RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 OXA1LQ15070 435 aa10.34□□□□□ -0.75
USP53-201ENST00000274030 OR10Z1Q8NGY1 313 aa10.34□□□□□ -0.75
USP53-201ENST00000274030 RPUSD4Q96CM3 377 aaKnown RBP10.34□□□□□ -0.75
USP53-201ENST00000274030 SPACA9Q96E40 222 aaPredicted RBP10.34□□□□□ -0.75
USP53-201ENST00000274030 ESRP2Q9H6T0 727 aaKnown RBP10.34□□□□□ -0.75
USP53-201ENST00000274030 PRDM7Q9NQW5 492 aa10.34□□□□□ -0.75
USP53-201ENST00000274030 BTAF1O14981 1849 aa10.34□□□□□ -0.75
USP53-201ENST00000274030 ICMTO60725 284 aa10.34□□□□□ -0.75
USP53-201ENST00000274030 HEXAP06865 529 aa10.34□□□□□ -0.75
USP53-201ENST00000274030 PTBP1P26599 531 aaKnown RBP eCLIP10.34□□□□□ -0.751e-6■■■■□ 26.4
USP53-201ENST00000274030 KIR2DL3P43628 341 aa10.34□□□□□ -0.75
USP53-201ENST00000274030 NOVA1P51513 510 aaKnown RBP10.34□□□□□ -0.75
USP53-201ENST00000274030 ELFN2Q5R3F8 820 aa10.34□□□□□ -0.75
USP53-201ENST00000274030 DBX2Q6ZNG2 339 aa10.34□□□□□ -0.75
USP53-201ENST00000274030 CDH26Q8IXH8 852 aa10.34□□□□□ -0.75
USP53-201ENST00000274030 OR2I1PQ8NGU4 316 aa10.34□□□□□ -0.75
USP53-201ENST00000274030 OR4F5Q8NH21 305 aa10.34□□□□□ -0.75
USP53-201ENST00000274030 MAFAQ8NHW3 353 aaPredicted RBP10.34□□□□□ -0.75
USP53-201ENST00000274030 KCNE4Q8WWG9 221 aa10.34□□□□□ -0.75
USP53-201ENST00000274030 OR4F4Q96R69 305 aa10.34□□□□□ -0.75
USP53-201ENST00000274030 KCNIP2Q9NS61 270 aa10.34□□□□□ -0.75
USP53-201ENST00000274030 K7EQM0 130 aa10.34□□□□□ -0.75
USP53-201ENST00000274030 ABCD3P28288 659 aa10.34□□□□□ -0.75
USP53-201ENST00000274030 RPL12P30050 165 aaKnown RBP10.34□□□□□ -0.75
USP53-201ENST00000274030 PMP22Q01453 160 aa10.34□□□□□ -0.75
USP53-201ENST00000274030 FMODQ06828 376 aa10.34□□□□□ -0.75
USP53-201ENST00000274030 MAMSTRQ6ZN01 415 aa10.34□□□□□ -0.75
USP53-201ENST00000274030 ZG16BQ96DA0 208 aa10.34□□□□□ -0.75
USP53-201ENST00000274030 OR7C2O60412 319 aa10.34□□□□□ -0.75
USP53-201ENST00000274030 CTSVO60911 334 aa10.34□□□□□ -0.75
USP53-201ENST00000274030 ADRA2CP18825 462 aa10.34□□□□□ -0.75
USP53-201ENST00000274030 ZNF816Q0VGE8 651 aaPredicted RBP10.34□□□□□ -0.75
USP53-201ENST00000274030 PDZK1IP1Q13113 114 aa10.34□□□□□ -0.75
USP53-201ENST00000274030 SNTB1Q13884 538 aaKnown RBP10.34□□□□□ -0.75
USP53-201ENST00000274030 KIAA0141Q14154 515 aaPredicted RBP10.34□□□□□ -0.75
USP53-201ENST00000274030 INSL4Q14641 139 aa10.34□□□□□ -0.75
USP53-201ENST00000274030 ZNF718Q3SXZ3 478 aa10.34□□□□□ -0.75
USP53-201ENST00000274030 CPEB3Q8NE35 698 aaKnown RBP10.34□□□□□ -0.75
USP53-201ENST00000274030 OR1J1Q8NGS3 322 aa10.34□□□□□ -0.75
USP53-201ENST00000274030 A4GNTQ9UNA3 340 aa10.34□□□□□ -0.75
USP53-201ENST00000274030 C20orf202A1L168 122 aa10.33□□□□□ -0.76
USP53-201ENST00000274030 MKRN2OSH3BPM6 223 aa10.33□□□□□ -0.76
USP53-201ENST00000274030 PPP1R2P9O14990 202 aa10.33□□□□□ -0.76
USP53-201ENST00000274030 GPR37O15354 613 aa10.33□□□□□ -0.76
USP53-201ENST00000274030 GALR2O43603 387 aaPredicted RBP10.33□□□□□ -0.76
USP53-201ENST00000274030 SPRY3O43610 288 aa10.33□□□□□ -0.76
USP53-201ENST00000274030 SOX15O60248 233 aa10.33□□□□□ -0.76
USP53-201ENST00000274030 FOSL1P15407 271 aa10.33□□□□□ -0.76
USP53-201ENST00000274030 OR2V1Q8NHB1 315 aa10.33□□□□□ -0.76
USP53-201ENST00000274030 APH1BQ8WW43 257 aa10.33□□□□□ -0.76
USP53-201ENST00000274030 ST8SIA4Q92187 359 aa10.33□□□□□ -0.76
USP53-201ENST00000274030 MRPS24Q96EL2 167 aaKnown RBP10.33□□□□□ -0.76
USP53-201ENST00000274030 OR2A14Q96R47 310 aa10.33□□□□□ -0.76
USP53-201ENST00000274030 HES7Q9BYE0 225 aa10.33□□□□□ -0.76
USP53-201ENST00000274030 TGIF2Q9GZN2 237 aa10.33□□□□□ -0.76
USP53-201ENST00000274030 SMOC1Q9H4F8 434 aa10.33□□□□□ -0.76
USP53-201ENST00000274030 OCEL1Q9H607 264 aa10.33□□□□□ -0.76
USP53-201ENST00000274030 SIRT5Q9NXA8 310 aa10.33□□□□□ -0.76
USP53-201ENST00000274030 IGHV5-51A0A0C4DH38 117 aa10.33□□□□□ -0.76
USP53-201ENST00000274030 KLK10O43240 276 aa10.33□□□□□ -0.76
USP53-201ENST00000274030 PRDX4Q13162 271 aa10.33□□□□□ -0.76
USP53-201ENST00000274030 EXOSC2Q13868 293 aaKnown RBP10.33□□□□□ -0.76
USP53-201ENST00000274030 PHYHD1Q5SRE7 291 aa10.33□□□□□ -0.76
USP53-201ENST00000274030 NLRC3Q7RTR2 1065 aa10.33□□□□□ -0.76
USP53-201ENST00000274030 OR10G3Q8NGC4 313 aa10.33□□□□□ -0.76
USP53-201ENST00000274030 OR10P1Q8NGE3 313 aa10.33□□□□□ -0.76
USP53-201ENST00000274030 FBXO17Q96EF6 278 aa10.33□□□□□ -0.76
USP53-201ENST00000274030 NARFLQ9H6Q4 476 aa10.33□□□□□ -0.76
USP53-201ENST00000274030 KIAA1456Q9P272 454 aa10.33□□□□□ -0.76
USP53-201ENST00000274030 FZR1Q9UM11 496 aa10.33□□□□□ -0.76
USP53-201ENST00000274030 ICE1Q9Y2F5 2266 aa10.33□□□□□ -0.76
USP53-201ENST00000274030 EPXP11678 715 aa10.33□□□□□ -0.76
USP53-201ENST00000274030 TBPP20226 339 aa10.33□□□□□ -0.76
USP53-201ENST00000274030 FZD2Q14332 565 aa10.33□□□□□ -0.76
USP53-201ENST00000274030 TECTBQ96PL2 329 aa10.33□□□□□ -0.76
USP53-201ENST00000274030 S1PR3Q99500 378 aa10.33□□□□□ -0.76
USP53-201ENST00000274030 NRTNQ99748 197 aa10.33□□□□□ -0.76
USP53-201ENST00000274030 FAM173AQ9BQD7 235 aa10.33□□□□□ -0.76
USP53-201ENST00000274030 COMMD5Q9GZQ3 224 aa10.33□□□□□ -0.76
USP53-201ENST00000274030 C20orf141Q9NUB4 165 aa10.33□□□□□ -0.76
USP53-201ENST00000274030 A0A1B0GUL6 1792 aa10.33□□□□□ -0.76
USP53-201ENST00000274030 BTBD17A6NE02 478 aa10.33□□□□□ -0.76
USP53-201ENST00000274030 OR2F2O95006 317 aa10.33□□□□□ -0.76
USP53-201ENST00000274030 PXDC1Q5TGL8 231 aa10.33□□□□□ -0.76
USP53-201ENST00000274030 TMEM215Q68D42 235 aa10.33□□□□□ -0.76
USP53-201ENST00000274030 ACOT7LQ6ZUV0 252 aa10.33□□□□□ -0.76
USP53-201ENST00000274030 YIPF6Q96EC8 236 aa10.33□□□□□ -0.76
USP53-201ENST00000274030 IP6K3Q96PC2 410 aa10.33□□□□□ -0.76
USP53-201ENST00000274030 ZNF331Q9NQX6 463 aaPredicted RBP10.33□□□□□ -0.76
USP53-201ENST00000274030 ASPDHA6ND91 283 aa10.32□□□□□ -0.76
USP53-201ENST00000274030 UMAD1C9J7I0 102 aa10.32□□□□□ -0.76
USP53-201ENST00000274030 DTYMKP23919 212 aa10.32□□□□□ -0.76
USP53-201ENST00000274030 ZNF239Q16600 458 aaKnown RBP10.32□□□□□ -0.76
USP53-201ENST00000274030 HIST2H3AQ71DI3 136 aa10.32□□□□□ -0.76
USP53-201ENST00000274030 UBE3DQ7Z6J8 389 aa10.32□□□□□ -0.76
USP53-201ENST00000274030 C20orf196Q8IYI0 205 aa10.32□□□□□ -0.76
USP53-201ENST00000274030 OR4C16Q8NGL9 310 aa10.32□□□□□ -0.76
USP53-201ENST00000274030 RTN4IP1Q8WWV3 396 aaPredicted RBP10.32□□□□□ -0.76
USP53-201ENST00000274030 LHX4Q969G2 390 aa10.32□□□□□ -0.76
USP53-201ENST00000274030 OR6C68A6NDL8 312 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms