RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 SLC16A9Q7RTY1 509 aa13.46□□□□□ -0.25
TUBB3-214ENST00000557490 SPRYD4Q8WW59 207 aaPredicted RBP13.46□□□□□ -0.25
TUBB3-214ENST00000557490 CCL17Q92583 94 aa13.46□□□□□ -0.25
TUBB3-214ENST00000557490 TIMD4Q96H15 378 aa13.46□□□□□ -0.25
TUBB3-214ENST00000557490 YIPF3Q9GZM5 350 aa13.46□□□□□ -0.25
TUBB3-214ENST00000557490 TMEM100Q9NV29 134 aa13.46□□□□□ -0.25
TUBB3-214ENST00000557490 LAMP5Q9UJQ1 280 aa13.46□□□□□ -0.25
TUBB3-214ENST00000557490 CR1P17927 2039 aa13.46□□□□□ -0.26
TUBB3-214ENST00000557490 CCDC182A6NF36 153 aa13.45□□□□□ -0.26
TUBB3-214ENST00000557490 GGT3PA6NGU5 568 aa13.45□□□□□ -0.26
TUBB3-214ENST00000557490 A8MV72 311 aaPredicted RBP13.45□□□□□ -0.26
TUBB3-214ENST00000557490 M0R129 80 aa13.45□□□□□ -0.26
TUBB3-214ENST00000557490 TBX1O43435 398 aa13.45□□□□□ -0.26
TUBB3-214ENST00000557490 OPRL1P41146 370 aa13.45□□□□□ -0.26
TUBB3-214ENST00000557490 GLYATL3Q5SZD4 288 aa13.45□□□□□ -0.26
TUBB3-214ENST00000557490 C6orf52Q5T4I8 152 aa13.45□□□□□ -0.26
TUBB3-214ENST00000557490 NXNL2Q5VZ03 156 aa13.45□□□□□ -0.26
TUBB3-214ENST00000557490 MEPCEQ7L2J0 689 aaKnown RBP13.45□□□□□ -0.26
TUBB3-214ENST00000557490 GID4Q8IVV7 300 aa13.45□□□□□ -0.26
TUBB3-214ENST00000557490 BHLHE23Q8NDY6 225 aa13.45□□□□□ -0.26
TUBB3-214ENST00000557490 RAB1CQ92928 201 aa13.45□□□□□ -0.26
TUBB3-214ENST00000557490 IL4I1Q96RQ9 567 aa13.45□□□□□ -0.26
TUBB3-214ENST00000557490 AMELYQ99218 206 aa13.45□□□□□ -0.26
TUBB3-214ENST00000557490 SLC30A2Q9BRI3 323 aa13.45□□□□□ -0.26
TUBB3-214ENST00000557490 OPA3Q9H6K4 179 aa13.45□□□□□ -0.26
TUBB3-214ENST00000557490 NARFLQ9H6Q4 476 aa13.45□□□□□ -0.26
TUBB3-214ENST00000557490 USE1Q9NZ43 259 aa13.45□□□□□ -0.26
TUBB3-214ENST00000557490 TREM2Q9NZC2 230 aa13.45□□□□□ -0.26
TUBB3-214ENST00000557490 IL19Q9UHD0 177 aa13.45□□□□□ -0.26
TUBB3-214ENST00000557490 CACNG2Q9Y698 323 aa13.45□□□□□ -0.26
TUBB3-214ENST00000557490 LOC100289279A0A1B0GTE1 492 aa13.44□□□□□ -0.26
TUBB3-214ENST00000557490 SLC22A31A6NKX4 558 aa13.44□□□□□ -0.26
TUBB3-214ENST00000557490 EI24O14681 340 aa13.44□□□□□ -0.26
TUBB3-214ENST00000557490 XRCC2O43543 280 aa13.44□□□□□ -0.26
TUBB3-214ENST00000557490 ALPLP05186 524 aa13.44□□□□□ -0.26
TUBB3-214ENST00000557490 MRPL3P09001 348 aaKnown RBP13.44□□□□□ -0.26
TUBB3-214ENST00000557490 ZNF16P17020 682 aaPredicted RBP13.44□□□□□ -0.26
TUBB3-214ENST00000557490 POLR2IP36954 125 aaKnown RBP13.44□□□□□ -0.26
TUBB3-214ENST00000557490 SRP9P49458 86 aaKnown RBP13.44□□□□□ -0.26
TUBB3-214ENST00000557490 RAD23AP54725 363 aa13.44□□□□□ -0.26
TUBB3-214ENST00000557490 PRSS12P56730 875 aa13.44□□□□□ -0.26
TUBB3-214ENST00000557490 ZNF121P58317 390 aaPredicted RBP13.44□□□□□ -0.26
TUBB3-214ENST00000557490 EFNB1P98172 346 aa13.44□□□□□ -0.26
TUBB3-214ENST00000557490 MVKQ03426 396 aa13.44□□□□□ -0.26
TUBB3-214ENST00000557490 ZNF92Q03936 586 aa13.44□□□□□ -0.26
TUBB3-214ENST00000557490 AVPI1Q5T686 147 aa13.44□□□□□ -0.26
TUBB3-214ENST00000557490 AADACL4Q5VUY2 407 aa13.44□□□□□ -0.26
TUBB3-214ENST00000557490 BCDIN3DQ7Z5W3 292 aaKnown RBP13.44□□□□□ -0.26
TUBB3-214ENST00000557490 PEG10Q86TG7 708 aaKnown RBP13.44□□□□□ -0.26
TUBB3-214ENST00000557490 OR2AE1Q8NHA4 323 aa13.44□□□□□ -0.26
TUBB3-214ENST00000557490 ITLN1Q8WWA0 313 aa13.44□□□□□ -0.26
TUBB3-214ENST00000557490 STMN2Q93045 179 aa13.44□□□□□ -0.26
TUBB3-214ENST00000557490 OR2V2Q96R30 315 aa13.44□□□□□ -0.26
TUBB3-214ENST00000557490 CNN2Q99439 309 aaKnown RBP13.44□□□□□ -0.26
TUBB3-214ENST00000557490 DNAJC27Q9NZQ0 273 aa13.44□□□□□ -0.26
TUBB3-214ENST00000557490 KLHDC2Q9Y2U9 406 aa13.44□□□□□ -0.26
TUBB3-214ENST00000557490 NOP16Q9Y3C1 178 aaKnown RBP13.44□□□□□ -0.26
TUBB3-214ENST00000557490 TMEM14AQ9Y6G1 99 aa13.44□□□□□ -0.26
TUBB3-214ENST00000557490 ABCA1O95477 2261 aa13.43□□□□□ -0.26
TUBB3-214ENST00000557490 CD300LBA8K4G0 201 aa13.43□□□□□ -0.26
TUBB3-214ENST00000557490 HAX1O00165 279 aa13.43□□□□□ -0.26
TUBB3-214ENST00000557490 BAG2O95816 211 aa13.43□□□□□ -0.26
TUBB3-214ENST00000557490 ALOX5APP20292 161 aa13.43□□□□□ -0.26
TUBB3-214ENST00000557490 ALDH3A2P51648 485 aa13.43□□□□□ -0.26
TUBB3-214ENST00000557490 CDC42P60953 191 aa13.43□□□□□ -0.26
TUBB3-214ENST00000557490 TIGD6Q17RP2 521 aa13.43□□□□□ -0.26
TUBB3-214ENST00000557490 SPRNQ5BIV9 151 aa13.43□□□□□ -0.26
TUBB3-214ENST00000557490 FAM166AQ6J272 317 aa13.43□□□□□ -0.26
TUBB3-214ENST00000557490 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.43□□□□□ -0.262e-8■■□□□ 12
TUBB3-214ENST00000557490 KCTD18Q6PI47 426 aaPredicted RBP13.43□□□□□ -0.26
TUBB3-214ENST00000557490 FAM57BQ71RH2 274 aa13.43□□□□□ -0.26
TUBB3-214ENST00000557490 KRT77Q7Z794 578 aa13.43□□□□□ -0.26
TUBB3-214ENST00000557490 PQLC1Q8N2U9 271 aa13.43□□□□□ -0.26
TUBB3-214ENST00000557490 CBR4Q8N4T8 237 aa13.43□□□□□ -0.26
TUBB3-214ENST00000557490 OR10AD1Q8NGE0 317 aa13.43□□□□□ -0.26
TUBB3-214ENST00000557490 OR52H1Q8NGJ2 320 aa13.43□□□□□ -0.26
TUBB3-214ENST00000557490 CLDND2Q8NHS1 167 aa13.43□□□□□ -0.26
TUBB3-214ENST00000557490 MSI2Q96DH6 328 aaKnown RBP13.43□□□□□ -0.26
TUBB3-214ENST00000557490 PGAM5Q96HS1 289 aa13.43□□□□□ -0.26
TUBB3-214ENST00000557490 C9orf16Q9BUW7 83 aa13.43□□□□□ -0.26
TUBB3-214ENST00000557490 SLC22A4Q9H015 551 aa13.43□□□□□ -0.26
TUBB3-214ENST00000557490 OR10A2Q9H208 303 aa13.43□□□□□ -0.26
TUBB3-214ENST00000557490 NIPAL2Q9H841 368 aa13.43□□□□□ -0.26
TUBB3-214ENST00000557490 BRD7Q9NPI1 651 aa13.43□□□□□ -0.26
TUBB3-214ENST00000557490 C5orf63A6NC05 138 aa13.42□□□□□ -0.26
TUBB3-214ENST00000557490 TGFAP01135 160 aa13.42□□□□□ -0.26
TUBB3-214ENST00000557490 CFL1P23528 166 aaKnown RBP13.42□□□□□ -0.26
TUBB3-214ENST00000557490 IL2RGP31785 369 aa13.42□□□□□ -0.26
TUBB3-214ENST00000557490 HCCSP53701 268 aa13.42□□□□□ -0.26
TUBB3-214ENST00000557490 LRRN1Q6UXK5 716 aa13.42□□□□□ -0.26
TUBB3-214ENST00000557490 LINC01356Q8N9X3 169 aa13.42□□□□□ -0.26
TUBB3-214ENST00000557490 OR8J1Q8NGP2 316 aa13.42□□□□□ -0.26
TUBB3-214ENST00000557490 ASB17Q8WXJ9 295 aa13.42□□□□□ -0.26
TUBB3-214ENST00000557490 MEGF10Q96KG7 1140 aa13.42□□□□□ -0.26
TUBB3-214ENST00000557490 TMEM106BQ9NUM4 274 aa13.42□□□□□ -0.26
TUBB3-214ENST00000557490 IMPAD1Q9NX62 359 aa13.42□□□□□ -0.26
TUBB3-214ENST00000557490 KCNS2Q9ULS6 477 aa13.42□□□□□ -0.26
TUBB3-214ENST00000557490 PPP1R3CQ9UQK1 317 aa13.42□□□□□ -0.26
TUBB3-214ENST00000557490 WIPI2Q9Y4P8 454 aa13.42□□□□□ -0.26
TUBB3-214ENST00000557490 F5H5P2 479 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms