816Q0VGE8 651 aaPredicted RBP20.84■□□□□ 0.93
NPAS3-201ENST00000346562 LYPD8Q6UX82 237 aa20.84■□□□□ 0.93
NPAS3-201ENST00000346562 OR1F12Q8NHA8 337 aa20.84■□□□□ 0.93
NPAS3-201ENST00000346562 RRASP10301 218 aa20.84■□□□□ 0.93
NPAS3-201ENST00000346562 SSBP1Q04837 148 aaKnown RBP20.84■□□□□ 0.93
NPAS3-201ENST00000346562 SLC25A32Q9H2D1 315 aa20.84■□□□□ 0.93
NPAS3-201ENST00000346562 ANKRD36CQ5JPF3 1778 aa20.84■□□□□ 0.93
NPAS3-201ENST00000346562 MYH10P35580 1976 aa20.84■□□□□ 0.93
NPAS3-201ENST00000346562 CXorf51AA0A1B0GTR3 108 aa20.84■□□□□ 0.93
NPAS3-201ENST00000346562 TGOLN2O43493 480 aa20.84■□□□□ 0.93
NPAS3-201ENST00000346562 MT-CO3P00414 261 aa20.84■□□□□ 0.93
NPAS3-201ENST00000346562 IGLV3-25P01717 112 aa20.84■□□□□ 0.93
NPAS3-201ENST00000346562 PPP1CAP62136 330 aa20.84■□□□□ 0.93
NPAS3-201ENST00000346562 UBE2FQ969M7 185 aa20.84■□□□□ 0.93
NPAS3-201ENST00000346562 PTDSS2Q9BVG9 487 aa20.84■□□□□ 0.93
NPAS3-201ENST00000346562 OCIAD1Q9NX40 245 aa20.84■□□□□ 0.93
NPAS3-201ENST00000346562 B9D1Q9UPM9 204 aa20.84■□□□□ 0.93
NPAS3-201ENST00000346562 ISL1P61371 349 aa20.84■□□□□ 0.93
NPAS3-201ENST00000346562 Q56UQ5 140 aa20.84■□□□□ 0.93
NPAS3-201ENST00000346562 PXDC1Q5TGL8 231 aa20.84■□□□□ 0.93
NPAS3-201ENST00000346562 DTWD2Q8NBA8 298 aa20.84■□□□□ 0.93
NPAS3-201ENST00000346562 OR2Z1Q8NG97 314 aa20.84■□□□□ 0.93
NPAS3-201ENST00000346562 NUDCD2Q8WVJ2 157 aa20.84■□□□□ 0.93
NPAS3-201ENST00000346562 RGPD2P0DJD1 1756 aa20.84■□□□□ 0.93
NPAS3-201ENST00000346562 IFITM5A6NNB3 132 aa20.84■□□□□ 0.93
NPAS3-201ENST00000346562 SPP1P10451 314 aa20.84■□□□□ 0.93
NPAS3-201ENST00000346562 SRP14P37108 136 aaKnown RBP20.84■□□□□ 0.93
NPAS3-201ENST00000346562 SPATA46Q5T0L3 261 aa20.84■□□□□ 0.93
NPAS3-201ENST00000346562 C2orf50Q96LR7 162 aa20.84■□□□□ 0.93
NPAS3-201ENST00000346562 C19orf43Q9BQ61 176 aa20.84■□□□□ 0.93
NPAS3-201ENST00000346562 FAM103A1Q9BTL3 118 aaKnown RBP20.84■□□□□ 0.93
NPAS3-201ENST00000346562 NKX6-2Q9C056 277 aaPredicted RBP20.84■□□□□ 0.93
NPAS3-201ENST00000346562 C4AP0C0L4 1744 aa20.83■□□□□ 0.93
NPAS3-201ENST00000346562 TMEM127O75204 238 aa20.83■□□□□ 0.93
NPAS3-201ENST00000346562 IL11RAQ14626 422 aa20.83■□□□□ 0.93
NPAS3-201ENST00000346562 FBXO34Q9NWN3 711 aa20.83■□□□□ 0.93
NPAS3-201ENST00000346562 TRBV5-4A0A0C4DH59 114 aa20.83■□□□□ 0.93
NPAS3-201ENST00000346562 MEOX1P50221 254 aa20.83■□□□□ 0.93
NPAS3-201ENST00000346562 STUMQ69YW2 141 aa20.83■□□□□ 0.93
NPAS3-201ENST00000346562 H3F3CQ6NXT2 135 aa20.83■□□□□ 0.93
NPAS3-201ENST00000346562 AKR7LQ8NHP1 331 aa20.83■□□□□ 0.93
NPAS3-201ENST00000346562 FOXJ3Q9UPW0 622 aa20.83■□□□□ 0.93
NPAS3-201ENST00000346562 SLC22A13Q9Y226 551 aa20.83■□□□□ 0.93
NPAS3-201ENST00000346562 A0A0A6YYD5 115 aa20.83■□□□□ 0.92
NPAS3-201ENST00000346562 SNRPNP63162 240 aaKnown RBP20.83■□□□□ 0.92
NPAS3-201ENST00000346562 ESRP2Q9H6T0 727 aaKnown RBP20.83■□□□□ 0.92
NPAS3-201ENST00000346562 AAMDCQ9H7C9 122 aa20.83■□□□□ 0.92
NPAS3-201ENST00000346562 SPRY1O43609 319 aaPredicted RBP20.82■□□□□ 0.92
NPAS3-201ENST00000346562 ZBTB25P24278 435 aa20.82■□□□□ 0.92
NPAS3-201ENST00000346562 RAB1AP62820 205 aa20.82■□□□□ 0.92
NPAS3-201ENST00000346562 NECAP1Q8NC96 275 aa20.82■□□□□ 0.92
NPAS3-201ENST00000346562 SIGLECL1Q8N7X8 197 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms