RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 IGHV3-7P01780 117 aa12.26□□□□□ -0.45
CHRFAM7A-201ENST00000299847 C9orf50Q5SZB4 431 aa12.26□□□□□ -0.45
CHRFAM7A-201ENST00000299847 Q6ZNX1 250 aa12.26□□□□□ -0.45
CHRFAM7A-201ENST00000299847 MOB3BQ86TA1 216 aa12.26□□□□□ -0.45
CHRFAM7A-201ENST00000299847 LAMA4Q16363 1823 aa12.26□□□□□ -0.45
CHRFAM7A-201ENST00000299847 GALR2O43603 387 aaPredicted RBP12.26□□□□□ -0.45
CHRFAM7A-201ENST00000299847 CT45A10P0DMU9 189 aa12.26□□□□□ -0.45
CHRFAM7A-201ENST00000299847 SLC25A4P12235 298 aa12.26□□□□□ -0.45
CHRFAM7A-201ENST00000299847 BAK1Q16611 211 aa12.26□□□□□ -0.45
CHRFAM7A-201ENST00000299847 MORN4Q8NDC4 146 aa12.26□□□□□ -0.45
CHRFAM7A-201ENST00000299847 FBXO17Q96EF6 278 aa12.26□□□□□ -0.45
CHRFAM7A-201ENST00000299847 KLF13Q9Y2Y9 288 aaPredicted RBP12.26□□□□□ -0.45
CHRFAM7A-201ENST00000299847 SDK1Q7Z5N4 2213 aa12.26□□□□□ -0.45
CHRFAM7A-201ENST00000299847 METTL15P1P0C7V9 234 aa12.25□□□□□ -0.45
CHRFAM7A-201ENST00000299847 ADRA2CP18825 462 aa12.25□□□□□ -0.45
CHRFAM7A-201ENST00000299847 TAGLNQ01995 201 aaKnown RBP12.25□□□□□ -0.45
CHRFAM7A-201ENST00000299847 DPTQ07507 201 aa12.25□□□□□ -0.45
CHRFAM7A-201ENST00000299847 CLN3Q13286 438 aa12.25□□□□□ -0.45
CHRFAM7A-201ENST00000299847 LRRTM1Q86UE6 522 aa12.25□□□□□ -0.45
CHRFAM7A-201ENST00000299847 PTOV1Q86YD1 416 aa12.25□□□□□ -0.45
CHRFAM7A-201ENST00000299847 LRFN3Q9BTN0 628 aa12.25□□□□□ -0.45
CHRFAM7A-201ENST00000299847 SAGE1Q9NXZ1 904 aa12.25□□□□□ -0.45
CHRFAM7A-201ENST00000299847 POLDIP2Q9Y2S7 368 aa12.25□□□□□ -0.45
CHRFAM7A-201ENST00000299847 OR5H15A6NDH6 313 aa12.25□□□□□ -0.45
CHRFAM7A-201ENST00000299847 OR5H1A6NKK0 313 aa12.25□□□□□ -0.45
CHRFAM7A-201ENST00000299847 CEACAM5P06731 702 aa12.25□□□□□ -0.45
CHRFAM7A-201ENST00000299847 CCL2P13500 99 aa12.25□□□□□ -0.45
CHRFAM7A-201ENST00000299847 PPICP45877 212 aa12.25□□□□□ -0.45
CHRFAM7A-201ENST00000299847 H3F3AP84243 136 aa12.25□□□□□ -0.45
CHRFAM7A-201ENST00000299847 ZNF573Q86YE8 665 aa12.25□□□□□ -0.45
CHRFAM7A-201ENST00000299847 FAM26EQ8N5C1 309 aa12.25□□□□□ -0.45
CHRFAM7A-201ENST00000299847 OR1J1Q8NGS3 322 aa12.25□□□□□ -0.45
CHRFAM7A-201ENST00000299847 MPGP29372 298 aa12.25□□□□□ -0.45
CHRFAM7A-201ENST00000299847 SHBQ15464 509 aa12.25□□□□□ -0.45
CHRFAM7A-201ENST00000299847 WIPI1Q5MNZ9 446 aaPredicted RBP12.25□□□□□ -0.45
CHRFAM7A-201ENST00000299847 TMEM230Q96A57 120 aa12.25□□□□□ -0.45
CHRFAM7A-201ENST00000299847 AKR1E2Q96JD6 320 aa12.25□□□□□ -0.45
CHRFAM7A-201ENST00000299847 JAM3Q9BX67 310 aa12.25□□□□□ -0.45
CHRFAM7A-201ENST00000299847 GABARAPL1Q9H0R8 117 aa12.25□□□□□ -0.45
CHRFAM7A-201ENST00000299847 KCNIP2Q9NS61 270 aa12.25□□□□□ -0.45
CHRFAM7A-201ENST00000299847 EGR3Q06889 387 aa12.25□□□□□ -0.45
CHRFAM7A-201ENST00000299847 SP6Q3SY56 376 aa12.25□□□□□ -0.45
CHRFAM7A-201ENST00000299847 Q7L0L9 218 aa12.25□□□□□ -0.45
CHRFAM7A-201ENST00000299847 EXD3Q8N9H8 876 aa12.25□□□□□ -0.45
CHRFAM7A-201ENST00000299847 OR5M8Q8NGP6 311 aa12.25□□□□□ -0.45
CHRFAM7A-201ENST00000299847 TMEM174Q8WUU8 243 aa12.25□□□□□ -0.45
CHRFAM7A-201ENST00000299847 FAM117AQ9C073 453 aa12.25□□□□□ -0.45
CHRFAM7A-201ENST00000299847 TIMM9Q9Y5J7 89 aa12.25□□□□□ -0.45
CHRFAM7A-201ENST00000299847 COX7A2P2O60397 106 aa12.25□□□□□ -0.45
CHRFAM7A-201ENST00000299847 PDGFBP01127 241 aaPredicted RBP12.25□□□□□ -0.45
CHRFAM7A-201ENST00000299847 CRYAAP02489 173 aa12.25□□□□□ -0.45
CHRFAM7A-201ENST00000299847 C1QBP02746 253 aa12.25□□□□□ -0.45
CHRFAM7A-201ENST00000299847 ELFN2Q5R3F8 820 aa12.25□□□□□ -0.45
CHRFAM7A-201ENST00000299847 OR2Z1Q8NG97 314 aa12.25□□□□□ -0.45
CHRFAM7A-201ENST00000299847 IFITM5A6NNB3 132 aa12.24□□□□□ -0.45
CHRFAM7A-201ENST00000299847 TMEM196Q5HYL7 178 aa12.24□□□□□ -0.45
CHRFAM7A-201ENST00000299847 OR5AP2Q8NGF4 316 aa12.24□□□□□ -0.45
CHRFAM7A-201ENST00000299847 ACTR3CQ9C0K3 210 aaPredicted RBP12.24□□□□□ -0.45
CHRFAM7A-201ENST00000299847 SLC6A13Q9NSD5 602 aa12.24□□□□□ -0.45
CHRFAM7A-201ENST00000299847 ZNF391Q9UJN7 358 aa12.24□□□□□ -0.45
CHRFAM7A-201ENST00000299847 FAM96BQ9Y3D0 163 aa12.24□□□□□ -0.45
CHRFAM7A-201ENST00000299847 GOLT1BQ9Y3E0 138 aa12.24□□□□□ -0.45
CHRFAM7A-201ENST00000299847 OPN1MWP04001 364 aa12.24□□□□□ -0.45
CHRFAM7A-201ENST00000299847 OPN1MW2P0DN77 364 aa12.24□□□□□ -0.45
CHRFAM7A-201ENST00000299847 OPN1MW3P0DN78 364 aa12.24□□□□□ -0.45
CHRFAM7A-201ENST00000299847 PSMB6P28072 239 aa12.24□□□□□ -0.45
CHRFAM7A-201ENST00000299847 YBX1P67809 324 aaKnown RBP12.24□□□□□ -0.45
CHRFAM7A-201ENST00000299847 EMC4Q5J8M3 183 aa12.24□□□□□ -0.45
CHRFAM7A-201ENST00000299847 TSEN54Q7Z6J9 526 aaKnown RBP12.24□□□□□ -0.45
CHRFAM7A-201ENST00000299847 RIMKLAQ8IXN7 391 aa12.24□□□□□ -0.45
CHRFAM7A-201ENST00000299847 SMIM19Q96E16 107 aa12.24□□□□□ -0.45
CHRFAM7A-201ENST00000299847 S1PR3Q99500 378 aa12.24□□□□□ -0.45
CHRFAM7A-201ENST00000299847 LRRC61Q9BV99 259 aa12.24□□□□□ -0.45
CHRFAM7A-201ENST00000299847 TERTO14746 1132 aaKnown RBP12.24□□□□□ -0.45
CHRFAM7A-201ENST00000299847 SPINK4O60575 86 aa12.24□□□□□ -0.45
CHRFAM7A-201ENST00000299847 POU2F2P09086 479 aa12.24□□□□□ -0.45
CHRFAM7A-201ENST00000299847 ARRB2P32121 409 aa12.24□□□□□ -0.45
CHRFAM7A-201ENST00000299847 BTG1P62324 171 aa12.24□□□□□ -0.45
CHRFAM7A-201ENST00000299847 ASAH1Q13510 395 aa12.24□□□□□ -0.45
CHRFAM7A-201ENST00000299847 CPEB3Q8NE35 698 aaKnown RBP12.24□□□□□ -0.45
CHRFAM7A-201ENST00000299847 CNRIP1Q96F85 164 aaPredicted RBP12.24□□□□□ -0.45
CHRFAM7A-201ENST00000299847 TXNIPQ9H3M7 391 aa12.24□□□□□ -0.45
CHRFAM7A-201ENST00000299847 LIN7CQ9NUP9 197 aaKnown RBP12.24□□□□□ -0.45
CHRFAM7A-201ENST00000299847 ZNF629Q9UEG4 869 aaPredicted RBP12.24□□□□□ -0.45
CHRFAM7A-201ENST00000299847 STRAPQ9Y3F4 350 aaKnown RBP12.24□□□□□ -0.45
CHRFAM7A-201ENST00000299847 H7BYZ3 331 aa12.24□□□□□ -0.45
CHRFAM7A-201ENST00000299847 OR5H8P0DN80 308 aa12.24□□□□□ -0.45
CHRFAM7A-201ENST00000299847 RPS23P62266 143 aaKnown RBP12.24□□□□□ -0.45
CHRFAM7A-201ENST00000299847 CDK5R1Q15078 307 aa12.24□□□□□ -0.45
CHRFAM7A-201ENST00000299847 SLC24A4Q8NFF2 622 aa12.24□□□□□ -0.45
CHRFAM7A-201ENST00000299847 OR4C16Q8NGL9 310 aa12.24□□□□□ -0.45
CHRFAM7A-201ENST00000299847 OR51I2Q9H344 312 aa12.24□□□□□ -0.45
CHRFAM7A-201ENST00000299847 TREM2Q9NZC2 230 aa12.24□□□□□ -0.45
CHRFAM7A-201ENST00000299847 MGMTP16455 207 aa12.24□□□□□ -0.45
CHRFAM7A-201ENST00000299847 ERHP84090 104 aaKnown RBP12.24□□□□□ -0.45
CHRFAM7A-201ENST00000299847 ZNF528Q3MIS6 628 aa12.24□□□□□ -0.45
CHRFAM7A-201ENST00000299847 NOXO1Q8NFA2 376 aa12.24□□□□□ -0.45
CHRFAM7A-201ENST00000299847 LHX4Q969G2 390 aa12.24□□□□□ -0.45
CHRFAM7A-201ENST00000299847 COMMD5Q9GZQ3 224 aa12.24□□□□□ -0.45
CHRFAM7A-201ENST00000299847 SMOC1Q9H4F8 434 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms