RNA–Protein interactions for RNA: ENST00000597995.1

TRIM28-212, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-212ENST00000597995 OR8B3Q8NGG8 313 aa10.44□□□□□ -0.74
TRIM28-212ENST00000597995 OR10S1Q8NGN2 331 aa10.44□□□□□ -0.74
TRIM28-212ENST00000597995 OR4F5Q8NH21 305 aa10.44□□□□□ -0.74
TRIM28-212ENST00000597995 ZNF420Q8TAQ5 688 aaPredicted RBP10.44□□□□□ -0.74
TRIM28-212ENST00000597995 TAF15Q92804 592 aaKnown RBP eCLIP10.44□□□□□ -0.74
TRIM28-212ENST00000597995 ZDHHC16Q969W1 377 aa10.44□□□□□ -0.74
TRIM28-212ENST00000597995 APOBEC3DQ96AK3 386 aaPredicted RBP10.44□□□□□ -0.74
TRIM28-212ENST00000597995 ZNF582Q96NG8 517 aaPredicted RBP10.44□□□□□ -0.74
TRIM28-212ENST00000597995 OR8B2Q96RD0 313 aa10.44□□□□□ -0.74
TRIM28-212ENST00000597995 SLC30A2Q9BRI3 323 aa10.44□□□□□ -0.74
TRIM28-212ENST00000597995 MUC13Q9H3R2 512 aa10.44□□□□□ -0.74
TRIM28-212ENST00000597995 MAGIXQ9H6Y5 334 aa10.44□□□□□ -0.74
TRIM28-212ENST00000597995 NOX4Q9NPH5 578 aa10.44□□□□□ -0.74
TRIM28-212ENST00000597995 PNRC2Q9NPJ4 139 aaKnown RBP10.44□□□□□ -0.74
TRIM28-212ENST00000597995 IL20Q9NYY1 176 aa10.44□□□□□ -0.74
TRIM28-212ENST00000597995 CDH10Q9Y6N8 788 aa10.44□□□□□ -0.74
TRIM28-212ENST00000597995 WNK1Q9H4A3 2382 aa10.43□□□□□ -0.74
TRIM28-212ENST00000597995 MDFIC2A0A1B0GVS7 189 aa10.43□□□□□ -0.74
TRIM28-212ENST00000597995 A0A1B0GWJ7 208 aa10.43□□□□□ -0.74
TRIM28-212ENST00000597995 FAM181BA6NEQ2 426 aa10.43□□□□□ -0.74
TRIM28-212ENST00000597995 IQCF6A8MYZ5 107 aa10.43□□□□□ -0.74
TRIM28-212ENST00000597995 NDUFA7O95182 113 aa10.43□□□□□ -0.74
TRIM28-212ENST00000597995 ZNF205O95201 554 aa10.43□□□□□ -0.74
TRIM28-212ENST00000597995 CYB5R3P00387 301 aaPredicted RBP10.43□□□□□ -0.74
TRIM28-212ENST00000597995 RENP00797 406 aa10.43□□□□□ -0.74
TRIM28-212ENST00000597995 OMGP23515 440 aa10.43□□□□□ -0.74
TRIM28-212ENST00000597995 NOS3P29474 1203 aa10.43□□□□□ -0.74
TRIM28-212ENST00000597995 PITPNBP48739 271 aa10.43□□□□□ -0.74
TRIM28-212ENST00000597995 HLXQ14774 488 aaPredicted RBP10.43□□□□□ -0.74
TRIM28-212ENST00000597995 OR2T5Q6IEZ7 315 aa10.43□□□□□ -0.74
TRIM28-212ENST00000597995 OR2T2Q6IF00 324 aa10.43□□□□□ -0.74
TRIM28-212ENST00000597995 LYPD4Q6UWN0 246 aa10.43□□□□□ -0.74
TRIM28-212ENST00000597995 Q6YL49 198 aa10.43□□□□□ -0.74
TRIM28-212ENST00000597995 C17orf107Q6ZR85 190 aa10.43□□□□□ -0.74
TRIM28-212ENST00000597995 RASSF6Q6ZTQ3 369 aa10.43□□□□□ -0.74
TRIM28-212ENST00000597995 NAA40Q86UY6 237 aa10.43□□□□□ -0.74
TRIM28-212ENST00000597995 ADGRG5Q8IZF4 528 aa10.43□□□□□ -0.74
TRIM28-212ENST00000597995 TMEM86BQ8N661 226 aa10.43□□□□□ -0.74
TRIM28-212ENST00000597995 CYB561A3Q8NBI2 242 aa10.43□□□□□ -0.74
TRIM28-212ENST00000597995 AQP11Q8NBQ7 271 aa10.43□□□□□ -0.74
TRIM28-212ENST00000597995 GJC3Q8NFK1 279 aa10.43□□□□□ -0.74
TRIM28-212ENST00000597995 OR10AD1Q8NGE0 317 aa10.43□□□□□ -0.74
TRIM28-212ENST00000597995 OR2T29Q8NH02 315 aa10.43□□□□□ -0.74
TRIM28-212ENST00000597995 OR4Q3Q8NH05 313 aa10.43□□□□□ -0.74
TRIM28-212ENST00000597995 WFDC12Q8WWY7 111 aa10.43□□□□□ -0.74
TRIM28-212ENST00000597995 FAM71F1Q96KD3 344 aaPredicted RBP10.43□□□□□ -0.74
TRIM28-212ENST00000597995 COQ7Q99807 217 aa10.43□□□□□ -0.74
TRIM28-212ENST00000597995 NUDT16L1Q9BRJ7 211 aaKnown RBP10.43□□□□□ -0.74
TRIM28-212ENST00000597995 PTTG3PQ9NZH4 202 aa10.43□□□□□ -0.74
TRIM28-212ENST00000597995 CLN8Q9UBY8 286 aa10.43□□□□□ -0.74
TRIM28-212ENST00000597995 CYB5R1Q9UHQ9 305 aa10.43□□□□□ -0.74
TRIM28-212ENST00000597995 PRPF19Q9UMS4 504 aaKnown RBP10.43□□□□□ -0.74
TRIM28-212ENST00000597995 POLR1DQ9Y2S0 133 aa10.43□□□□□ -0.74
TRIM28-212ENST00000597995 U3KQV3 271 aa10.43□□□□□ -0.74
TRIM28-212ENST00000597995 H0YL77 283 aa10.42□□□□□ -0.74
TRIM28-212ENST00000597995 PHYHO14832 338 aa10.42□□□□□ -0.74
TRIM28-212ENST00000597995 CCNB2O95067 398 aa10.42□□□□□ -0.74
TRIM28-212ENST00000597995 SELEP16581 610 aa10.42□□□□□ -0.74
TRIM28-212ENST00000597995 ANOS1P23352 680 aa10.42□□□□□ -0.74
TRIM28-212ENST00000597995 PYCR1P32322 319 aa10.42□□□□□ -0.74
TRIM28-212ENST00000597995 PMELP40967 661 aa10.42□□□□□ -0.74
TRIM28-212ENST00000597995 RPS27P42677 84 aaKnown RBP10.42□□□□□ -0.74
TRIM28-212ENST00000597995 GATA4P43694 442 aa10.42□□□□□ -0.74
TRIM28-212ENST00000597995 RAG2P55895 527 aa10.42□□□□□ -0.74
TRIM28-212ENST00000597995 RPL15P61313 204 aaKnown RBP10.42□□□□□ -0.74
TRIM28-212ENST00000597995 MICAQ29983 383 aa10.42□□□□□ -0.74
TRIM28-212ENST00000597995 GPR157Q5UAW9 335 aa10.42□□□□□ -0.74
TRIM28-212ENST00000597995 WDR25Q64LD2 544 aaPredicted RBP10.42□□□□□ -0.74
TRIM28-212ENST00000597995 OLFML2AQ68BL7 652 aa10.42□□□□□ -0.74
TRIM28-212ENST00000597995 PGM2L1Q6PCE3 622 aa10.42□□□□□ -0.74
TRIM28-212ENST00000597995 DCDC5Q6ZRR9 648 aa10.42□□□□□ -0.74
TRIM28-212ENST00000597995 COLCA1Q6ZS62 124 aa10.42□□□□□ -0.74
TRIM28-212ENST00000597995 TMEM179BQ7Z7N9 219 aa10.42□□□□□ -0.74
TRIM28-212ENST00000597995 MOGAT3Q86VF5 341 aa10.42□□□□□ -0.74
TRIM28-212ENST00000597995 LINC00471Q8N535 108 aa10.42□□□□□ -0.74
TRIM28-212ENST00000597995 KIR3DL3Q8N743 410 aa10.42□□□□□ -0.74
TRIM28-212ENST00000597995 CELF2-AS1Q8N7Q2 184 aa10.42□□□□□ -0.74
TRIM28-212ENST00000597995 SLC37A3Q8NCC5 494 aa10.42□□□□□ -0.74
TRIM28-212ENST00000597995 ERGIC1Q969X5 290 aa10.42□□□□□ -0.74
TRIM28-212ENST00000597995 CCDC124Q96CT7 223 aaKnown RBP10.42□□□□□ -0.74
TRIM28-212ENST00000597995 ASB9Q96DX5 294 aa10.42□□□□□ -0.74
TRIM28-212ENST00000597995 MAP6Q96JE9 813 aa10.42□□□□□ -0.74
TRIM28-212ENST00000597995 CITED1Q99966 193 aa10.42□□□□□ -0.74
TRIM28-212ENST00000597995 HDHD2Q9H0R4 259 aa10.42□□□□□ -0.74
TRIM28-212ENST00000597995 C1orf21Q9H246 121 aa10.42□□□□□ -0.74
TRIM28-212ENST00000597995 TMEM100Q9NV29 134 aa10.42□□□□□ -0.74
TRIM28-212ENST00000597995 C1RLQ9NZP8 487 aa10.42□□□□□ -0.74
TRIM28-212ENST00000597995 PDP1Q9P0J1 537 aaPredicted RBP10.42□□□□□ -0.74
TRIM28-212ENST00000597995 POMT1Q9Y6A1 747 aa10.42□□□□□ -0.74
TRIM28-212ENST00000597995 CLPSL1A2RUU4 121 aa10.41□□□□□ -0.74
TRIM28-212ENST00000597995 TVP23AA6NH52 213 aa10.41□□□□□ -0.74
TRIM28-212ENST00000597995 F5H5P2 479 aa10.41□□□□□ -0.74
TRIM28-212ENST00000597995 M0QZ24 198 aa10.41□□□□□ -0.74
TRIM28-212ENST00000597995 TIMM23O14925 209 aa10.41□□□□□ -0.74
TRIM28-212ENST00000597995 MLNRO43193 412 aa10.41□□□□□ -0.74
TRIM28-212ENST00000597995 ENSAO43768 121 aaKnown RBP10.41□□□□□ -0.74
TRIM28-212ENST00000597995 SOX14O95416 240 aa10.41□□□□□ -0.74
TRIM28-212ENST00000597995 LIPFP07098 398 aa10.41□□□□□ -0.74
TRIM28-212ENST00000597995 ACSM4P0C7M7 580 aa10.41□□□□□ -0.74
TRIM28-212ENST00000597995 IRF2P14316 349 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms