RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 ZNF84P51523 738 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 CRYBB1P53674 252 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 FXYD6P3P58550 94 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 RBX1P62877 108 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 NKX6-1P78426 367 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 H3F3AP84243 136 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 B4GALNT1Q00973 533 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 MEF2AQ02078 507 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 TLE4Q04727 773 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 SHHQ15465 462 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 UPP1Q16831 310 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 SCGB2B2Q4G0G5 96 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 GAGE13Q4V321 117 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 TMEM35AQ53FP2 167 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 HIKESHIQ53FT3 197 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 ACTBL2Q562R1 376 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 BEX5Q5H9J7 111 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 ALG10BQ5I7T1 473 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 PRAMEF17Q5VTA0 474 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 OR2A2Q6IF42 318 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 FBXW12Q6X9E4 464 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 WDR88Q6ZMY6 472 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 GDF7Q7Z4P5 450 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 SLC35E3Q7Z769 313 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 CENPVQ7Z7K6 275 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 CATSPERDQ86XM0 798 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 TMEM183AQ8IXX5 376 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 RNF175Q8N4F7 328 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 FRMD1Q8N878 549 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 ZNF614Q8N883 585 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 ZSCAN4Q8NAM6 433 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 NOXO1Q8NFA2 376 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 OR6J1Q8NGC5 347 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 OR9K2Q8NGE7 335 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 OR52L1Q8NGH7 329 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 OR5AK3PQ8NH89 298 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 FIBINQ8TAL6 211 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 STT3BQ8TCJ2 826 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 MRGPRDQ8TDS7 321 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 METTL21AQ8WXB1 218 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 TIFAQ96CG3 184 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 MS4A6EQ96DS6 147 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 ARSGQ96EG1 525 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 ACY3Q96HD9 319 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 SEC22AQ96IW7 307 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 SLC35G5Q96KT7 338 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 PACRGQ96M98 296 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 PRAP1Q96NZ9 151 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 SCGB3A2Q96PL1 93 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 IMMP2LQ96T52 175 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 GPHA2Q96T91 129 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 FOXB1Q99853 325 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 PRSS27Q9BQR3 290 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 GINS3Q9BRX5 216 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 ZNF2Q9BSG1 426 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 RAB33BQ9H082 229 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 SLC25A31Q9H0C2 315 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 SLC26A1Q9H2B4 701 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 OR51B6Q9H340 312 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 OR52D1Q9H346 318 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 PRO1933Q9H354 126 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 RIMS4Q9H426 269 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 MTHFD2LQ9H903 347 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 TAF9BQ9HBM6 251 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 CDH20Q9HBT6 801 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 SPACA1Q9HBV2 294 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 PDE7BQ9NP56 450 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 LHX3Q9UBR4 397 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 OR14J1Q9UGF5 321 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 APOBEC3BQ9UH17 382 aaKnown RBP3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 CRLS1Q9UJA2 301 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 SLC25A13Q9UJS0 675 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 OSGIN2Q9Y236 505 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 FARSAQ9Y285 508 aaKnown RBP3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 SIGLEC7Q9Y286 467 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 MRPS33Q9Y291 106 aaKnown RBP3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 ASF1AQ9Y294 204 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 NOP16Q9Y3C1 178 aaKnown RBP3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 CSAG2Q9Y5P2 127 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 SLCO1B1Q9Y6L6 691 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 TICRRQ7Z2Z1 1910 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 THSD7AQ9UPZ6 1657 aa3.62□□□□□ -1.83
HMGB1P50-201ENST00000605814 SCN5AQ14524 2016 aa3.61□□□□□ -1.83
HMGB1P50-201ENST00000605814 PCSK5Q92824 1860 aa3.61□□□□□ -1.83
HMGB1P50-201ENST00000605814 TRAV18A0A075B6X5 111 aa3.61□□□□□ -1.83
HMGB1P50-201ENST00000605814 A0A087WZY1 265 aa3.61□□□□□ -1.83
HMGB1P50-201ENST00000605814 A0A0D9SEW6 157 aa3.61□□□□□ -1.83
HMGB1P50-201ENST00000605814 KIR2DL5BA0A0G2JN68 375 aa3.61□□□□□ -1.83
HMGB1P50-201ENST00000605814 KIR2DL5BA0A0G2JPC4 375 aa3.61□□□□□ -1.83
HMGB1P50-201ENST00000605814 A0A0U1RQV5 110 aa3.61□□□□□ -1.83
HMGB1P50-201ENST00000605814 A6NCN8 305 aa3.61□□□□□ -1.83
HMGB1P50-201ENST00000605814 NKX6-3A6NJ46 265 aa3.61□□□□□ -1.83
HMGB1P50-201ENST00000605814 DUXAA6NLW8 204 aa3.61□□□□□ -1.83
HMGB1P50-201ENST00000605814 RIIAD1A6NNX1 92 aa3.61□□□□□ -1.83
HMGB1P50-201ENST00000605814 ZNF736B4DX44 427 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P50-201ENST00000605814 UMAD1C9J7I0 102 aa3.61□□□□□ -1.83
HMGB1P50-201ENST00000605814 PPP5D1E7EU14 171 aa3.61□□□□□ -1.83
HMGB1P50-201ENST00000605814 M0R036 132 aa3.61□□□□□ -1.83
HMGB1P50-201ENST00000605814 DCTN6O00399 190 aa3.61□□□□□ -1.83
HMGB1P50-201ENST00000605814 SLC17A2O00624 439 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms