RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 SRRQ9GZT4 340 aa13.83□□□□□ -0.2
TIMP3-201ENST00000266085 RPS10P5Q9NQ39 176 aa13.83□□□□□ -0.2
TIMP3-201ENST00000266085 CRYABP02511 175 aaKnown RBP13.83□□□□□ -0.2
TIMP3-201ENST00000266085 MGMTP16455 207 aa13.83□□□□□ -0.2
TIMP3-201ENST00000266085 EMP3P54852 163 aa13.83□□□□□ -0.2
TIMP3-201ENST00000266085 SLC37A1P57057 533 aa13.83□□□□□ -0.2
TIMP3-201ENST00000266085 FUT7Q11130 342 aa13.83□□□□□ -0.2
TIMP3-201ENST00000266085 SLC22A25Q6T423 547 aa13.83□□□□□ -0.2
TIMP3-201ENST00000266085 ZDHHC23Q8IYP9 409 aa13.83□□□□□ -0.2
TIMP3-201ENST00000266085 SUMF2Q8NBJ7 301 aa13.83□□□□□ -0.2
TIMP3-201ENST00000266085 DEFB108BQ8NET1 73 aa13.83□□□□□ -0.2
TIMP3-201ENST00000266085 BOD1Q96IK1 185 aa13.83□□□□□ -0.2
TIMP3-201ENST00000266085 C10orf90Q96M02 699 aa13.83□□□□□ -0.2
TIMP3-201ENST00000266085 ZNF2Q9BSG1 426 aaPredicted RBP13.83□□□□□ -0.2
TIMP3-201ENST00000266085 SLIRPQ9GZT3 109 aaKnown RBP13.83□□□□□ -0.2
TIMP3-201ENST00000266085 PRDM6Q9NQX0 595 aa13.83□□□□□ -0.2
TIMP3-201ENST00000266085 SPAARA0A1B0GVQ0 90 aa13.82□□□□□ -0.2
TIMP3-201ENST00000266085 SMLR1H3BR10 107 aa13.82□□□□□ -0.2
TIMP3-201ENST00000266085 SH2D1BO14796 132 aa13.82□□□□□ -0.2
TIMP3-201ENST00000266085 ENSAO43768 121 aaKnown RBP13.82□□□□□ -0.2
TIMP3-201ENST00000266085 CD3DP04234 171 aa13.82□□□□□ -0.2
TIMP3-201ENST00000266085 ALDH3B1P43353 468 aa13.82□□□□□ -0.2
TIMP3-201ENST00000266085 MEOX1P50221 254 aa13.82□□□□□ -0.2
TIMP3-201ENST00000266085 RAB4BP61018 213 aa13.82□□□□□ -0.2
TIMP3-201ENST00000266085 MC2RQ01718 297 aa13.82□□□□□ -0.2
TIMP3-201ENST00000266085 CLINT1Q14677 625 aa13.82□□□□□ -0.2
TIMP3-201ENST00000266085 AADACL4Q5VUY2 407 aa13.82□□□□□ -0.2
TIMP3-201ENST00000266085 DEGS2Q6QHC5 323 aa13.82□□□□□ -0.2
TIMP3-201ENST00000266085 GCNT2Q8N0V5 402 aa13.82□□□□□ -0.2
TIMP3-201ENST00000266085 OR8D4Q8NGM9 314 aa13.82□□□□□ -0.2
TIMP3-201ENST00000266085 PIKFYVEQ9Y2I7 2098 aa13.82□□□□□ -0.2
TIMP3-201ENST00000266085 SDK2Q58EX2 2172 aa13.82□□□□□ -0.2
TIMP3-201ENST00000266085 ZNF816-ZNF321PA0A0X1KG74 233 aa13.82□□□□□ -0.2
TIMP3-201ENST00000266085 PLPP2O43688 288 aa13.82□□□□□ -0.2
TIMP3-201ENST00000266085 TBPP20226 339 aa13.82□□□□□ -0.2
TIMP3-201ENST00000266085 HAAOP46952 286 aa13.82□□□□□ -0.2
TIMP3-201ENST00000266085 RAC1P63000 192 aa13.82□□□□□ -0.2
TIMP3-201ENST00000266085 ZNF266Q14584 549 aa13.82□□□□□ -0.2
TIMP3-201ENST00000266085 OR52W1Q6IF63 320 aa13.82□□□□□ -0.2
TIMP3-201ENST00000266085 ZNF321PQ8N8H1 164 aa13.82□□□□□ -0.2
TIMP3-201ENST00000266085 LILRB4Q8NHJ6 448 aa13.82□□□□□ -0.2
TIMP3-201ENST00000266085 SMIM4Q8WVI0 70 aa13.82□□□□□ -0.2
TIMP3-201ENST00000266085 CNTNAP3Q9BZ76 1288 aa13.82□□□□□ -0.2
TIMP3-201ENST00000266085 HEYLQ9NQ87 328 aaPredicted RBP13.82□□□□□ -0.2
TIMP3-201ENST00000266085 IGKV1-8A0A0C4DH67 115 aa13.82□□□□□ -0.2
TIMP3-201ENST00000266085 PTAFRP25105 342 aa13.82□□□□□ -0.2
TIMP3-201ENST00000266085 CDKN2AP42771 156 aaKnown RBP13.82□□□□□ -0.2
TIMP3-201ENST00000266085 RAD52P43351 418 aa13.82□□□□□ -0.2
TIMP3-201ENST00000266085 ZNF92Q03936 586 aa13.82□□□□□ -0.2
TIMP3-201ENST00000266085 C1QL3Q5VWW1 255 aa13.82□□□□□ -0.2
TIMP3-201ENST00000266085 HSD17B11Q8NBQ5 300 aa13.82□□□□□ -0.2
TIMP3-201ENST00000266085 C1orf196B1AJZ1 125 aa13.81□□□□□ -0.2
TIMP3-201ENST00000266085 CCSO14618 274 aa13.81□□□□□ -0.2
TIMP3-201ENST00000266085 ST8SIA3O43173 380 aa13.81□□□□□ -0.2
TIMP3-201ENST00000266085 AGFG1P52594 562 aaKnown RBP13.81□□□□□ -0.2
TIMP3-201ENST00000266085 OR2A2Q6IF42 318 aa13.81□□□□□ -0.2
TIMP3-201ENST00000266085 CPEB3Q8NE35 698 aaKnown RBP13.81□□□□□ -0.2
TIMP3-201ENST00000266085 OR4D11Q8NGI4 311 aa13.81□□□□□ -0.2
TIMP3-201ENST00000266085 OR1F12Q8NHA8 337 aa13.81□□□□□ -0.2
TIMP3-201ENST00000266085 APOBEC3DQ96AK3 386 aaPredicted RBP13.81□□□□□ -0.2
TIMP3-201ENST00000266085 C4orf45Q96LM5 186 aa13.81□□□□□ -0.2
TIMP3-201ENST00000266085 PRELID1Q9Y255 219 aa13.81□□□□□ -0.2
TIMP3-201ENST00000266085 ST3GAL6Q9Y274 331 aa13.81□□□□□ -0.2
TIMP3-201ENST00000266085 ATP23Q9Y6H3 246 aa13.81□□□□□ -0.2
TIMP3-201ENST00000266085 SPTAN1Q13813 2472 aaKnown RBP13.81□□□□□ -0.2
TIMP3-201ENST00000266085 ANKRD33BA6NCL7 494 aa13.81□□□□□ -0.2
TIMP3-201ENST00000266085 RAB1AP62820 205 aa13.81□□□□□ -0.2
TIMP3-201ENST00000266085 FAAP20Q6NZ36 180 aa13.81□□□□□ -0.2
TIMP3-201ENST00000266085 GFRALQ6UXV0 394 aa13.81□□□□□ -0.2
TIMP3-201ENST00000266085 CREB3L2Q70SY1 520 aa13.81□□□□□ -0.2
TIMP3-201ENST00000266085 ARHGEF39Q8N4T4 335 aa13.81□□□□□ -0.2
TIMP3-201ENST00000266085 KISS1RQ969F8 398 aaPredicted RBP13.81□□□□□ -0.2
TIMP3-201ENST00000266085 LTBP1Q14766 1721 aa13.81□□□□□ -0.2
TIMP3-201ENST00000266085 FAM221AA4D161 298 aa13.81□□□□□ -0.2
TIMP3-201ENST00000266085 WDR1O75083 606 aa13.81□□□□□ -0.2
TIMP3-201ENST00000266085 WNT1P04628 370 aa13.81□□□□□ -0.2
TIMP3-201ENST00000266085 GALP22466 123 aa13.81□□□□□ -0.2
TIMP3-201ENST00000266085 SRD5A2P31213 254 aa13.81□□□□□ -0.2
TIMP3-201ENST00000266085 S100A12P80511 92 aa13.81□□□□□ -0.2
TIMP3-201ENST00000266085 BAK1Q16611 211 aa13.81□□□□□ -0.2
TIMP3-201ENST00000266085 WDR38Q5JTN6 314 aa13.81□□□□□ -0.2
TIMP3-201ENST00000266085 JMJD6Q6NYC1 403 aaPredicted RBP13.81□□□□□ -0.2
TIMP3-201ENST00000266085 PTPMT1Q8WUK0 201 aaPredicted RBP13.81□□□□□ -0.2
TIMP3-201ENST00000266085 USB1Q9BQ65 265 aaKnown RBP13.81□□□□□ -0.2
TIMP3-201ENST00000266085 KIF13BQ9NQT8 1826 aa13.81□□□□□ -0.2
TIMP3-201ENST00000266085 BRCA1P38398 1863 aaKnown RBP13.81□□□□□ -0.2
TIMP3-201ENST00000266085 MEIKINA0A087WXM9 373 aa13.81□□□□□ -0.2
TIMP3-201ENST00000266085 TCRBV16S1A1N1A0A5B0 115 aa13.81□□□□□ -0.2
TIMP3-201ENST00000266085 GIPP09681 153 aaPredicted RBP13.81□□□□□ -0.2
TIMP3-201ENST00000266085 GNB3P16520 340 aa13.81□□□□□ -0.2
TIMP3-201ENST00000266085 GLRA1P23415 457 aa13.81□□□□□ -0.2
TIMP3-201ENST00000266085 FOXL2P58012 376 aa13.81□□□□□ -0.2
TIMP3-201ENST00000266085 EIF2S3LQ2VIR3 472 aaKnown RBP13.81□□□□□ -0.2
TIMP3-201ENST00000266085 TMEM217Q8N7C4 229 aa13.81□□□□□ -0.2
TIMP3-201ENST00000266085 OR51A4Q8NGJ6 313 aa13.81□□□□□ -0.2
TIMP3-201ENST00000266085 OR10D3Q8NH80 312 aa13.81□□□□□ -0.2
TIMP3-201ENST00000266085 RNF141Q8WVD5 230 aa13.81□□□□□ -0.2
TIMP3-201ENST00000266085 AUNIPQ9H7T9 357 aa13.81□□□□□ -0.2
TIMP3-201ENST00000266085 OR2M5A3KFT3 312 aa13.8□□□□□ -0.2
TIMP3-201ENST00000266085 M0R1B8 84 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms