RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 XYLT2Q9H1B5 865 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 AAMDCQ9H7C9 122 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 NRIP3Q9NQ35 241 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 EGFL7Q9UHF1 273 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 HIVEP2P31629 2446 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 EDIL3O43854 480 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 C6orf47O95873 294 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 OR5AC1P0C628 307 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 NMUP48645 174 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 CDKN1CP49918 316 aaPredicted RBP2.99□□□□□ -1.93
CSMD3-202ENST00000339701 MMP16P51512 607 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 TMEM97Q5BJF2 176 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 FFAR4Q5NUL3 377 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 NCMAPQ5T1S8 102 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 SLC24A4Q8NFF2 622 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 BIRC7Q96CA5 298 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 SMIM12Q96EX1 92 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 PRELID3AQ96N28 172 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 MACROD1Q9BQ69 325 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 METTL9Q9H1A3 318 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 RPS10P5Q9NQ39 176 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 CYSLTR2Q9NS75 346 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 VSX1Q9NZR4 365 aaPredicted RBP2.99□□□□□ -1.93
CSMD3-202ENST00000339701 LRRC3CA6NJW4 275 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 ZNF814B7Z6K7 855 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 LMO7DNF2Z398 122 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 C3orf80F5H4A9 247 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 LINC01565O15544 149 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 CLEC2LP0C7M8 214 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 TNFRSF1AP19438 455 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 GAMTQ14353 236 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 SLBPQ14493 270 aaKnown RBP eCLIP2.99□□□□□ -1.93
CSMD3-202ENST00000339701 CBLN2Q8IUK8 224 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 THEM6Q8WUY1 208 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 NEUROG1Q92886 237 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 NPY6RQ99463 290 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 C1QTNF3Q9BXJ4 246 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 FBXO34Q9NWN3 711 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 ZMIZ1Q9ULJ6 1067 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 ZNF816-ZNF321PA0A0X1KG74 233 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 TCRBV3S1A0A5B6 114 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 SCGB1D1O95968 90 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 RECKO95980 971 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 DEFA4P12838 97 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 CD99P14209 185 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 GANABQ14697 944 aaKnown RBP2.99□□□□□ -1.93
CSMD3-202ENST00000339701 PGGHGQ32M88 737 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 TOMM20LQ6UXN7 152 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 TMEM183AQ8IXX5 376 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 OR4K13Q8NH42 304 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 H1FXQ92522 213 aaKnown RBP2.99□□□□□ -1.93
CSMD3-202ENST00000339701 PEX11GQ96HA9 241 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 ADGRG7Q96K78 797 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 MRGPRX1Q96LB2 322 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 ZFYVE21Q9BQ24 234 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 WDR76Q9H967 626 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 METTL12A8MUP2 240 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 GOSR2O14653 212 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 PDE6DO43924 150 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 KLF7O75840 302 aaPredicted RBP2.99□□□□□ -1.93
CSMD3-202ENST00000339701 WISP1O95388 367 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 IGFBP1P08833 259 aaPredicted RBP2.99□□□□□ -1.93
CSMD3-202ENST00000339701 CST2P09228 141 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 HNRNPLP14866 589 aaKnown RBP eCLIP2.99□□□□□ -1.93
CSMD3-202ENST00000339701 HTR1FP30939 366 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 ARSDP51689 593 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 ZNF136P52737 540 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 CARD18P57730 90 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 RTP5Q14D33 572 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 DUSP5Q16690 384 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 TMEM196Q5HYL7 178 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 PYROXD2Q8N2H3 581 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 OR4K5Q8NGD3 323 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 SLC38A5Q8WUX1 472 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 GATA6Q92908 595 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 EXOSC8Q96B26 276 aaKnown RBP2.99□□□□□ -1.93
CSMD3-202ENST00000339701 HDAC8Q9BY41 377 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 A4GALTQ9NPC4 353 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 RASL12Q9NYN1 266 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 PCDHGA9Q9Y5G4 932 aaKnown RBP2.99□□□□□ -1.93
CSMD3-202ENST00000339701 ZNF705FA8MVS1 300 aaPredicted RBP2.99□□□□□ -1.93
CSMD3-202ENST00000339701 ZNF732B4DXR9 585 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 PRAMEF11O60813 436 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 PIAS2O75928 621 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 KRASP01116 189 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 DBHP09172 617 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 ZNF705DP0CH99 300 aaPredicted RBP2.99□□□□□ -1.93
CSMD3-202ENST00000339701 ZNF705BP0CI00 300 aaPredicted RBP2.99□□□□□ -1.93
CSMD3-202ENST00000339701 ZNF728P0DKX0 622 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 ARR3P36575 388 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 LSSP48449 732 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 UCP2P55851 309 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 TAS2R38P59533 333 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 DRAM2Q6UX65 266 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 UBE3DQ7Z6J8 389 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 CALHM1Q8IU99 346 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 GPR26Q8NDV2 337 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 SDR9C7Q8NEX9 313 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 AKR7LQ8NHP1 331 aa2.99□□□□□ -1.93
CSMD3-202ENST00000339701 MARCH1Q8TCQ1 289 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms