RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 CGB2Q6NT52 195 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 FAM71F2Q6NXP2 309 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 KCNIP4Q6PIL6 250 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 HSDL2Q6YN16 418 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 CCDC80Q76M96 950 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 SSX8Q7RTT4 187 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 SLC26A11Q86WA9 606 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 NRMQ8IXM6 262 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 PRSS58Q8IYP2 241 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 CYP4Z2PQ8N1L4 340 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 LRRC25Q8N386 305 aaPredicted RBP2.77□□□□□ -1.97
HERC1-215ENST00000561436 LIX1Q8N485 282 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 ANKFN1Q8N957 763 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 MFSD9Q8NBP5 474 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 APCDD1LQ8NCL9 501 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 MORN4Q8NDC4 146 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 WFDC11Q8NEX6 87 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 B3GNT7Q8NFL0 401 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 OR2M7Q8NG81 312 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 NUBPLQ8TB37 319 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 ZPLD1Q8TCW7 415 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 MAIP1Q8WWC4 291 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 OSTF1Q92882 214 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 MS4A14Q96JA4 679 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 NPAS2Q99743 824 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 SFXN3Q9BWM7 321 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 CAPS2Q9BXY5 557 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 TTTY12Q9BZ98 90 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 ROGDIQ9GZN7 287 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 IL22Q9GZX6 179 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 FAM96AQ9H5X1 160 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 FANCFQ9NPI8 374 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 ZNF226Q9NYT6 803 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 OR1A1Q9P1Q5 309 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 PCYOX1Q9UHG3 505 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 BOKQ9UMX3 212 aaPredicted RBP2.77□□□□□ -1.97
HERC1-215ENST00000561436 FAM215AQ9Y5M1 114 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 BOD1L1Q8NFC6 3051 aa2.77□□□□□ -1.97
HERC1-215ENST00000561436 CSMD1Q96PZ7 3565 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 SHROOM3Q8TF72 1996 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 IGHV2-70DA0A0C4DH43 119 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 FRG2CA6NGY1 282 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 BTNL10A8MVZ5 291 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 MIF4GDA9UHW6 222 aaKnown RBP2.76□□□□□ -1.97
HERC1-215ENST00000561436 G3V4G9 280 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 OR7A17O14581 309 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 OR1I1O60431 355 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 CDC40O60508 579 aaKnown RBP eCLIP2.76□□□□□ -1.97
HERC1-215ENST00000561436 CTNSO60931 367 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 GPX5O75715 221 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 ACTL6AO96019 429 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 C8GP07360 202 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 SERPINA6P08185 405 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 SMIM10L1P0DMW3 83 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 CPN1P15169 458 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 ZNF44P15621 663 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 OGNP20774 298 aaKnown RBP2.76□□□□□ -1.97
HERC1-215ENST00000561436 CD80P33681 288 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 HNMTP50135 292 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 CCR8P51685 355 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 ARFIP1P53367 373 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 AP1S2P56377 157 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 RWDD2BP57060 319 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 EIF3EP60228 445 aaKnown RBP2.76□□□□□ -1.97
HERC1-215ENST00000561436 STXBP1P61764 594 aaKnown RBP2.76□□□□□ -1.97
HERC1-215ENST00000561436 DYNLT1P63172 113 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 TGM3Q08188 693 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 DMTNQ08495 405 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 POU6F1Q14863 301 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 EXOC3L2Q2M3D2 409 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 PIGGQ5H8A4 983 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 C16orf47Q6ZP98 133 aaPredicted RBP2.76□□□□□ -1.97
HERC1-215ENST00000561436 NCCRP1Q6ZVX7 275 aaPredicted RBP2.76□□□□□ -1.97
HERC1-215ENST00000561436 FRA10AC1Q70Z53 315 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 VN1R4Q7Z5H5 301 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 CLEC4FQ8N1N0 589 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 GPR137CQ8N3F9 429 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 TMEM251Q8N6I4 163 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 STEAP2Q8NFT2 490 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 NEIL3Q8TAT5 605 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 ACTL9Q8TC94 416 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 SLC22A8Q8TCC7 542 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 MRAPQ8TCY5 172 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 PAQR8Q8TEZ7 354 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 SKA2Q8WVK7 121 aaPredicted RBP2.76□□□□□ -1.97
HERC1-215ENST00000561436 SMIM10Q96HG1 83 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 BIRC8Q96P09 236 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 CCT7Q99832 543 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 CITED1Q99966 193 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 MAPKAP1Q9BPZ7 522 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 PELOQ9BRX2 385 aaKnown RBP2.76□□□□□ -1.97
HERC1-215ENST00000561436 SLC39A3Q9BRY0 314 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 KIFC1Q9BW19 673 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 TSGA10Q9BZW7 698 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 MEAF6Q9HAF1 191 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 SH2D2AQ9NP31 389 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 ADAP2Q9NPF8 381 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 TREX1Q9NSU2 369 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 PAK1IP1Q9NWT1 392 aaPredicted RBP2.76□□□□□ -1.97
HERC1-215ENST00000561436 BFARQ9NZS9 450 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms