RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 ZNF879B4DU55 563 aa12.36□□□□□ -0.43
CTSA-216ENST00000607212 LGALS8O00214 317 aa12.36□□□□□ -0.43
CTSA-216ENST00000607212 TIMM23O14925 209 aa12.36□□□□□ -0.43
CTSA-216ENST00000607212 TXNDC12O95881 172 aa12.36□□□□□ -0.43
CTSA-216ENST00000607212 GRPP07492 148 aa12.36□□□□□ -0.43
CTSA-216ENST00000607212 CD200P41217 278 aa12.36□□□□□ -0.43
CTSA-216ENST00000607212 GATA4P43694 442 aa12.36□□□□□ -0.43
CTSA-216ENST00000607212 BPIFB3P59826 476 aa12.36□□□□□ -0.43
CTSA-216ENST00000607212 HIST1H3AP68431 136 aa12.36□□□□□ -0.43
CTSA-216ENST00000607212 DBPQ10586 325 aaPredicted RBP12.36□□□□□ -0.43
CTSA-216ENST00000607212 SEC23BQ15437 767 aa12.36□□□□□ -0.43
CTSA-216ENST00000607212 TAF13Q15543 124 aa12.36□□□□□ -0.43
CTSA-216ENST00000607212 HIST2H3PS2Q5TEC6 136 aa12.36□□□□□ -0.43
CTSA-216ENST00000607212 HIST2H3AQ71DI3 136 aa12.36□□□□□ -0.43
CTSA-216ENST00000607212 NAA40Q86UY6 237 aa12.36□□□□□ -0.43
CTSA-216ENST00000607212 PDZD9Q8IXQ8 264 aa12.36□□□□□ -0.43
CTSA-216ENST00000607212 OR6V1Q8N148 313 aa12.36□□□□□ -0.43
CTSA-216ENST00000607212 PNLDC1Q8NA58 520 aaKnown RBP12.36□□□□□ -0.43
CTSA-216ENST00000607212 SDR9C7Q8NEX9 313 aa12.36□□□□□ -0.43
CTSA-216ENST00000607212 TBC1D15Q8TC07 691 aa12.36□□□□□ -0.43
CTSA-216ENST00000607212 Q8TCH9 128 aa12.36□□□□□ -0.43
CTSA-216ENST00000607212 SLC22A4Q9H015 551 aa12.36□□□□□ -0.43
CTSA-216ENST00000607212 OR52D1Q9H346 318 aa12.36□□□□□ -0.43
CTSA-216ENST00000607212 C1orf123Q9NWV4 160 aa12.36□□□□□ -0.43
CTSA-216ENST00000607212 C1RLQ9NZP8 487 aa12.36□□□□□ -0.43
CTSA-216ENST00000607212 SAMD4AQ9UPU9 718 aaKnown RBP12.36□□□□□ -0.43
CTSA-216ENST00000607212 TRAV38-1A0A0B4J264 116 aa12.35□□□□□ -0.43
CTSA-216ENST00000607212 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.35□□□□□ -0.43
CTSA-216ENST00000607212 CLPSL1A2RUU4 121 aa12.35□□□□□ -0.43
CTSA-216ENST00000607212 M0R135 149 aa12.35□□□□□ -0.43
CTSA-216ENST00000607212 OR10H3O60404 316 aa12.35□□□□□ -0.43
CTSA-216ENST00000607212 CCDC22O60826 627 aa12.35□□□□□ -0.43
CTSA-216ENST00000607212 GADD45GO95257 159 aa12.35□□□□□ -0.43
CTSA-216ENST00000607212 GYPAP02724 150 aa12.35□□□□□ -0.43
CTSA-216ENST00000607212 LIPFP07098 398 aa12.35□□□□□ -0.43
CTSA-216ENST00000607212 MELTFP08582 738 aa12.35□□□□□ -0.43
CTSA-216ENST00000607212 HIST1H1CP16403 213 aaKnown RBP12.35□□□□□ -0.43
CTSA-216ENST00000607212 SMIM11AP58511 58 aa12.35□□□□□ -0.43
CTSA-216ENST00000607212 HOXA4Q00056 320 aaPredicted RBP12.35□□□□□ -0.43
CTSA-216ENST00000607212 PDCD1Q15116 288 aa12.35□□□□□ -0.43
CTSA-216ENST00000607212 RFX4Q33E94 735 aa12.35□□□□□ -0.43
CTSA-216ENST00000607212 CLEC12AQ5QGZ9 265 aa12.35□□□□□ -0.43
CTSA-216ENST00000607212 GLYATQ6IB77 296 aa12.35□□□□□ -0.43
CTSA-216ENST00000607212 ZNF620Q6ZNG0 422 aa12.35□□□□□ -0.43
CTSA-216ENST00000607212 SLC26A10Q8NG04 563 aa12.35□□□□□ -0.43
CTSA-216ENST00000607212 SSMEM1Q8WWF3 244 aa12.35□□□□□ -0.43
CTSA-216ENST00000607212 ST8SIA4Q92187 359 aa12.35□□□□□ -0.43
CTSA-216ENST00000607212 DACT3Q96B18 629 aaPredicted RBP12.35□□□□□ -0.43
CTSA-216ENST00000607212 ZNF799Q96GE5 643 aa12.35□□□□□ -0.43
CTSA-216ENST00000607212 TRIM15Q9C019 465 aa12.35□□□□□ -0.43
CTSA-216ENST00000607212 RASSF4Q9H2L5 321 aa12.35□□□□□ -0.43
CTSA-216ENST00000607212 TRIM36Q9NQ86 728 aa12.35□□□□□ -0.43
CTSA-216ENST00000607212 ACOXLQ9NUZ1 547 aa12.35□□□□□ -0.43
CTSA-216ENST00000607212 ADA2Q9NZK5 511 aa12.35□□□□□ -0.43
CTSA-216ENST00000607212 NDUFAF4Q9P032 175 aa12.35□□□□□ -0.43
CTSA-216ENST00000607212 PDP1Q9P0J1 537 aaPredicted RBP12.35□□□□□ -0.43
CTSA-216ENST00000607212 RNF114Q9Y508 228 aa12.35□□□□□ -0.43
CTSA-216ENST00000607212 MEGF8Q7Z7M0 2845 aa12.34□□□□□ -0.43
CTSA-216ENST00000607212 OOEPA6NGQ2 149 aa12.34□□□□□ -0.43
CTSA-216ENST00000607212 CD300LBA8K4G0 201 aa12.34□□□□□ -0.43
CTSA-216ENST00000607212 FSTL3O95633 263 aa12.34□□□□□ -0.43
CTSA-216ENST00000607212 FXYD6P3P58550 94 aa12.34□□□□□ -0.43
CTSA-216ENST00000607212 PSME3P61289 254 aa12.34□□□□□ -0.43
CTSA-216ENST00000607212 MZT1Q08AG7 82 aa12.34□□□□□ -0.43
CTSA-216ENST00000607212 SLC35F1Q5T1Q4 408 aa12.34□□□□□ -0.43
CTSA-216ENST00000607212 ZNF841Q6ZN19 808 aa12.34□□□□□ -0.43
CTSA-216ENST00000607212 COLCA1Q6ZS62 124 aa12.34□□□□□ -0.43
CTSA-216ENST00000607212 TSEN54Q7Z6J9 526 aaKnown RBP12.34□□□□□ -0.43
CTSA-216ENST00000607212 TMEM86BQ8N661 226 aa12.34□□□□□ -0.43
CTSA-216ENST00000607212 PROKR2Q8NFJ6 384 aa12.34□□□□□ -0.43
CTSA-216ENST00000607212 OR2AE1Q8NHA4 323 aa12.34□□□□□ -0.43
CTSA-216ENST00000607212 MCUR1Q96AQ8 359 aa12.34□□□□□ -0.43
CTSA-216ENST00000607212 WDFY2Q96P53 400 aa12.34□□□□□ -0.43
CTSA-216ENST00000607212 COPS4Q9BT78 406 aa12.34□□□□□ -0.43
CTSA-216ENST00000607212 CTSZQ9UBR2 303 aa12.34□□□□□ -0.43
CTSA-216ENST00000607212 FAM96BQ9Y3D0 163 aa12.34□□□□□ -0.43
CTSA-216ENST00000607212 POMT1Q9Y6A1 747 aa12.34□□□□□ -0.43
CTSA-216ENST00000607212 CENPVL3A0A0U1RRI6 287 aa12.33□□□□□ -0.44
CTSA-216ENST00000607212 GMDSO60547 372 aa12.33□□□□□ -0.44
CTSA-216ENST00000607212 NDUFA7O95182 113 aa12.33□□□□□ -0.44
CTSA-216ENST00000607212 PYCR1P32322 319 aa12.33□□□□□ -0.44
CTSA-216ENST00000607212 IFNGR2P38484 337 aa12.33□□□□□ -0.44
CTSA-216ENST00000607212 PSMB10P40306 273 aa12.33□□□□□ -0.44
CTSA-216ENST00000607212 ARF6P62330 175 aa12.33□□□□□ -0.44
CTSA-216ENST00000607212 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.33□□□□□ -0.44
CTSA-216ENST00000607212 POU4F2Q12837 409 aa12.33□□□□□ -0.44
CTSA-216ENST00000607212 RSPO1Q2MKA7 263 aaPredicted RBP12.33□□□□□ -0.44
CTSA-216ENST00000607212 OR52L1Q8NGH7 329 aa12.33□□□□□ -0.44
CTSA-216ENST00000607212 OR4C15Q8NGM1 316 aa12.33□□□□□ -0.44
CTSA-216ENST00000607212 OR8S1Q8NH09 359 aa12.33□□□□□ -0.44
CTSA-216ENST00000607212 TBX15Q96SF7 602 aa12.33□□□□□ -0.44
CTSA-216ENST00000607212 MMP27Q9H306 513 aa12.33□□□□□ -0.44
CTSA-216ENST00000607212 MED4Q9NPJ6 270 aa12.33□□□□□ -0.44
CTSA-216ENST00000607212 ONECUT1Q9UBC0 465 aa12.33□□□□□ -0.44
CTSA-216ENST00000607212 TRRAPQ9Y4A5 3859 aa12.32□□□□□ -0.44
CTSA-216ENST00000607212 IGHV3OR15-7A0A075B7D8 119 aa12.32□□□□□ -0.44
CTSA-216ENST00000607212 IGHV1-69DA0A0B4J2H0 117 aa12.32□□□□□ -0.44
CTSA-216ENST00000607212 BTBD17A6NE02 478 aa12.32□□□□□ -0.44
CTSA-216ENST00000607212 TVP23AA6NH52 213 aa12.32□□□□□ -0.44
CTSA-216ENST00000607212 TNFRSF13BO14836 293 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms