RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 EFNB1P98172 346 aa7.78□□□□□ -1.16
DNMT1-223ENST00000591239 MVKQ03426 396 aa7.78□□□□□ -1.16
DNMT1-223ENST00000591239 SLC3A1Q07837 685 aa7.78□□□□□ -1.16
DNMT1-223ENST00000591239 GLYATL3Q5SZD4 288 aa7.78□□□□□ -1.16
DNMT1-223ENST00000591239 AVPI1Q5T686 147 aa7.78□□□□□ -1.16
DNMT1-223ENST00000591239 SLX4IPQ5VYV7 408 aa7.78□□□□□ -1.16
DNMT1-223ENST00000591239 C12orf73Q69YU5 71 aa7.78□□□□□ -1.16
DNMT1-223ENST00000591239 MRPL21Q7Z2W9 205 aaKnown RBP7.78□□□□□ -1.16
DNMT1-223ENST00000591239 C10orf67Q8IYJ2 551 aa7.78□□□□□ -1.16
DNMT1-223ENST00000591239 ZNF283Q8N7M2 679 aa7.78□□□□□ -1.16
DNMT1-223ENST00000591239 OR10AD1Q8NGE0 317 aa7.78□□□□□ -1.16
DNMT1-223ENST00000591239 OR2AE1Q8NHA4 323 aa7.78□□□□□ -1.16
DNMT1-223ENST00000591239 THEM6Q8WUY1 208 aa7.78□□□□□ -1.16
DNMT1-223ENST00000591239 ITLN1Q8WWA0 313 aa7.78□□□□□ -1.16
DNMT1-223ENST00000591239 RAB1CQ92928 201 aa7.78□□□□□ -1.16
DNMT1-223ENST00000591239 TIMD4Q96H15 378 aa7.78□□□□□ -1.16
DNMT1-223ENST00000591239 C1orf159Q96HA4 380 aa7.78□□□□□ -1.16
DNMT1-223ENST00000591239 RAB3IPQ96QF0 476 aaPredicted RBP7.78□□□□□ -1.16
DNMT1-223ENST00000591239 OR2V2Q96R30 315 aa7.78□□□□□ -1.16
DNMT1-223ENST00000591239 AMELYQ99218 206 aa7.78□□□□□ -1.16
DNMT1-223ENST00000591239 OSBPL10Q9BXB5 764 aa7.78□□□□□ -1.16
DNMT1-223ENST00000591239 TOR3AQ9H497 397 aa7.78□□□□□ -1.16
DNMT1-223ENST00000591239 TMEM100Q9NV29 134 aa7.78□□□□□ -1.16
DNMT1-223ENST00000591239 WIPI2Q9Y4P8 454 aa7.78□□□□□ -1.16
DNMT1-223ENST00000591239 N6AMT1Q9Y5N5 214 aa7.78□□□□□ -1.16
DNMT1-223ENST00000591239 MALRD1Q5VYJ5 2156 aa7.78□□□□□ -1.16
DNMT1-223ENST00000591239 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.78□□□□□ -1.164e-7■■■□□ 16.9
DNMT1-223ENST00000591239 ABCA2Q9BZC7 2435 aa7.77□□□□□ -1.17
DNMT1-223ENST00000591239 CCDC182A6NF36 153 aa7.77□□□□□ -1.17
DNMT1-223ENST00000591239 CD300LBA8K4G0 201 aa7.77□□□□□ -1.17
DNMT1-223ENST00000591239 H0YL77 283 aa7.77□□□□□ -1.17
DNMT1-223ENST00000591239 MLNRO43193 412 aa7.77□□□□□ -1.17
DNMT1-223ENST00000591239 APOC1P02654 83 aa7.77□□□□□ -1.17
DNMT1-223ENST00000591239 HLA-DPB1P04440 258 aa7.77□□□□□ -1.17
DNMT1-223ENST00000591239 ANXA2P07355 339 aaKnown RBP7.77□□□□□ -1.17
DNMT1-223ENST00000591239 POLR2IP36954 125 aaKnown RBP7.77□□□□□ -1.17
DNMT1-223ENST00000591239 RBMXP38159 391 aaKnown RBP7.77□□□□□ -1.17
DNMT1-223ENST00000591239 CX3CR1P49238 355 aa7.77□□□□□ -1.17
DNMT1-223ENST00000591239 HCCSP53701 268 aa7.77□□□□□ -1.17
DNMT1-223ENST00000591239 CDH15P55291 814 aa7.77□□□□□ -1.17
DNMT1-223ENST00000591239 ZNF121P58317 390 aaPredicted RBP7.77□□□□□ -1.17
DNMT1-223ENST00000591239 LMO4P61968 165 aa7.77□□□□□ -1.17
DNMT1-223ENST00000591239 HNRNPA0Q13151 305 aaKnown RBP7.77□□□□□ -1.17
DNMT1-223ENST00000591239 MEPCEQ7L2J0 689 aaKnown RBP7.77□□□□□ -1.17
DNMT1-223ENST00000591239 SLC16A9Q7RTY1 509 aa7.77□□□□□ -1.17
DNMT1-223ENST00000591239 BCDIN3DQ7Z5W3 292 aaKnown RBP7.77□□□□□ -1.17
DNMT1-223ENST00000591239 PEG10Q86TG7 708 aaKnown RBP7.77□□□□□ -1.17
DNMT1-223ENST00000591239 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.77□□□□□ -1.17
DNMT1-223ENST00000591239 TCEANCQ8N8B7 351 aa7.77□□□□□ -1.17
DNMT1-223ENST00000591239 LINC01356Q8N9X3 169 aa7.77□□□□□ -1.17
DNMT1-223ENST00000591239 TMEM163Q8TC26 289 aa7.77□□□□□ -1.17
DNMT1-223ENST00000591239 SPRYD4Q8WW59 207 aaPredicted RBP7.77□□□□□ -1.17
DNMT1-223ENST00000591239 MEGF10Q96KG7 1140 aa7.77□□□□□ -1.17
DNMT1-223ENST00000591239 IL4I1Q96RQ9 567 aa7.77□□□□□ -1.17
DNMT1-223ENST00000591239 RBM4BQ9BQ04 359 aaKnown RBP7.77□□□□□ -1.17
DNMT1-223ENST00000591239 GABARAPL3Q9BY60 117 aa7.77□□□□□ -1.17
DNMT1-223ENST00000591239 YIPF3Q9GZM5 350 aa7.77□□□□□ -1.17
DNMT1-223ENST00000591239 OPA3Q9H6K4 179 aa7.77□□□□□ -1.17
DNMT1-223ENST00000591239 SP140LQ9H930 580 aa7.77□□□□□ -1.17
DNMT1-223ENST00000591239 GCM1Q9NP62 436 aa7.77□□□□□ -1.17
DNMT1-223ENST00000591239 TMEM106BQ9NUM4 274 aa7.77□□□□□ -1.17
DNMT1-223ENST00000591239 TMEM160Q9NX00 188 aa7.77□□□□□ -1.17
DNMT1-223ENST00000591239 DCAF16Q9NXF7 216 aa7.77□□□□□ -1.17
DNMT1-223ENST00000591239 DNAJC27Q9NZQ0 273 aa7.77□□□□□ -1.17
DNMT1-223ENST00000591239 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.77□□□□□ -1.17
DNMT1-223ENST00000591239 H2AFY2Q9P0M6 372 aaPredicted RBP7.77□□□□□ -1.17
DNMT1-223ENST00000591239 LAMP5Q9UJQ1 280 aa7.77□□□□□ -1.17
DNMT1-223ENST00000591239 CDC42EP3Q9UKI2 254 aa7.77□□□□□ -1.17
DNMT1-223ENST00000591239 KCNS2Q9ULS6 477 aa7.77□□□□□ -1.17
DNMT1-223ENST00000591239 PPP1R3CQ9UQK1 317 aa7.77□□□□□ -1.17
DNMT1-223ENST00000591239 KLHDC2Q9Y2U9 406 aa7.77□□□□□ -1.17
DNMT1-223ENST00000591239 FBN1P35555 2871 aaKnown RBP7.76□□□□□ -1.17
DNMT1-223ENST00000591239 DYSFO75923 2080 aa7.76□□□□□ -1.17
DNMT1-223ENST00000591239 GGT3PA6NGU5 568 aa7.76□□□□□ -1.17
DNMT1-223ENST00000591239 B4DSR2 109 aa7.76□□□□□ -1.17
DNMT1-223ENST00000591239 F5H5P2 479 aa7.76□□□□□ -1.17
DNMT1-223ENST00000591239 TBX1O43435 398 aa7.76□□□□□ -1.17
DNMT1-223ENST00000591239 XRCC2O43543 280 aa7.76□□□□□ -1.17
DNMT1-223ENST00000591239 ALPLP05186 524 aa7.76□□□□□ -1.17
DNMT1-223ENST00000591239 MRPL3P09001 348 aaKnown RBP7.76□□□□□ -1.17
DNMT1-223ENST00000591239 ALOX5APP20292 161 aa7.76□□□□□ -1.17
DNMT1-223ENST00000591239 CA6P23280 308 aa7.76□□□□□ -1.17
DNMT1-223ENST00000591239 SRP9P49458 86 aaKnown RBP7.76□□□□□ -1.17
DNMT1-223ENST00000591239 KRTAP21-3Q3LHN1 58 aa7.76□□□□□ -1.17
DNMT1-223ENST00000591239 CHRFAM7AQ494W8 412 aa7.76□□□□□ -1.17
DNMT1-223ENST00000591239 LCN1P1Q5VSP4 162 aa7.76□□□□□ -1.17
DNMT1-223ENST00000591239 AADACL4Q5VUY2 407 aa7.76□□□□□ -1.17
DNMT1-223ENST00000591239 NXNL2Q5VZ03 156 aa7.76□□□□□ -1.17
DNMT1-223ENST00000591239 LRRN1Q6UXK5 716 aa7.76□□□□□ -1.17
DNMT1-223ENST00000591239 FAM57BQ71RH2 274 aa7.76□□□□□ -1.17
DNMT1-223ENST00000591239 PRSS45Q7RTY3 260 aa7.76□□□□□ -1.17
DNMT1-223ENST00000591239 OR52H1Q8NGJ2 320 aa7.76□□□□□ -1.17
DNMT1-223ENST00000591239 SPSB4Q96A44 273 aa7.76□□□□□ -1.17
DNMT1-223ENST00000591239 SLC22A4Q9H015 551 aa7.76□□□□□ -1.17
DNMT1-223ENST00000591239 RIBC2Q9H4K1 309 aa7.76□□□□□ -1.17
DNMT1-223ENST00000591239 ZNF665Q9H7R5 613 aa7.76□□□□□ -1.17
DNMT1-223ENST00000591239 BRD7Q9NPI1 651 aa7.76□□□□□ -1.17
DNMT1-223ENST00000591239 NPTNQ9Y639 398 aa7.76□□□□□ -1.17
DNMT1-223ENST00000591239 TANC2Q9HCD6 1990 aa7.75□□□□□ -1.17
DNMT1-223ENST00000591239 IGHV3-64DA0A0J9YX35 117 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms