RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 IMPAD1Q9NX62 359 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 RHCGQ9UBD6 479 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 A4GNTQ9UNA3 340 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 FAM32AQ9Y421 112 aaKnown RBP6.64□□□□□ -1.35
CLK1-215ENST00000621181 PEX16Q9Y5Y5 336 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 DNAJC9-AS1A6NH13 148 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 TBX1O43435 398 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 OR6A2O95222 327 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 PTTG1O95997 202 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 PRKAR1BP31321 381 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 ZNF81P51508 661 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 UCP2P55851 309 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 IL13RA1P78552 427 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 PLP2Q04941 152 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 TMEM53Q6P2H8 277 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 PTCHD4Q6ZW05 846 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 LINC00528Q8N1L1 170 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 CPEB3Q8NE35 698 aaKnown RBP6.64□□□□□ -1.35
CLK1-215ENST00000621181 OR6S1Q8NH40 331 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 GTF3AQ92664 365 aaKnown RBP6.64□□□□□ -1.35
CLK1-215ENST00000621181 SLC25A28Q96A46 364 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 ELMOD3Q96FG2 381 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 CHCHD6Q9BRQ6 235 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 C1QTNF5Q9BXJ0 243 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 BARHL1Q9BZE3 327 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 C1orf198Q9H425 327 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 TMEM27Q9HBJ8 222 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 BCL2L10Q9HD36 194 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 ABCB10Q9NRK6 738 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 MRPL39Q9NYK5 338 aaKnown RBP6.64□□□□□ -1.35
CLK1-215ENST00000621181 GLTPQ9NZD2 209 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 TESQ9UGI8 421 aaKnown RBP6.64□□□□□ -1.35
CLK1-215ENST00000621181 OPN4Q9UHM6 478 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 CLEC2DQ9UHP7 191 aa6.64□□□□□ -1.35
CLK1-215ENST00000621181 PAIP2BQ9ULR5 123 aaKnown RBP6.64□□□□□ -1.35
CLK1-215ENST00000621181 WNK1Q9H4A3 2382 aa6.63□□□□□ -1.35
CLK1-215ENST00000621181 A0A0G2JK05 382 aa6.63□□□□□ -1.35
CLK1-215ENST00000621181 LOC100506127A0A0U1RQW1 187 aa6.63□□□□□ -1.35
CLK1-215ENST00000621181 IQCMA0A1B0GVH7 501 aa6.63□□□□□ -1.35
CLK1-215ENST00000621181 A0A1W2PRQ8 180 aa6.63□□□□□ -1.35
CLK1-215ENST00000621181 PLSCR5A0PG75 271 aa6.63□□□□□ -1.35
CLK1-215ENST00000621181 LRRN3E7EW58 273 aa6.63□□□□□ -1.35
CLK1-215ENST00000621181 CCRL2O00421 344 aa6.63□□□□□ -1.35
CLK1-215ENST00000621181 PLPP3O14495 311 aa6.63□□□□□ -1.35
CLK1-215ENST00000621181 SPRY3O43610 288 aa6.63□□□□□ -1.35
CLK1-215ENST00000621181 FSHBP01225 129 aa6.63□□□□□ -1.35
CLK1-215ENST00000621181 BGLAPP02818 100 aa6.63□□□□□ -1.35
CLK1-215ENST00000621181 H1F0P07305 194 aaKnown RBP6.63□□□□□ -1.35
CLK1-215ENST00000621181 MAKP20794 623 aa6.63□□□□□ -1.35
CLK1-215ENST00000621181 CCNOP22674 350 aa6.63□□□□□ -1.35
CLK1-215ENST00000621181 ZFP36P26651 326 aaKnown RBP6.63□□□□□ -1.35
CLK1-215ENST00000621181 EIF2B2P49770 351 aaKnown RBP6.63□□□□□ -1.35
CLK1-215ENST00000621181 RGS8P57771 180 aaPredicted RBP6.63□□□□□ -1.35
CLK1-215ENST00000621181 SLC3A1Q07837 685 aa6.63□□□□□ -1.35
CLK1-215ENST00000621181 SLC36A2Q495M3 483 aa6.63□□□□□ -1.35
CLK1-215ENST00000621181 FAM209AQ5JX71 171 aa6.63□□□□□ -1.35
CLK1-215ENST00000621181 WDR88Q6ZMY6 472 aa6.63□□□□□ -1.35
CLK1-215ENST00000621181 GDPGP1Q6ZNW5 385 aa6.63□□□□□ -1.35
CLK1-215ENST00000621181 DPPA2Q7Z7J5 298 aa6.63□□□□□ -1.35
CLK1-215ENST00000621181 KRT73Q86Y46 540 aa6.63□□□□□ -1.35
CLK1-215ENST00000621181 NANOGP1Q8N7R0 232 aa6.63□□□□□ -1.35
CLK1-215ENST00000621181 OR4K5Q8NGD3 323 aa6.63□□□□□ -1.35
CLK1-215ENST00000621181 OR1J2Q8NGS2 313 aa6.63□□□□□ -1.35
CLK1-215ENST00000621181 OR5J2Q8NH18 312 aa6.63□□□□□ -1.35
CLK1-215ENST00000621181 OR6X1Q8NH79 312 aa6.63□□□□□ -1.35
CLK1-215ENST00000621181 SLC7A13Q8TCU3 470 aa6.63□□□□□ -1.35
CLK1-215ENST00000621181 GPA33Q99795 319 aa6.63□□□□□ -1.35
CLK1-215ENST00000621181 SPATA5L1Q9BVQ7 753 aa6.63□□□□□ -1.35
CLK1-215ENST00000621181 ZMAT3Q9HA38 289 aaKnown RBP6.63□□□□□ -1.35
CLK1-215ENST00000621181 MRPS18AQ9NVS2 196 aaKnown RBP6.63□□□□□ -1.35
CLK1-215ENST00000621181 TMEM38BQ9NVV0 291 aa6.63□□□□□ -1.35
CLK1-215ENST00000621181 PGPEP1Q9NXJ5 209 aa6.63□□□□□ -1.35
CLK1-215ENST00000621181 PURGQ9UJV8 347 aaKnown RBP6.63□□□□□ -1.35
CLK1-215ENST00000621181 SLC13A4Q9UKG4 626 aa6.63□□□□□ -1.35
CLK1-215ENST00000621181 NUP50Q9UKX7 468 aa6.63□□□□□ -1.35
CLK1-215ENST00000621181 CAB39Q9Y376 341 aaPredicted RBP6.63□□□□□ -1.35
CLK1-215ENST00000621181 VWFP04275 2813 aa6.62□□□□□ -1.35
CLK1-215ENST00000621181 A0A0B4J2E0 115 aa6.62□□□□□ -1.35
CLK1-215ENST00000621181 A0A1B0GX12 115 aa6.62□□□□□ -1.35
CLK1-215ENST00000621181 CTDSP2O14595 271 aa6.62□□□□□ -1.35
CLK1-215ENST00000621181 TPST2O60704 377 aa6.62□□□□□ -1.35
CLK1-215ENST00000621181 FOXH1O75593 365 aa6.62□□□□□ -1.35
CLK1-215ENST00000621181 MT-ATP6P00846 226 aa6.62□□□□□ -1.35
CLK1-215ENST00000621181 GCH1P30793 250 aa6.62□□□□□ -1.35
CLK1-215ENST00000621181 APLNRP35414 380 aa6.62□□□□□ -1.35
CLK1-215ENST00000621181 RPS19P39019 145 aaKnown RBP6.62□□□□□ -1.35
CLK1-215ENST00000621181 ZNF91Q05481 1191 aa6.62□□□□□ -1.35
CLK1-215ENST00000621181 BAMBIQ13145 260 aa6.62□□□□□ -1.35
CLK1-215ENST00000621181 OR1Q1Q15612 314 aa6.62□□□□□ -1.35
CLK1-215ENST00000621181 KCNJ8Q15842 424 aa6.62□□□□□ -1.35
CLK1-215ENST00000621181 TIMM50Q3ZCQ8 353 aa6.62□□□□□ -1.35
CLK1-215ENST00000621181 ENTPD8Q5MY95 495 aa6.62□□□□□ -1.35
CLK1-215ENST00000621181 SLC35D2Q76EJ3 337 aa6.62□□□□□ -1.35
CLK1-215ENST00000621181 DOK3Q7L591 496 aa6.62□□□□□ -1.35
CLK1-215ENST00000621181 SLC16A14Q7RTX9 510 aa6.62□□□□□ -1.35
CLK1-215ENST00000621181 ZER1Q7Z7L7 766 aa6.62□□□□□ -1.35
CLK1-215ENST00000621181 RANBP3LQ86VV4 465 aaPredicted RBP6.62□□□□□ -1.35
CLK1-215ENST00000621181 PROKR2Q8NFJ6 384 aa6.62□□□□□ -1.35
CLK1-215ENST00000621181 OR8J1Q8NGP2 316 aa6.62□□□□□ -1.35
CLK1-215ENST00000621181 OR1J1Q8NGS3 322 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms