RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 Olfr418A0A140T8J6 310 aa10.46□□□□□ -0.73
Ccdc28b-202ENSMUST00000106035 Gm13083A2AGW5 501 aa10.46□□□□□ -0.73
Ccdc28b-202ENSMUST00000106035 H2-M5A7VMS3 348 aa10.46□□□□□ -0.73
Ccdc28b-202ENSMUST00000106035 Mup4P11590 178 aa10.46□□□□□ -0.73
Ccdc28b-202ENSMUST00000106035 Rps6ka3P18654 740 aaKnown RBP10.46□□□□□ -0.73
Ccdc28b-202ENSMUST00000106035 Bmi1P25916 324 aa10.46□□□□□ -0.73
Ccdc28b-202ENSMUST00000106035 Taf1aP97357 453 aa10.46□□□□□ -0.73
Ccdc28b-202ENSMUST00000106035 Pax8Q00288 457 aa10.46□□□□□ -0.73
Ccdc28b-202ENSMUST00000106035 Ikzf1Q03267 517 aa10.46□□□□□ -0.73
Ccdc28b-202ENSMUST00000106035 Gdpgp1Q3TLS3 386 aa10.46□□□□□ -0.73
Ccdc28b-202ENSMUST00000106035 Gm10645Q3UPY1 145 aa10.46□□□□□ -0.73
Ccdc28b-202ENSMUST00000106035 CstbQ62426 98 aaKnown RBP10.46□□□□□ -0.73
Ccdc28b-202ENSMUST00000106035 Actr3bQ641P0 418 aa10.46□□□□□ -0.73
Ccdc28b-202ENSMUST00000106035 Egfl8Q6GUQ1 293 aa10.46□□□□□ -0.73
Ccdc28b-202ENSMUST00000106035 Smarcd3Q6P9Z1 483 aa10.46□□□□□ -0.73
Ccdc28b-202ENSMUST00000106035 Eci3Q78JN3 317 aa10.46□□□□□ -0.73
Ccdc28b-202ENSMUST00000106035 Olfr17Q7TRM9 315 aa10.46□□□□□ -0.73
Ccdc28b-202ENSMUST00000106035 Map6Q7TSJ2 906 aa10.46□□□□□ -0.73
Ccdc28b-202ENSMUST00000106035 Cpeb2Q812E0 521 aaKnown RBP10.46□□□□□ -0.73
Ccdc28b-202ENSMUST00000106035 SynprQ8BGN8 265 aa10.46□□□□□ -0.73
Ccdc28b-202ENSMUST00000106035 Cggbp1Q8BHG9 167 aaKnown RBP10.46□□□□□ -0.73
Ccdc28b-202ENSMUST00000106035 Kcnk10Q8BUW1 535 aa10.46□□□□□ -0.73
Ccdc28b-202ENSMUST00000106035 Nhlrc2Q8BZW8 725 aa10.46□□□□□ -0.73
Ccdc28b-202ENSMUST00000106035 Rbm14Q8C2Q3 669 aaKnown RBP10.46□□□□□ -0.73
Ccdc28b-202ENSMUST00000106035 Olfr497Q8VG08 314 aa10.46□□□□□ -0.73
Ccdc28b-202ENSMUST00000106035 Olfr1351Q8VGU6 319 aa10.46□□□□□ -0.73
Ccdc28b-202ENSMUST00000106035 Olfr980Q8VH08 310 aa10.46□□□□□ -0.73
Ccdc28b-202ENSMUST00000106035 Tmem19Q91W52 336 aa10.46□□□□□ -0.73
Ccdc28b-202ENSMUST00000106035 Errfi1Q99JZ7 461 aa10.46□□□□□ -0.73
Ccdc28b-202ENSMUST00000106035 Abcg5Q99PE8 652 aa10.46□□□□□ -0.73
Ccdc28b-202ENSMUST00000106035 Mansc1Q9CR33 414 aa10.46□□□□□ -0.73
Ccdc28b-202ENSMUST00000106035 4933400A11RikQ9CR52 288 aa10.46□□□□□ -0.73
Ccdc28b-202ENSMUST00000106035 Actr6Q9D864 396 aa10.46□□□□□ -0.73
Ccdc28b-202ENSMUST00000106035 Spata25Q9DA57 226 aa10.46□□□□□ -0.73
Ccdc28b-202ENSMUST00000106035 FcrlsQ9EQY5 509 aa10.46□□□□□ -0.73
Ccdc28b-202ENSMUST00000106035 Prss8Q9ESD1 342 aa10.46□□□□□ -0.73
Ccdc28b-202ENSMUST00000106035 Zdhhc16Q9ESG8 361 aa10.46□□□□□ -0.73
Ccdc28b-202ENSMUST00000106035 CompQ9R0G6 755 aa10.46□□□□□ -0.73
Ccdc28b-202ENSMUST00000106035 Khdrbs3Q9R226 346 aaKnown RBP10.46□□□□□ -0.73
Ccdc28b-202ENSMUST00000106035 Oasl2Q9Z2F2 508 aa10.46□□□□□ -0.73
Ccdc28b-202ENSMUST00000106035 Igkv4-80A0A075B5L7 116 aa10.45□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 Zfp433A0A0J9YUD4 600 aa10.45□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 Gm32687A0A1W2P6H7 600 aa10.45□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 Gm17093F6XGJ4 214 aa10.45□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 Gm8888J3QPX5 126 aa10.45□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 Gm3115L7N285 211 aa10.45□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 LckP06240 509 aa10.45□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 Fcer1aP20489 250 aa10.45□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 Wnt5aP22725 380 aa10.45□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 Rfx3P48381 749 aa10.45□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 Crabp1P62965 137 aa10.45□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 Serpinf1P97298 417 aa10.45□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 Klhl21Q3U410 597 aa10.45□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 Gm8773Q3UQ24 132 aa10.45□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 PiglQ5SX19 252 aa10.45□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 Flot2Q60634 428 aaKnown RBP10.45□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 Olfr776Q7TRI3 312 aa10.45□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 Olfr285Q7TS17 319 aa10.45□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 Acsm5Q8BGA8 578 aa10.45□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 D330020A13RikQ8C799 211 aa10.45□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 Faim2Q8K097 317 aa10.45□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 Olfr361Q8VF16 322 aa10.45□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 Olfr1043Q8VFK4 314 aa10.45□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 Olfr307Q8VFN8 313 aa10.45□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 Olfr483Q8VG05 315 aa10.45□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 Pcdhgc3Q91XX1 934 aa10.45□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 Prmt3Q922H1 532 aa10.45□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 Tram2Q924Z5 370 aa10.45□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 Itgb3bpQ9CQ82 176 aa10.45□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 Nkiras2Q9CR56 191 aa10.45□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 GmfgQ9ERL7 142 aa10.45□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 Wisp2Q9Z0G4 251 aa10.45□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 Spin2-ps6A0A140T8V2 174 aa10.44□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 Gm10250G3X9L6 160 aaKnown RBP10.44□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 Vmn1r57K7N731 310 aa10.44□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 P20040 264 aa10.44□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 Slc30a2Q2HJ10 371 aa10.44□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 Dnaaf3Q3UYV8 586 aa10.44□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 Prss44Q402U7 372 aa10.44□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 Snx33Q4VAA7 574 aa10.44□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 Olfr5Q60889 312 aa10.44□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 Prss43Q76HL1 382 aa10.44□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 Uhrf2Q7TMI3 803 aa10.44□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 Olfr1014Q7TR95 305 aa10.44□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 Olfr1013Q7TR96 305 aa10.44□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 Klhl42Q8BFQ9 493 aa10.44□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 Tctn1Q8BZ64 593 aa10.44□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 PigwQ8C398 503 aa10.44□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 Sdhaf2Q8C6I2 164 aa10.44□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 Defb10Q8R2I8 73 aa10.44□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 Mfsd6lQ8R3N2 586 aa10.44□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 Prpf19Q99KP6 504 aaKnown RBP10.44□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 CenpmQ9CQA0 180 aa10.44□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 Rsph14Q9D3W1 341 aa10.44□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 Slc48a1Q9D8M3 146 aa10.44□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 Rbmxl2Q9DAE2 385 aaKnown RBP10.44□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 SmpxQ9DC77 85 aa10.44□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 Atp5hQ9DCX2 161 aa10.44□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 Ube4bQ9ES00 1173 aa10.44□□□□□ -0.74
Ccdc28b-202ENSMUST00000106035 ClpxQ9JHS4 634 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 39.8 ms