RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 CD300LBA8K4G0 201 aa12.65□□□□□ -0.38
LIG1-215ENST00000597901 F5H0A9 414 aaPredicted RBP12.65□□□□□ -0.38
LIG1-215ENST00000597901 H3BN98 237 aa12.65□□□□□ -0.38
LIG1-215ENST00000597901 ZNF3P17036 446 aa12.65□□□□□ -0.38
LIG1-215ENST00000597901 EPHA1P21709 976 aa12.65□□□□□ -0.38
LIG1-215ENST00000597901 ANOS1P23352 680 aa12.65□□□□□ -0.38
LIG1-215ENST00000597901 GRK5P34947 590 aa12.65□□□□□ -0.38
LIG1-215ENST00000597901 SEC61A1P61619 476 aaKnown RBP12.65□□□□□ -0.38
LIG1-215ENST00000597901 ZNF181Q2M3W8 571 aa12.65□□□□□ -0.38
LIG1-215ENST00000597901 MRPL21Q7Z2W9 205 aaKnown RBP12.65□□□□□ -0.38
LIG1-215ENST00000597901 MUC20Q8N307 709 aaPredicted RBP12.65□□□□□ -0.38
LIG1-215ENST00000597901 IQCF1Q8N6M8 205 aa12.65□□□□□ -0.38
LIG1-215ENST00000597901 CELF2-AS1Q8N7Q2 184 aa12.65□□□□□ -0.38
LIG1-215ENST00000597901 OR6K6Q8NGW6 343 aa12.65□□□□□ -0.38
LIG1-215ENST00000597901 TEX47Q8TBZ9 253 aa12.65□□□□□ -0.38
LIG1-215ENST00000597901 ZNF418Q8TF45 676 aaPredicted RBP12.65□□□□□ -0.38
LIG1-215ENST00000597901 SLC7A6OSQ96CW6 309 aaPredicted RBP12.65□□□□□ -0.38
LIG1-215ENST00000597901 COPS4Q9BT78 406 aa12.65□□□□□ -0.38
LIG1-215ENST00000597901 MED20Q9H944 212 aa12.65□□□□□ -0.38
LIG1-215ENST00000597901 N6AMT1Q9Y5N5 214 aa12.65□□□□□ -0.38
LIG1-215ENST00000597901 ARRDC5A6NEK1 342 aa12.64□□□□□ -0.39
LIG1-215ENST00000597901 GGT3PA6NGU5 568 aa12.64□□□□□ -0.39
LIG1-215ENST00000597901 FAM183AA6NL82 134 aa12.64□□□□□ -0.39
LIG1-215ENST00000597901 LRRC30A6NM36 301 aa12.64□□□□□ -0.39
LIG1-215ENST00000597901 CEACAM18A8MTB9 384 aa12.64□□□□□ -0.39
LIG1-215ENST00000597901 FSTL3O95633 263 aa12.64□□□□□ -0.39
LIG1-215ENST00000597901 HOXB6P17509 224 aaKnown RBP12.64□□□□□ -0.39
LIG1-215ENST00000597901 PRKACGP22612 351 aa12.64□□□□□ -0.39
LIG1-215ENST00000597901 CA6P23280 308 aa12.64□□□□□ -0.39
LIG1-215ENST00000597901 CPT2P23786 658 aa12.64□□□□□ -0.39
LIG1-215ENST00000597901 POU1F1P28069 291 aa12.64□□□□□ -0.39
LIG1-215ENST00000597901 CD200P41217 278 aa12.64□□□□□ -0.39
LIG1-215ENST00000597901 GATA4P43694 442 aa12.64□□□□□ -0.39
LIG1-215ENST00000597901 GINS1Q14691 196 aa12.64□□□□□ -0.39
LIG1-215ENST00000597901 DNAL1Q4LDG9 190 aa12.64□□□□□ -0.39
LIG1-215ENST00000597901 FAM201AQ5SY85 155 aa12.64□□□□□ -0.39
LIG1-215ENST00000597901 GLYATL3Q5SZD4 288 aa12.64□□□□□ -0.39
LIG1-215ENST00000597901 SPATC1Q76KD6 591 aa12.64□□□□□ -0.39
LIG1-215ENST00000597901 SPATA24Q86W54 205 aa12.64□□□□□ -0.39
LIG1-215ENST00000597901 DEFB108BQ8NET1 73 aa12.64□□□□□ -0.39
LIG1-215ENST00000597901 OR2AE1Q8NHA4 323 aa12.64□□□□□ -0.39
LIG1-215ENST00000597901 ERGIC1Q969X5 290 aa12.64□□□□□ -0.39
LIG1-215ENST00000597901 OTULINQ96BN8 352 aa12.64□□□□□ -0.39
LIG1-215ENST00000597901 TMEM246Q9BRR3 403 aa12.64□□□□□ -0.39
LIG1-215ENST00000597901 SLC22A4Q9H015 551 aa12.64□□□□□ -0.39
LIG1-215ENST00000597901 PPIAL4AQ9Y536 164 aa12.64□□□□□ -0.39
LIG1-215ENST00000597901 GMDSO60547 372 aa12.63□□□□□ -0.39
LIG1-215ENST00000597901 RGS9O75916 674 aaPredicted RBP12.63□□□□□ -0.39
LIG1-215ENST00000597901 GLCEO94923 617 aa12.63□□□□□ -0.39
LIG1-215ENST00000597901 SLC2A1P11166 492 aa12.63□□□□□ -0.39
LIG1-215ENST00000597901 ZNF12P17014 697 aa12.63□□□□□ -0.39
LIG1-215ENST00000597901 GSTT1P30711 240 aa12.63□□□□□ -0.39
LIG1-215ENST00000597901 SLC15A1P46059 708 aa12.63□□□□□ -0.39
LIG1-215ENST00000597901 ZNF154Q13106 437 aa12.63□□□□□ -0.39
LIG1-215ENST00000597901 EIF2B1Q14232 305 aaKnown RBP12.63□□□□□ -0.39
LIG1-215ENST00000597901 FLOT2Q14254 428 aa12.63□□□□□ -0.39
LIG1-215ENST00000597901 OR8G1Q15617 311 aa12.63□□□□□ -0.39
LIG1-215ENST00000597901 MPPED2Q15777 294 aa12.63□□□□□ -0.39
LIG1-215ENST00000597901 ESCO2Q56NI9 601 aa12.63□□□□□ -0.39
LIG1-215ENST00000597901 USP43Q70EL4 1123 aa12.63□□□□□ -0.39
LIG1-215ENST00000597901 DPY19L4Q7Z388 723 aa12.63□□□□□ -0.39
LIG1-215ENST00000597901 HS3ST5Q8IZT8 346 aa12.63□□□□□ -0.39
LIG1-215ENST00000597901 C1orf87Q8N0U7 546 aa12.63□□□□□ -0.39
LIG1-215ENST00000597901 PAPD5Q8NDF8 572 aaKnown RBP12.63□□□□□ -0.39
LIG1-215ENST00000597901 Q8TCH9 128 aa12.63□□□□□ -0.39
LIG1-215ENST00000597901 SGK3Q96BR1 496 aa12.63□□□□□ -0.39
LIG1-215ENST00000597901 INTS14Q96SY0 518 aa12.63□□□□□ -0.39
LIG1-215ENST00000597901 ABHD6Q9BV23 337 aa12.63□□□□□ -0.39
LIG1-215ENST00000597901 OR51V1Q9H2C8 321 aa12.63□□□□□ -0.39
LIG1-215ENST00000597901 MIOXQ9UGB7 285 aa12.63□□□□□ -0.39
LIG1-215ENST00000597901 POMPQ9Y244 141 aa12.63□□□□□ -0.39
LIG1-215ENST00000597901 INSIG2Q9Y5U4 225 aa12.63□□□□□ -0.39
LIG1-215ENST00000597901 STAB1Q9NY15 2570 aa12.62□□□□□ -0.39
LIG1-215ENST00000597901 TCRBV3S1A0A5B6 114 aa12.62□□□□□ -0.39
LIG1-215ENST00000597901 A8MXK9 166 aa12.62□□□□□ -0.39
LIG1-215ENST00000597901 ZNF878C9JN71 531 aa12.62□□□□□ -0.39
LIG1-215ENST00000597901 E2F6O75461 281 aa12.62□□□□□ -0.39
LIG1-215ENST00000597901 DNAJC8O75937 253 aaPredicted RBP12.62□□□□□ -0.39
LIG1-215ENST00000597901 FSHBP01225 129 aa12.62□□□□□ -0.39
LIG1-215ENST00000597901 HMGN1P05114 100 aa12.62□□□□□ -0.39
LIG1-215ENST00000597901 OSMP13725 252 aa12.62□□□□□ -0.39
LIG1-215ENST00000597901 IRF2P14316 349 aa12.62□□□□□ -0.39
LIG1-215ENST00000597901 RAD23AP54725 363 aa12.62□□□□□ -0.39
LIG1-215ENST00000597901 GRB2P62993 217 aaKnown RBP12.62□□□□□ -0.39
LIG1-215ENST00000597901 CBX1P83916 185 aa12.62□□□□□ -0.39
LIG1-215ENST00000597901 CDK5Q00535 292 aa12.62□□□□□ -0.39
LIG1-215ENST00000597901 PRAMEF6Q5VXH4 476 aa12.62□□□□□ -0.39
LIG1-215ENST00000597901 KLBQ86Z14 1044 aa12.62□□□□□ -0.39
LIG1-215ENST00000597901 ERI1Q8IV48 349 aaKnown RBP12.62□□□□□ -0.39
LIG1-215ENST00000597901 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.62□□□□□ -0.39
LIG1-215ENST00000597901 SEMA6DQ8NFY4 1073 aa12.62□□□□□ -0.39
LIG1-215ENST00000597901 OR11L1Q8NGX0 322 aa12.62□□□□□ -0.39
LIG1-215ENST00000597901 ZFAND2BQ8WV99 257 aa12.62□□□□□ -0.39
LIG1-215ENST00000597901 TOR3AQ9H497 397 aa12.62□□□□□ -0.39
LIG1-215ENST00000597901 YY1AP1Q9H869 796 aa12.62□□□□□ -0.39
LIG1-215ENST00000597901 MARCH7Q9H992 704 aa12.62□□□□□ -0.39
LIG1-215ENST00000597901 ZNF556Q9HAH1 456 aa12.62□□□□□ -0.39
LIG1-215ENST00000597901 UFSP2Q9NUQ7 469 aa12.62□□□□□ -0.39
LIG1-215ENST00000597901 MRPL15Q9P015 296 aaKnown RBP12.62□□□□□ -0.39
LIG1-215ENST00000597901 DNAJB9Q9UBS3 223 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms