RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 MPPED2Q15777 294 aa18.84■□□□□ 0.61
SSBP4-203ENST00000593641 PDLIM3Q53GG5 364 aaPredicted RBP18.84■□□□□ 0.61
SSBP4-203ENST00000593641 FIP1L1Q6UN15 594 aaKnown RBP18.84■□□□□ 0.61
SSBP4-203ENST00000593641 ZBTB46Q86UZ6 589 aa18.84■□□□□ 0.61
SSBP4-203ENST00000593641 FAM86B1Q8N7N1 296 aa18.84■□□□□ 0.61
SSBP4-203ENST00000593641 SDR9C7Q8NEX9 313 aa18.84■□□□□ 0.61
SSBP4-203ENST00000593641 SPTSSAQ969W0 71 aa18.84■□□□□ 0.61
SSBP4-203ENST00000593641 ZNF799Q96GE5 643 aa18.84■□□□□ 0.61
SSBP4-203ENST00000593641 FUZQ9BT04 418 aa18.84■□□□□ 0.61
SSBP4-203ENST00000593641 ADAT1Q9BUB4 502 aaKnown RBP18.84■□□□□ 0.61
SSBP4-203ENST00000593641 MARCH7Q9H992 704 aa18.84■□□□□ 0.61
SSBP4-203ENST00000593641 V9GYQ6 96 aa18.84■□□□□ 0.61
SSBP4-203ENST00000593641 P2RY10O00398 339 aa18.83■□□□□ 0.6
SSBP4-203ENST00000593641 OR10H3O60404 316 aa18.83■□□□□ 0.6
SSBP4-203ENST00000593641 LIPFP07098 398 aa18.83■□□□□ 0.6
SSBP4-203ENST00000593641 ZNF823P16415 610 aa18.83■□□□□ 0.6
SSBP4-203ENST00000593641 CA6P23280 308 aa18.83■□□□□ 0.6
SSBP4-203ENST00000593641 GGT2P36268 569 aa18.83■□□□□ 0.6
SSBP4-203ENST00000593641 CFHR2P36980 270 aa18.83■□□□□ 0.6
SSBP4-203ENST00000593641 DBPQ10586 325 aaPredicted RBP18.83■□□□□ 0.6
SSBP4-203ENST00000593641 RUSC1-AS1Q66K80 236 aa18.83■□□□□ 0.6
SSBP4-203ENST00000593641 Q6YL49 198 aa18.83■□□□□ 0.6
SSBP4-203ENST00000593641 NAA40Q86UY6 237 aa18.83■□□□□ 0.6
SSBP4-203ENST00000593641 BOLLQ8N9W6 283 aaKnown RBP18.83■□□□□ 0.6
SSBP4-203ENST00000593641 WFDC12Q8WWY7 111 aa18.83■□□□□ 0.6
SSBP4-203ENST00000593641 FAM71F1Q96KD3 344 aaPredicted RBP18.83■□□□□ 0.6
SSBP4-203ENST00000593641 FN3KQ9H479 309 aa18.83■□□□□ 0.6
SSBP4-203ENST00000593641 PNRC2Q9NPJ4 139 aaKnown RBP18.83■□□□□ 0.6
SSBP4-203ENST00000593641 TRIM36Q9NQ86 728 aa18.83■□□□□ 0.6
SSBP4-203ENST00000593641 KCNG2Q9UJ96 466 aa18.83■□□□□ 0.6
SSBP4-203ENST00000593641 CD300LBA8K4G0 201 aa18.82■□□□□ 0.6
SSBP4-203ENST00000593641 ZNF879B4DU55 563 aa18.82■□□□□ 0.6
SSBP4-203ENST00000593641 LGALS8O00214 317 aa18.82■□□□□ 0.6
SSBP4-203ENST00000593641 IDH3BO43837 385 aa18.82■□□□□ 0.6
SSBP4-203ENST00000593641 IFNGR2P38484 337 aa18.82■□□□□ 0.6
SSBP4-203ENST00000593641 SFRP4Q6FHJ7 346 aaPredicted RBP18.82■□□□□ 0.6
SSBP4-203ENST00000593641 TMEM86BQ8N661 226 aa18.82■□□□□ 0.6
SSBP4-203ENST00000593641 KIR3DL3Q8N743 410 aa18.82■□□□□ 0.6
SSBP4-203ENST00000593641 GATAD2BQ8WXI9 593 aa18.82■□□□□ 0.6
SSBP4-203ENST00000593641 CMTM5Q96DZ9 223 aa18.82■□□□□ 0.6
SSBP4-203ENST00000593641 NSRP1Q9H0G5 558 aaKnown RBP18.82■□□□□ 0.6
SSBP4-203ENST00000593641 ADA2Q9NZK5 511 aa18.82■□□□□ 0.6
SSBP4-203ENST00000593641 NOTCH1P46531 2555 aa18.82■□□□□ 0.6
SSBP4-203ENST00000593641 TRAV38-1A0A0B4J264 116 aa18.81■□□□□ 0.6
SSBP4-203ENST00000593641 OR6C68A6NDL8 312 aa18.81■□□□□ 0.6
SSBP4-203ENST00000593641 GGT3PA6NGU5 568 aa18.81■□□□□ 0.6
SSBP4-203ENST00000593641 C3orf80F5H4A9 247 aa18.81■□□□□ 0.6
SSBP4-203ENST00000593641 ADAM20O43506 726 aa18.81■□□□□ 0.6
SSBP4-203ENST00000593641 GMDSO60547 372 aa18.81■□□□□ 0.6
SSBP4-203ENST00000593641 TOX4O94842 621 aa18.81■□□□□ 0.6
SSBP4-203ENST00000593641 SFTPBP07988 381 aa18.81■□□□□ 0.6
SSBP4-203ENST00000593641 OR8B8Q15620 311 aa18.81■□□□□ 0.6
SSBP4-203ENST00000593641 MIDNQ504T8 468 aa18.81■□□□□ 0.6
SSBP4-203ENST00000593641 METTL11BQ5VVY1 283 aa18.81■□□□□ 0.6
SSBP4-203ENST00000593641 PNLDC1Q8NA58 520 aaKnown RBP18.81■□□□□ 0.6
SSBP4-203ENST00000593641 PLPP7Q8NBV4 271 aa18.81■□□□□ 0.6
SSBP4-203ENST00000593641 CTSZQ9UBR2 303 aa18.81■□□□□ 0.6
SSBP4-203ENST00000593641 POMT1Q9Y6A1 747 aa18.81■□□□□ 0.6
SSBP4-203ENST00000593641 NDUFA2O43678 99 aa18.8■□□□□ 0.6
SSBP4-203ENST00000593641 HOXA4Q00056 320 aaPredicted RBP18.8■□□□□ 0.6
SSBP4-203ENST00000593641 SNAI3Q3KNW1 292 aa18.8■□□□□ 0.6
SSBP4-203ENST00000593641 OLFML2AQ68BL7 652 aa18.8■□□□□ 0.6
SSBP4-203ENST00000593641 BRICD5Q6PL45 260 aa18.8■□□□□ 0.6
SSBP4-203ENST00000593641 RNF148Q8N7C7 305 aa18.8■□□□□ 0.6
SSBP4-203ENST00000593641 OR2AE1Q8NHA4 323 aa18.8■□□□□ 0.6
SSBP4-203ENST00000593641 MCUR1Q96AQ8 359 aa18.8■□□□□ 0.6
SSBP4-203ENST00000593641 PYURFQ96I23 114 aa18.8■□□□□ 0.6
SSBP4-203ENST00000593641 MAP6Q96JE9 813 aa18.8■□□□□ 0.6
SSBP4-203ENST00000593641 CHIAQ9BZP6 476 aa18.8■□□□□ 0.6
SSBP4-203ENST00000593641 GORASP2Q9H8Y8 452 aa18.8■□□□□ 0.6
SSBP4-203ENST00000593641 MRPL22Q9NWU5 206 aaKnown RBP18.8■□□□□ 0.6
SSBP4-203ENST00000593641 MRPL15Q9P015 296 aaKnown RBP18.8■□□□□ 0.6
SSBP4-203ENST00000593641 OOEPA6NGQ2 149 aa18.79■□□□□ 0.6
SSBP4-203ENST00000593641 A6NLC8 198 aa18.79■□□□□ 0.6
SSBP4-203ENST00000593641 TNFRSF13BO14836 293 aaPredicted RBP18.79■□□□□ 0.6
SSBP4-203ENST00000593641 NDUFA7O95182 113 aa18.79■□□□□ 0.6
SSBP4-203ENST00000593641 MELTFP08582 738 aa18.79■□□□□ 0.6
SSBP4-203ENST00000593641 ZNF92Q03936 586 aa18.79■□□□□ 0.6
SSBP4-203ENST00000593641 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.79■□□□□ 0.6
SSBP4-203ENST00000593641 MZT1Q08AG7 82 aa18.79■□□□□ 0.6
SSBP4-203ENST00000593641 SLC35F1Q5T1Q4 408 aa18.79■□□□□ 0.6
SSBP4-203ENST00000593641 ZNF620Q6ZNG0 422 aa18.79■□□□□ 0.6
SSBP4-203ENST00000593641 PROKR2Q8NFJ6 384 aa18.79■□□□□ 0.6
SSBP4-203ENST00000593641 OR4C15Q8NGM1 316 aa18.79■□□□□ 0.6
SSBP4-203ENST00000593641 SSMEM1Q8WWF3 244 aa18.79■□□□□ 0.6
SSBP4-203ENST00000593641 WDFY2Q96P53 400 aa18.79■□□□□ 0.6
SSBP4-203ENST00000593641 TRIM15Q9C019 465 aa18.79■□□□□ 0.6
SSBP4-203ENST00000593641 ACOXLQ9NUZ1 547 aa18.79■□□□□ 0.6
SSBP4-203ENST00000593641 C1RLQ9NZP8 487 aa18.79■□□□□ 0.6
SSBP4-203ENST00000593641 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.78■□□□□ 0.6
SSBP4-203ENST00000593641 CENPVL3A0A0U1RRI6 287 aa18.78■□□□□ 0.6
SSBP4-203ENST00000593641 PTBP3O95758 552 aaKnown RBP18.78■□□□□ 0.6
SSBP4-203ENST00000593641 MMP9P14780 707 aa18.78■□□□□ 0.6
SSBP4-203ENST00000593641 RPS27P42677 84 aaKnown RBP18.78■□□□□ 0.6
SSBP4-203ENST00000593641 RPL15P61313 204 aaKnown RBP18.78■□□□□ 0.6
SSBP4-203ENST00000593641 SRSF4Q08170 494 aaKnown RBP18.78■□□□□ 0.6
SSBP4-203ENST00000593641 PDCD1Q15116 288 aa18.78■□□□□ 0.6
SSBP4-203ENST00000593641 DRAM2Q6UX65 266 aa18.78■□□□□ 0.6
SSBP4-203ENST00000593641 SPERTQ8NA61 448 aa18.78■□□□□ 0.6
SSBP4-203ENST00000593641 OR52L1Q8NGH7 329 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms