RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 MED6O75586 246 aa3.03□□□□□ -1.92
CPNE3-213ENST00000622183 CTDNEP1O95476 244 aa3.03□□□□□ -1.92
CPNE3-213ENST00000622183 MBP02144 154 aa3.03□□□□□ -1.92
CPNE3-213ENST00000622183 CATP04040 527 aaKnown RBP3.03□□□□□ -1.92
CPNE3-213ENST00000622183 IGFBP3P17936 291 aaPredicted RBP3.03□□□□□ -1.92
CPNE3-213ENST00000622183 MYL9P24844 172 aa3.03□□□□□ -1.92
CPNE3-213ENST00000622183 AP1S2P56377 157 aa3.03□□□□□ -1.92
CPNE3-213ENST00000622183 CARD18P57730 90 aa3.03□□□□□ -1.92
CPNE3-213ENST00000622183 KRTAP12-2P59991 146 aa3.03□□□□□ -1.92
CPNE3-213ENST00000622183 SLAQ13239 276 aa3.03□□□□□ -1.92
CPNE3-213ENST00000622183 ZNF829Q3KNS6 432 aaPredicted RBP3.03□□□□□ -1.92
CPNE3-213ENST00000622183 SMUG1Q53HV7 270 aa3.03□□□□□ -1.92
CPNE3-213ENST00000622183 HSP90AA4PQ58FG1 418 aa3.03□□□□□ -1.92
CPNE3-213ENST00000622183 MLIPQ5VWP3 458 aa3.03□□□□□ -1.92
CPNE3-213ENST00000622183 Q6ZR03 302 aa3.03□□□□□ -1.92
CPNE3-213ENST00000622183 SLC35D2Q76EJ3 337 aa3.03□□□□□ -1.92
CPNE3-213ENST00000622183 SNX20Q7Z614 316 aa3.03□□□□□ -1.92
CPNE3-213ENST00000622183 WDR86Q86TI4 376 aa3.03□□□□□ -1.92
CPNE3-213ENST00000622183 GPR26Q8NDV2 337 aa3.03□□□□□ -1.92
CPNE3-213ENST00000622183 OR8U1Q8NH10 309 aa3.03□□□□□ -1.92
CPNE3-213ENST00000622183 OR10G6Q8NH81 332 aa3.03□□□□□ -1.92
CPNE3-213ENST00000622183 ZNF382Q96SR6 550 aa3.03□□□□□ -1.92
CPNE3-213ENST00000622183 SAMD10Q9BYL1 202 aa3.03□□□□□ -1.92
CPNE3-213ENST00000622183 RGS18Q9NS28 235 aa3.03□□□□□ -1.92
CPNE3-213ENST00000622183 ZNF355PQ9NSJ1 428 aa3.03□□□□□ -1.92
CPNE3-213ENST00000622183 TSSC4Q9Y5U2 329 aaPredicted RBP3.03□□□□□ -1.92
CPNE3-213ENST00000622183 TMEM14AQ9Y6G1 99 aa3.03□□□□□ -1.92
CPNE3-213ENST00000622183 PIKFYVEQ9Y2I7 2098 aa3.02□□□□□ -1.93
CPNE3-213ENST00000622183 TNIKQ9UKE5 1360 aa3.02□□□□□ -1.93
CPNE3-213ENST00000622183 IGHV1OR15-9A0A0B4J2B8 117 aa3.02□□□□□ -1.93
CPNE3-213ENST00000622183 LOC100653049A0A140TA62 436 aa3.02□□□□□ -1.93
CPNE3-213ENST00000622183 TMEM223A0PJW6 202 aa3.02□□□□□ -1.93
CPNE3-213ENST00000622183 CENPXA8MT69 81 aa3.02□□□□□ -1.93
CPNE3-213ENST00000622183 H3BN98 237 aa3.02□□□□□ -1.93
CPNE3-213ENST00000622183 BPY2O14599 106 aa3.02□□□□□ -1.93
CPNE3-213ENST00000622183 SOCS1O15524 211 aa3.02□□□□□ -1.93
CPNE3-213ENST00000622183 KRT34O76011 436 aa3.02□□□□□ -1.93
CPNE3-213ENST00000622183 SLC22A5O76082 557 aa3.02□□□□□ -1.93
CPNE3-213ENST00000622183 TGM6O95932 706 aa3.02□□□□□ -1.93
CPNE3-213ENST00000622183 OR8U9P0C7N5 309 aa3.02□□□□□ -1.93
CPNE3-213ENST00000622183 TCP1P17987 556 aaKnown RBP3.02□□□□□ -1.93
CPNE3-213ENST00000622183 HTR1DP28221 377 aa3.02□□□□□ -1.93
CPNE3-213ENST00000622183 ANP32AP39687 249 aaKnown RBP3.02□□□□□ -1.93
CPNE3-213ENST00000622183 CSKP41240 450 aa3.02□□□□□ -1.93
CPNE3-213ENST00000622183 NDUFA8P51970 172 aa3.02□□□□□ -1.93
CPNE3-213ENST00000622183 GFERP55789 205 aa3.02□□□□□ -1.93
CPNE3-213ENST00000622183 RPL23P62829 140 aaKnown RBP3.02□□□□□ -1.93
CPNE3-213ENST00000622183 PTGES3Q15185 160 aaKnown RBP3.02□□□□□ -1.93
CPNE3-213ENST00000622183 TFDP3Q5H9I0 405 aa3.02□□□□□ -1.93
CPNE3-213ENST00000622183 Q5W150 140 aa3.02□□□□□ -1.93
CPNE3-213ENST00000622183 FBXO36Q8NEA4 188 aa3.02□□□□□ -1.93
CPNE3-213ENST00000622183 MITD1Q8WV92 249 aa3.02□□□□□ -1.93
CPNE3-213ENST00000622183 RCN3Q96D15 328 aa3.02□□□□□ -1.93
CPNE3-213ENST00000622183 NARS2Q96I59 477 aaKnown RBP3.02□□□□□ -1.93
CPNE3-213ENST00000622183 SCGB3A2Q96PL1 93 aa3.02□□□□□ -1.93
CPNE3-213ENST00000622183 OR52D1Q9H346 318 aa3.02□□□□□ -1.93
CPNE3-213ENST00000622183 GPATCH8Q9UKJ3 1502 aaKnown RBP3.02□□□□□ -1.93
CPNE3-213ENST00000622183 IGSF9BQ9UPX0 1349 aa3.01□□□□□ -1.93
CPNE3-213ENST00000622183 SMIM26A0A096LP01 95 aa3.01□□□□□ -1.93
CPNE3-213ENST00000622183 TRAV19A0A0A6YYK7 116 aa3.01□□□□□ -1.93
CPNE3-213ENST00000622183 ZNF705GA8MUZ8 300 aaPredicted RBP3.01□□□□□ -1.93
CPNE3-213ENST00000622183 KRTAP9-6A8MVA2 160 aa3.01□□□□□ -1.93
CPNE3-213ENST00000622183 RAD51BO15315 384 aa3.01□□□□□ -1.93
CPNE3-213ENST00000622183 ZNF207O43670 478 aaKnown RBP3.01□□□□□ -1.93
CPNE3-213ENST00000622183 RAD1O60671 282 aa3.01□□□□□ -1.93
CPNE3-213ENST00000622183 SLC19A2O60779 497 aa3.01□□□□□ -1.93
CPNE3-213ENST00000622183 REM1O75628 298 aa3.01□□□□□ -1.93
CPNE3-213ENST00000622183 APCSP02743 223 aa3.01□□□□□ -1.93
CPNE3-213ENST00000622183 STAG3L2P0CL84 134 aa3.01□□□□□ -1.93
CPNE3-213ENST00000622183 CD70P32970 193 aa3.01□□□□□ -1.93
CPNE3-213ENST00000622183 MYCNOSP40205 109 aa3.01□□□□□ -1.93
CPNE3-213ENST00000622183 TAS2R39P59534 338 aa3.01□□□□□ -1.93
CPNE3-213ENST00000622183 OR2B8PP59922 312 aa3.01□□□□□ -1.93
CPNE3-213ENST00000622183 PFN3P60673 137 aa3.01□□□□□ -1.93
CPNE3-213ENST00000622183 CDK5Q00535 292 aa3.01□□□□□ -1.93
CPNE3-213ENST00000622183 EBI3Q14213 229 aa3.01□□□□□ -1.93
CPNE3-213ENST00000622183 STK38Q15208 465 aa3.01□□□□□ -1.93
CPNE3-213ENST00000622183 STK11Q15831 433 aa3.01□□□□□ -1.93
CPNE3-213ENST00000622183 HNRNPA1L2Q32P51 320 aaKnown RBP3.01□□□□□ -1.93
CPNE3-213ENST00000622183 ZNF691Q5VV52 312 aa3.01□□□□□ -1.93
CPNE3-213ENST00000622183 NANOGP8Q6NSW7 305 aa3.01□□□□□ -1.93
CPNE3-213ENST00000622183 SLC16A13Q7RTY0 426 aa3.01□□□□□ -1.93
CPNE3-213ENST00000622183 OR2W3Q7Z3T1 314 aa3.01□□□□□ -1.93
CPNE3-213ENST00000622183 OR51L1Q8NGJ5 315 aa3.01□□□□□ -1.93
CPNE3-213ENST00000622183 OR6N1Q8NGY5 312 aa3.01□□□□□ -1.93
CPNE3-213ENST00000622183 UBALD1Q8TB05 177 aa3.01□□□□□ -1.93
CPNE3-213ENST00000622183 TCP10LQ8TDR4 215 aa3.01□□□□□ -1.93
CPNE3-213ENST00000622183 ASZ1Q8WWH4 475 aa3.01□□□□□ -1.93
CPNE3-213ENST00000622183 FLYWCH2Q96CP2 140 aaKnown RBP3.01□□□□□ -1.93
CPNE3-213ENST00000622183 TEAD3Q99594 435 aa3.01□□□□□ -1.93
CPNE3-213ENST00000622183 ZNF430Q9H8G1 570 aaPredicted RBP3.01□□□□□ -1.93
CPNE3-213ENST00000622183 REEP1Q9H902 201 aa3.01□□□□□ -1.93
CPNE3-213ENST00000622183 RRAGDQ9NQL2 400 aaPredicted RBP3.01□□□□□ -1.93
CPNE3-213ENST00000622183 IFNKQ9P0W0 207 aa3.01□□□□□ -1.93
CPNE3-213ENST00000622183 ZMAT5Q9UDW3 170 aaKnown RBP3.01□□□□□ -1.93
CPNE3-213ENST00000622183 YTHDF2Q9Y5A9 579 aaKnown RBP3.01□□□□□ -1.93
CPNE3-213ENST00000622183 UBIAD1Q9Y5Z9 338 aa3.01□□□□□ -1.93
CPNE3-213ENST00000622183 KPTNQ9Y664 436 aa3.01□□□□□ -1.93
CPNE3-213ENST00000622183 A0A1W2PRF3 423 aa3□□□□□ -1.93
CPNE3-213ENST00000622183 A0A1W2PRM7 423 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms