RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 C11orf71Q6IPW1 123 aa12.05□□□□□ -0.48
APOBEC3B-202ENST00000335760 FDX2Q6P4F2 183 aa12.05□□□□□ -0.48
APOBEC3B-202ENST00000335760 COMMD2Q86X83 199 aa12.05□□□□□ -0.48
APOBEC3B-202ENST00000335760 OR5AS1Q8N127 324 aa12.05□□□□□ -0.48
APOBEC3B-202ENST00000335760 OR51E1Q8TCB6 317 aa12.05□□□□□ -0.48
APOBEC3B-202ENST00000335760 LYZL4Q96KX0 146 aa12.05□□□□□ -0.48
APOBEC3B-202ENST00000335760 MND1Q9BWT6 205 aa12.05□□□□□ -0.48
APOBEC3B-202ENST00000335760 RGCCQ9H4X1 137 aa12.05□□□□□ -0.48
APOBEC3B-202ENST00000335760 OPA3Q9H6K4 179 aa12.05□□□□□ -0.48
APOBEC3B-202ENST00000335760 BABAM2Q9NXR7 383 aa12.05□□□□□ -0.48
APOBEC3B-202ENST00000335760 FRRS1LQ9P0K9 344 aa12.05□□□□□ -0.48
APOBEC3B-202ENST00000335760 GPR160Q9UJ42 338 aa12.05□□□□□ -0.48
APOBEC3B-202ENST00000335760 PLEKHA6Q9Y2H5 1048 aa12.05□□□□□ -0.48
APOBEC3B-202ENST00000335760 A0A0U1RQV5 110 aa12.05□□□□□ -0.48
APOBEC3B-202ENST00000335760 GGT3PA6NGU5 568 aa12.05□□□□□ -0.48
APOBEC3B-202ENST00000335760 P2RY10O00398 339 aa12.05□□□□□ -0.48
APOBEC3B-202ENST00000335760 SELEP16581 610 aa12.05□□□□□ -0.48
APOBEC3B-202ENST00000335760 CFL1P23528 166 aaKnown RBP12.05□□□□□ -0.48
APOBEC3B-202ENST00000335760 TGM4P49221 684 aa12.05□□□□□ -0.48
APOBEC3B-202ENST00000335760 GTF2A1P52655 376 aaPredicted RBP12.05□□□□□ -0.48
APOBEC3B-202ENST00000335760 CDH15P55291 814 aa12.05□□□□□ -0.48
APOBEC3B-202ENST00000335760 WNT4P56705 351 aa12.05□□□□□ -0.48
APOBEC3B-202ENST00000335760 FAM3AP98173 230 aa12.05□□□□□ -0.48
APOBEC3B-202ENST00000335760 ALKBH1Q13686 389 aaKnown RBP12.05□□□□□ -0.48
APOBEC3B-202ENST00000335760 ZNF485Q8NCK3 441 aa12.05□□□□□ -0.48
APOBEC3B-202ENST00000335760 BHLHE23Q8NDY6 225 aa12.05□□□□□ -0.48
APOBEC3B-202ENST00000335760 HAVCR2Q8TDQ0 301 aa12.05□□□□□ -0.48
APOBEC3B-202ENST00000335760 SOX7Q9BT81 388 aa12.05□□□□□ -0.48
APOBEC3B-202ENST00000335760 CACNG6Q9BXT2 260 aa12.05□□□□□ -0.48
APOBEC3B-202ENST00000335760 DYNLRB1Q9NP97 96 aa12.05□□□□□ -0.48
APOBEC3B-202ENST00000335760 GPR84Q9NQS5 396 aa12.05□□□□□ -0.48
APOBEC3B-202ENST00000335760 ST6GALNAC2Q9UJ37 374 aa12.05□□□□□ -0.48
APOBEC3B-202ENST00000335760 ZNF391Q9UJN7 358 aa12.05□□□□□ -0.48
APOBEC3B-202ENST00000335760 EDARQ9UNE0 448 aa12.05□□□□□ -0.48
APOBEC3B-202ENST00000335760 DSCAMO60469 2012 aa12.04□□□□□ -0.48
APOBEC3B-202ENST00000335760 LRBAP50851 2863 aa12.04□□□□□ -0.48
APOBEC3B-202ENST00000335760 SETXQ7Z333 2677 aaKnown RBP12.04□□□□□ -0.48
APOBEC3B-202ENST00000335760 TRBV2A0A0J9YWF9 115 aa12.04□□□□□ -0.48
APOBEC3B-202ENST00000335760 hCG_38984A0A1B0GV85 526 aa12.04□□□□□ -0.48
APOBEC3B-202ENST00000335760 CD300LBA8K4G0 201 aa12.04□□□□□ -0.48
APOBEC3B-202ENST00000335760 IQCF6A8MYZ5 107 aa12.04□□□□□ -0.48
APOBEC3B-202ENST00000335760 M0R233 179 aa12.04□□□□□ -0.48
APOBEC3B-202ENST00000335760 LALBAP00709 142 aa12.04□□□□□ -0.48
APOBEC3B-202ENST00000335760 RAF1P04049 648 aa12.04□□□□□ -0.48
APOBEC3B-202ENST00000335760 BMP4P12644 408 aa12.04□□□□□ -0.48
APOBEC3B-202ENST00000335760 CD53P19397 219 aa12.04□□□□□ -0.48
APOBEC3B-202ENST00000335760 CDKN1AP38936 164 aa12.04□□□□□ -0.48
APOBEC3B-202ENST00000335760 MAP2K4P45985 399 aa12.04□□□□□ -0.48
APOBEC3B-202ENST00000335760 GSK3AP49840 483 aa12.04□□□□□ -0.48
APOBEC3B-202ENST00000335760 CCR9P51686 369 aa12.04□□□□□ -0.48
APOBEC3B-202ENST00000335760 CHN2P52757 468 aa12.04□□□□□ -0.48
APOBEC3B-202ENST00000335760 XAF1Q6GPH4 301 aa12.04□□□□□ -0.48
APOBEC3B-202ENST00000335760 GTF3AQ92664 365 aaKnown RBP12.04□□□□□ -0.48
APOBEC3B-202ENST00000335760 FAM71F1Q96KD3 344 aaPredicted RBP12.04□□□□□ -0.48
APOBEC3B-202ENST00000335760 OR5M11Q96RB7 305 aa12.04□□□□□ -0.48
APOBEC3B-202ENST00000335760 TRIM36Q9NQ86 728 aa12.04□□□□□ -0.48
APOBEC3B-202ENST00000335760 PMF1-BGLAPU3KQ54 211 aa12.04□□□□□ -0.48
APOBEC3B-202ENST00000335760 A0A1B0GTI1 187 aa12.03□□□□□ -0.48
APOBEC3B-202ENST00000335760 A0A1B0GVI7 797 aa12.03□□□□□ -0.48
APOBEC3B-202ENST00000335760 PLSCR5A0PG75 271 aa12.03□□□□□ -0.48
APOBEC3B-202ENST00000335760 H3BSH0 61 aa12.03□□□□□ -0.48
APOBEC3B-202ENST00000335760 MRPS14O60783 128 aaKnown RBP12.03□□□□□ -0.48
APOBEC3B-202ENST00000335760 IGLV3-1P01715 115 aa12.03□□□□□ -0.48
APOBEC3B-202ENST00000335760 UBCP0CG48 685 aaKnown RBP12.03□□□□□ -0.48
APOBEC3B-202ENST00000335760 NAT2P11245 290 aa12.03□□□□□ -0.48
APOBEC3B-202ENST00000335760 DNASE1P24855 282 aa12.03□□□□□ -0.48
APOBEC3B-202ENST00000335760 MMP15P51511 669 aa12.03□□□□□ -0.48
APOBEC3B-202ENST00000335760 DOC2BQ14184 412 aa12.03□□□□□ -0.48
APOBEC3B-202ENST00000335760 CDK5R1Q15078 307 aa12.03□□□□□ -0.48
APOBEC3B-202ENST00000335760 SPHARQ15513 63 aa12.03□□□□□ -0.48
APOBEC3B-202ENST00000335760 MED22Q15528 200 aa12.03□□□□□ -0.48
APOBEC3B-202ENST00000335760 KCTD21Q4G0X4 260 aa12.03□□□□□ -0.48
APOBEC3B-202ENST00000335760 CCDC58Q4VC31 144 aa12.03□□□□□ -0.48
APOBEC3B-202ENST00000335760 RPL22L1Q6P5R6 122 aaKnown RBP12.03□□□□□ -0.48
APOBEC3B-202ENST00000335760 RDH10Q8IZV5 341 aa12.03□□□□□ -0.48
APOBEC3B-202ENST00000335760 ZNF676Q8N7Q3 588 aa12.03□□□□□ -0.48
APOBEC3B-202ENST00000335760 ZFP41Q8N8Y5 198 aa12.03□□□□□ -0.48
APOBEC3B-202ENST00000335760 OR56B2PQ8NGI1 322 aa12.03□□□□□ -0.48
APOBEC3B-202ENST00000335760 IGFBPL1Q8WX77 278 aa12.03□□□□□ -0.48
APOBEC3B-202ENST00000335760 PIGTQ969N2 578 aa12.03□□□□□ -0.48
APOBEC3B-202ENST00000335760 VRK1Q99986 396 aaPredicted RBP12.03□□□□□ -0.48
APOBEC3B-202ENST00000335760 MSL2Q9HCI7 577 aa12.03□□□□□ -0.48
APOBEC3B-202ENST00000335760 CYSLTR2Q9NS75 346 aa12.03□□□□□ -0.48
APOBEC3B-202ENST00000335760 FBXO9Q9UK97 447 aaPredicted RBP12.03□□□□□ -0.48
APOBEC3B-202ENST00000335760 LSM2Q9Y333 95 aaKnown RBP12.03□□□□□ -0.48
APOBEC3B-202ENST00000335760 SIRT4Q9Y6E7 314 aaPredicted RBP12.03□□□□□ -0.48
APOBEC3B-202ENST00000335760 CENPEQ02224 2701 aa12.02□□□□□ -0.49
APOBEC3B-202ENST00000335760 LOC107986453A0A1B0GWG9 222 aa12.02□□□□□ -0.49
APOBEC3B-202ENST00000335760 OR4C45A6NMZ5 311 aa12.02□□□□□ -0.49
APOBEC3B-202ENST00000335760 OVOL3O00110 214 aa12.02□□□□□ -0.49
APOBEC3B-202ENST00000335760 OGG1O15527 345 aa12.02□□□□□ -0.49
APOBEC3B-202ENST00000335760 SYT7O43581 403 aa12.02□□□□□ -0.49
APOBEC3B-202ENST00000335760 LILRA1O75019 489 aa12.02□□□□□ -0.49
APOBEC3B-202ENST00000335760 TNFAIP8O95379 198 aa12.02□□□□□ -0.49
APOBEC3B-202ENST00000335760 LIPAP38571 399 aa12.02□□□□□ -0.49
APOBEC3B-202ENST00000335760 DDOSTP39656 456 aa12.02□□□□□ -0.49
APOBEC3B-202ENST00000335760 MAP2K3P46734 347 aa12.02□□□□□ -0.49
APOBEC3B-202ENST00000335760 PPOXP50336 477 aa12.02□□□□□ -0.49
APOBEC3B-202ENST00000335760 ZNF81P51508 661 aa12.02□□□□□ -0.49
APOBEC3B-202ENST00000335760 TAS2R43P59537 309 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms