RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 DEFB136Q30KP8 78 aa11.17□□□□□ -0.62
CSNK1D-213ENST00000580446 C11orf91Q3C1V1 193 aa11.17□□□□□ -0.62
CSNK1D-213ENST00000580446 CCDC92Q53HC0 331 aaPredicted RBP11.17□□□□□ -0.62
CSNK1D-213ENST00000580446 FOXL2NBQ6ZUU3 175 aa11.17□□□□□ -0.62
CSNK1D-213ENST00000580446 OR2W3Q7Z3T1 314 aa11.17□□□□□ -0.62
CSNK1D-213ENST00000580446 FAM185AQ8N0U4 392 aa11.17□□□□□ -0.62
CSNK1D-213ENST00000580446 C4orf33Q8N1A6 199 aa11.17□□□□□ -0.62
CSNK1D-213ENST00000580446 LNX2Q8N448 690 aa11.17□□□□□ -0.62
CSNK1D-213ENST00000580446 PCYOX1LQ8NBM8 494 aa11.17□□□□□ -0.62
CSNK1D-213ENST00000580446 KLHL30-AS1Q8NEE0 82 aa11.17□□□□□ -0.62
CSNK1D-213ENST00000580446 OR52H1Q8NGJ2 320 aa11.17□□□□□ -0.62
CSNK1D-213ENST00000580446 OR5L1Q8NGL2 311 aa11.17□□□□□ -0.62
CSNK1D-213ENST00000580446 BBS10Q8TAM1 723 aa11.17□□□□□ -0.62
CSNK1D-213ENST00000580446 RPS4Y2Q8TD47 263 aa11.17□□□□□ -0.62
CSNK1D-213ENST00000580446 LRRC29Q8WV35 223 aa11.17□□□□□ -0.62
CSNK1D-213ENST00000580446 ACOT11Q8WXI4 607 aaPredicted RBP11.17□□□□□ -0.62
CSNK1D-213ENST00000580446 SLCO4A1Q96BD0 722 aa11.17□□□□□ -0.62
CSNK1D-213ENST00000580446 HCAR1Q9BXC0 346 aa11.17□□□□□ -0.62
CSNK1D-213ENST00000580446 TPT1P8Q9HAU6 139 aa11.17□□□□□ -0.62
CSNK1D-213ENST00000580446 TMEM247A6NEH6 219 aa11.16□□□□□ -0.62
CSNK1D-213ENST00000580446 VGLL3A8MV65 326 aa11.16□□□□□ -0.62
CSNK1D-213ENST00000580446 CENPBD1B2RD01 187 aa11.16□□□□□ -0.62
CSNK1D-213ENST00000580446 SEC14L6B5MCN3 397 aa11.16□□□□□ -0.62
CSNK1D-213ENST00000580446 C5orf58C9J3I9 102 aa11.16□□□□□ -0.62
CSNK1D-213ENST00000580446 PRR23D1E9PI22 279 aaPredicted RBP11.16□□□□□ -0.62
CSNK1D-213ENST00000580446 RFXANKO14593 260 aa11.16□□□□□ -0.62
CSNK1D-213ENST00000580446 RER1O15258 196 aa11.16□□□□□ -0.62
CSNK1D-213ENST00000580446 PRR23D2P0DMB1 279 aaPredicted RBP11.16□□□□□ -0.62
CSNK1D-213ENST00000580446 PAICSP22234 425 aaKnown RBP11.16□□□□□ -0.62
CSNK1D-213ENST00000580446 AQP1P29972 269 aa11.16□□□□□ -0.62
CSNK1D-213ENST00000580446 MYCNOSP40205 109 aa11.16□□□□□ -0.62
CSNK1D-213ENST00000580446 GUCA1AP43080 201 aaPredicted RBP11.16□□□□□ -0.62
CSNK1D-213ENST00000580446 VEGFCP49767 419 aa11.16□□□□□ -0.62
CSNK1D-213ENST00000580446 LGALS4P56470 323 aa11.16□□□□□ -0.62
CSNK1D-213ENST00000580446 BLMHQ13867 455 aa11.16□□□□□ -0.62
CSNK1D-213ENST00000580446 LAPTM4AQ15012 233 aa11.16□□□□□ -0.62
CSNK1D-213ENST00000580446 SSX2Q16385 188 aa11.16□□□□□ -0.62
CSNK1D-213ENST00000580446 DGUOKQ16854 277 aa11.16□□□□□ -0.62
CSNK1D-213ENST00000580446 LRRC10Q5BKY1 277 aa11.16□□□□□ -0.62
CSNK1D-213ENST00000580446 TTC33Q6PID6 262 aaPredicted RBP11.16□□□□□ -0.62
CSNK1D-213ENST00000580446 DHRS4L2Q6PKH6 230 aa11.16□□□□□ -0.62
CSNK1D-213ENST00000580446 C16orf89Q6UX73 402 aa11.16□□□□□ -0.62
CSNK1D-213ENST00000580446 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.16□□□□□ -0.62
CSNK1D-213ENST00000580446 PFN4Q8NHR9 129 aa11.16□□□□□ -0.62
CSNK1D-213ENST00000580446 SPRYD4Q8WW59 207 aaPredicted RBP11.16□□□□□ -0.62
CSNK1D-213ENST00000580446 IFT81Q8WYA0 676 aa11.16□□□□□ -0.62
CSNK1D-213ENST00000580446 APOBEC3DQ96AK3 386 aaPredicted RBP11.16□□□□□ -0.62
CSNK1D-213ENST00000580446 RAX2Q96IS3 184 aa11.16□□□□□ -0.62
CSNK1D-213ENST00000580446 MCHR1Q99705 422 aa11.16□□□□□ -0.62
CSNK1D-213ENST00000580446 BCL2L10Q9HD36 194 aa11.16□□□□□ -0.62
CSNK1D-213ENST00000580446 MEPEQ9NQ76 525 aaPredicted RBP11.16□□□□□ -0.62
CSNK1D-213ENST00000580446 PSMC3IPQ9P2W1 217 aaPredicted RBP11.16□□□□□ -0.62
CSNK1D-213ENST00000580446 ZNF391Q9UJN7 358 aa11.16□□□□□ -0.62
CSNK1D-213ENST00000580446 SLC7A7Q9UM01 511 aa11.16□□□□□ -0.62
CSNK1D-213ENST00000580446 COPEO14579 308 aa11.15□□□□□ -0.62
CSNK1D-213ENST00000580446 CHP2O43745 196 aa11.15□□□□□ -0.62
CSNK1D-213ENST00000580446 SLC25A17O43808 307 aa11.15□□□□□ -0.62
CSNK1D-213ENST00000580446 ANOS1P23352 680 aa11.15□□□□□ -0.62
CSNK1D-213ENST00000580446 CLNS1AP54105 237 aaKnown RBP11.15□□□□□ -0.62
CSNK1D-213ENST00000580446 CSNK2BP67870 215 aa11.15□□□□□ -0.62
CSNK1D-213ENST00000580446 MICBQ29980 383 aa11.15□□□□□ -0.62
CSNK1D-213ENST00000580446 ABCA11PQ4W5N1 156 aa11.15□□□□□ -0.62
CSNK1D-213ENST00000580446 C9orf66Q5T8R8 295 aa11.15□□□□□ -0.62
CSNK1D-213ENST00000580446 ZNF782Q6ZMW2 699 aaPredicted RBP11.15□□□□□ -0.62
CSNK1D-213ENST00000580446 SLC36A1Q7Z2H8 476 aa11.15□□□□□ -0.62
CSNK1D-213ENST00000580446 RBM45Q8IUH3 476 aaKnown RBP11.15□□□□□ -0.62
CSNK1D-213ENST00000580446 OR9Q1Q8NGQ5 310 aa11.15□□□□□ -0.62
CSNK1D-213ENST00000580446 TM2D3Q9BRN9 247 aa11.15□□□□□ -0.62
CSNK1D-213ENST00000580446 HCKP08631 526 aa11.14□□□□□ -0.63
CSNK1D-213ENST00000580446 ALDOCP09972 364 aaKnown RBP11.14□□□□□ -0.63
CSNK1D-213ENST00000580446 CD24P25063 80 aa11.14□□□□□ -0.63
CSNK1D-213ENST00000580446 TGM4P49221 684 aa11.14□□□□□ -0.63
CSNK1D-213ENST00000580446 HDDC2Q7Z4H3 204 aa11.14□□□□□ -0.63
CSNK1D-213ENST00000580446 SYT9Q86SS6 491 aa11.14□□□□□ -0.63
CSNK1D-213ENST00000580446 NAA40Q86UY6 237 aa11.14□□□□□ -0.63
CSNK1D-213ENST00000580446 SMYD1Q8NB12 490 aa11.14□□□□□ -0.63
CSNK1D-213ENST00000580446 OR5D13Q8NGL4 314 aa11.14□□□□□ -0.63
CSNK1D-213ENST00000580446 RBP7Q96R05 134 aa11.14□□□□□ -0.63
CSNK1D-213ENST00000580446 FMO2Q99518 471 aa11.14□□□□□ -0.63
CSNK1D-213ENST00000580446 SLC25A10Q9UBX3 287 aaPredicted RBP11.14□□□□□ -0.63
CSNK1D-213ENST00000580446 SMIM23A6NLE4 172 aa11.13□□□□□ -0.63
CSNK1D-213ENST00000580446 TRIM64CA6NLI5 447 aa11.13□□□□□ -0.63
CSNK1D-213ENST00000580446 ZSCAN12O43309 604 aa11.13□□□□□ -0.63
CSNK1D-213ENST00000580446 ANP32DO95626 131 aa11.13□□□□□ -0.63
CSNK1D-213ENST00000580446 PTBP3O95758 552 aaKnown RBP11.13□□□□□ -0.63
CSNK1D-213ENST00000580446 CCT5P48643 541 aa11.13□□□□□ -0.63
CSNK1D-213ENST00000580446 DPY19L1Q2PZI1 675 aa11.13□□□□□ -0.63
CSNK1D-213ENST00000580446 ZNF260Q3ZCT1 412 aa11.13□□□□□ -0.63
CSNK1D-213ENST00000580446 C9orf152Q5JTZ5 239 aa11.13□□□□□ -0.63
CSNK1D-213ENST00000580446 ENTPD8Q5MY95 495 aa11.13□□□□□ -0.63
CSNK1D-213ENST00000580446 SWT1Q5T5J6 900 aaKnown RBP11.13□□□□□ -0.63
CSNK1D-213ENST00000580446 WDR86Q86TI4 376 aa11.13□□□□□ -0.63
CSNK1D-213ENST00000580446 SATL1Q86VE3 508 aa11.13□□□□□ -0.63
CSNK1D-213ENST00000580446 GAFA1Q96PS6 74 aa11.13□□□□□ -0.63
CSNK1D-213ENST00000580446 WDR13Q9H1Z4 485 aa11.13□□□□□ -0.63
CSNK1D-213ENST00000580446 RAD21L1Q9H4I0 556 aa11.13□□□□□ -0.63
CSNK1D-213ENST00000580446 RERGLQ9H628 205 aa11.13□□□□□ -0.63
CSNK1D-213ENST00000580446 C19orf12Q9NSK7 152 aa11.13□□□□□ -0.63
CSNK1D-213ENST00000580446 PITPNC1Q9UKF7 332 aa11.13□□□□□ -0.63
CSNK1D-213ENST00000580446 SLC13A4Q9UKG4 626 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms