RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 HOXA1P49639 335 aaPredicted RBP11.65□□□□□ -0.54
VSTM4-202ENST00000332853 GPM6AP51674 278 aa11.65□□□□□ -0.54
VSTM4-202ENST00000332853 SMIM4Q8WVI0 70 aa11.65□□□□□ -0.54
VSTM4-202ENST00000332853 CNTNAP3Q9BZ76 1288 aa11.65□□□□□ -0.54
VSTM4-202ENST00000332853 BARHL1Q9BZE3 327 aa11.65□□□□□ -0.54
VSTM4-202ENST00000332853 UNKLQ9H9P5 680 aaKnown RBP11.65□□□□□ -0.54
VSTM4-202ENST00000332853 TMEM265A0A087WTH1 108 aa11.65□□□□□ -0.54
VSTM4-202ENST00000332853 OR6C6A6NF89 314 aa11.65□□□□□ -0.54
VSTM4-202ENST00000332853 RPL35P42766 123 aaKnown RBP11.65□□□□□ -0.54
VSTM4-202ENST00000332853 PPT1P50897 306 aa11.65□□□□□ -0.54
VSTM4-202ENST00000332853 PEA15Q15121 130 aa11.65□□□□□ -0.54
VSTM4-202ENST00000332853 ACER2Q5QJU3 275 aa11.65□□□□□ -0.54
VSTM4-202ENST00000332853 D2HGDHQ8N465 521 aa11.65□□□□□ -0.54
VSTM4-202ENST00000332853 ZNF808Q8N4W9 903 aaPredicted RBP11.65□□□□□ -0.54
VSTM4-202ENST00000332853 OR2AE1Q8NHA4 323 aa11.65□□□□□ -0.54
VSTM4-202ENST00000332853 PTP4A1Q93096 173 aa11.65□□□□□ -0.54
VSTM4-202ENST00000332853 IP6K3Q96PC2 410 aa11.65□□□□□ -0.54
VSTM4-202ENST00000332853 D6RAR5 112 aa11.65□□□□□ -0.55
VSTM4-202ENST00000332853 RRP8O43159 456 aaKnown RBP11.65□□□□□ -0.55
VSTM4-202ENST00000332853 CTSBP07858 339 aa11.65□□□□□ -0.55
VSTM4-202ENST00000332853 GIPP09681 153 aaPredicted RBP11.65□□□□□ -0.55
VSTM4-202ENST00000332853 FBXO4Q9UKT5 387 aa11.65□□□□□ -0.55
VSTM4-202ENST00000332853 OR5H15A6NDH6 313 aa11.64□□□□□ -0.55
VSTM4-202ENST00000332853 PYCARD-AS1I3L0S3 204 aa11.64□□□□□ -0.55
VSTM4-202ENST00000332853 SLC17A2O00624 439 aa11.64□□□□□ -0.55
VSTM4-202ENST00000332853 RAB4BP61018 213 aa11.64□□□□□ -0.55
VSTM4-202ENST00000332853 MRPS34P82930 218 aaKnown RBP11.64□□□□□ -0.55
VSTM4-202ENST00000332853 TRA2AQ13595 282 aaKnown RBP eCLIP11.64□□□□□ -0.55
VSTM4-202ENST00000332853 WDR74Q6RFH5 385 aaPredicted RBP11.64□□□□□ -0.55
VSTM4-202ENST00000332853 TFAP2EQ6VUC0 442 aa11.64□□□□□ -0.55
VSTM4-202ENST00000332853 ATG4DQ86TL0 474 aaPredicted RBP11.64□□□□□ -0.55
VSTM4-202ENST00000332853 KIRREL1Q96J84 757 aa11.64□□□□□ -0.55
VSTM4-202ENST00000332853 TINAGL1Q9GZM7 467 aaPredicted RBP11.64□□□□□ -0.55
VSTM4-202ENST00000332853 GFOD1Q9NXC2 390 aa11.64□□□□□ -0.55
VSTM4-202ENST00000332853 ST3GAL6Q9Y274 331 aa11.64□□□□□ -0.55
VSTM4-202ENST00000332853 CCL2P13500 99 aa11.64□□□□□ -0.55
VSTM4-202ENST00000332853 ARPC3O15145 178 aa11.64□□□□□ -0.55
VSTM4-202ENST00000332853 TRAPPC2P0DI81 140 aa11.64□□□□□ -0.55
VSTM4-202ENST00000332853 TRAPPC2BP0DI82 140 aa11.64□□□□□ -0.55
VSTM4-202ENST00000332853 GALNSP34059 522 aa11.64□□□□□ -0.55
VSTM4-202ENST00000332853 MVDP53602 400 aa11.64□□□□□ -0.55
VSTM4-202ENST00000332853 SLC51BQ86UW2 128 aa11.64□□□□□ -0.55
VSTM4-202ENST00000332853 ZDHHC23Q8IYP9 409 aa11.64□□□□□ -0.55
VSTM4-202ENST00000332853 OR6K3Q8NGY3 331 aa11.64□□□□□ -0.55
VSTM4-202ENST00000332853 C4orf45Q96LM5 186 aa11.64□□□□□ -0.55
VSTM4-202ENST00000332853 SLC23A1Q9UHI7 598 aa11.64□□□□□ -0.55
VSTM4-202ENST00000332853 ZNF230Q9UIE0 474 aaPredicted RBP11.64□□□□□ -0.55
VSTM4-202ENST00000332853 PROCRQ9UNN8 238 aa11.64□□□□□ -0.55
VSTM4-202ENST00000332853 A0A1W2PPV4 95 aa11.64□□□□□ -0.55
VSTM4-202ENST00000332853 C20orf196Q8IYI0 205 aa11.64□□□□□ -0.55
VSTM4-202ENST00000332853 OR4A16Q8NH70 328 aa11.64□□□□□ -0.55
VSTM4-202ENST00000332853 HAO2Q9NYQ3 351 aa11.64□□□□□ -0.55
VSTM4-202ENST00000332853 XRCC2O43543 280 aa11.64□□□□□ -0.55
VSTM4-202ENST00000332853 SPINK2P20155 84 aa11.64□□□□□ -0.55
VSTM4-202ENST00000332853 BAXQ07812 192 aa11.64□□□□□ -0.55
VSTM4-202ENST00000332853 C9orf40Q8IXQ3 194 aa11.64□□□□□ -0.55
VSTM4-202ENST00000332853 NPEPL1Q8NDH3 523 aa11.64□□□□□ -0.55
VSTM4-202ENST00000332853 DEFB108BQ8NET1 73 aa11.64□□□□□ -0.55
VSTM4-202ENST00000332853 FAM173AQ9BQD7 235 aa11.64□□□□□ -0.55
VSTM4-202ENST00000332853 MRM2Q9UI43 246 aaKnown RBP11.64□□□□□ -0.55
VSTM4-202ENST00000332853 OIP5O43482 229 aa11.63□□□□□ -0.55
VSTM4-202ENST00000332853 FABP6P51161 128 aa11.63□□□□□ -0.55
VSTM4-202ENST00000332853 ZNF774Q6NX45 483 aa11.63□□□□□ -0.55
VSTM4-202ENST00000332853 LGI3Q8N145 548 aa11.63□□□□□ -0.55
VSTM4-202ENST00000332853 OR1F12Q8NHA8 337 aa11.63□□□□□ -0.55
VSTM4-202ENST00000332853 CT55Q8WUE5 264 aa11.63□□□□□ -0.55
VSTM4-202ENST00000332853 ST8SIA4Q92187 359 aa11.63□□□□□ -0.55
VSTM4-202ENST00000332853 RBMXL1Q96E39 390 aaKnown RBP11.63□□□□□ -0.55
VSTM4-202ENST00000332853 NGBQ9NPG2 151 aa11.63□□□□□ -0.55
VSTM4-202ENST00000332853 OR5V1Q9UGF6 321 aa11.63□□□□□ -0.55
VSTM4-202ENST00000332853 ALDH3B1P43353 468 aa11.63□□□□□ -0.55
VSTM4-202ENST00000332853 MEOX1P50221 254 aa11.63□□□□□ -0.55
VSTM4-202ENST00000332853 ATPAF1Q5TC12 328 aaPredicted RBP11.63□□□□□ -0.55
VSTM4-202ENST00000332853 RASL10BQ96S79 203 aa11.63□□□□□ -0.55
VSTM4-202ENST00000332853 TDRD6O60522 2096 aaKnown RBP11.63□□□□□ -0.55
VSTM4-202ENST00000332853 ZNF732B4DXR9 585 aa11.63□□□□□ -0.55
VSTM4-202ENST00000332853 SERPINA7P05543 415 aa11.63□□□□□ -0.55
VSTM4-202ENST00000332853 FCGR2CP31995 323 aa11.63□□□□□ -0.55
VSTM4-202ENST00000332853 CD300CQ08708 224 aa11.63□□□□□ -0.55
VSTM4-202ENST00000332853 SCCPDHQ8NBX0 429 aa11.63□□□□□ -0.55
VSTM4-202ENST00000332853 COLQQ9Y215 455 aaPredicted RBP11.63□□□□□ -0.55
VSTM4-202ENST00000332853 FLVCR1Q9Y5Y0 555 aa11.63□□□□□ -0.55
VSTM4-202ENST00000332853 NYNRINQ9P2P1 1898 aaKnown RBP11.63□□□□□ -0.55
VSTM4-202ENST00000332853 OR5H14A6NHG9 310 aa11.63□□□□□ -0.55
VSTM4-202ENST00000332853 GCM2O75603 506 aaPredicted RBP11.63□□□□□ -0.55
VSTM4-202ENST00000332853 FUT7Q11130 342 aa11.63□□□□□ -0.55
VSTM4-202ENST00000332853 CDONQ4KMG0 1287 aa11.63□□□□□ -0.55
VSTM4-202ENST00000332853 ZNF468Q5VIY5 522 aaPredicted RBP11.63□□□□□ -0.55
VSTM4-202ENST00000332853 OR10D3Q8NH80 312 aa11.63□□□□□ -0.55
VSTM4-202ENST00000332853 FAM212BQ9NTI7 297 aaPredicted RBP11.63□□□□□ -0.55
VSTM4-202ENST00000332853 EDARQ9UNE0 448 aa11.63□□□□□ -0.55
VSTM4-202ENST00000332853 EPPINO95925 133 aa11.63□□□□□ -0.55
VSTM4-202ENST00000332853 ERGP11308 486 aa11.63□□□□□ -0.55
VSTM4-202ENST00000332853 ECI1P42126 302 aa11.63□□□□□ -0.55
VSTM4-202ENST00000332853 SKP2Q13309 424 aa11.63□□□□□ -0.55
VSTM4-202ENST00000332853 ZNF766Q5HY98 468 aa11.63□□□□□ -0.55
VSTM4-202ENST00000332853 ZNF768Q9H5H4 540 aaKnown RBP11.63□□□□□ -0.55
VSTM4-202ENST00000332853 IL2RAP01589 272 aa11.62□□□□□ -0.55
VSTM4-202ENST00000332853 BRICD5Q6PL45 260 aa11.62□□□□□ -0.55
VSTM4-202ENST00000332853 NLRC3Q7RTR2 1065 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms