RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 ZNF525Q8N782 197 aa14.92□□□□□ -0.02
SHMT2-225ENST00000556798 BHLHE23Q8NDY6 225 aa14.92□□□□□ -0.02
SHMT2-225ENST00000556798 TFAP2CQ92754 450 aa14.92□□□□□ -0.02
SHMT2-225ENST00000556798 PGAM5Q96HS1 289 aa14.92□□□□□ -0.02
SHMT2-225ENST00000556798 Q96MF0 132 aa14.92□□□□□ -0.02
SHMT2-225ENST00000556798 VCX3BQ9H321 246 aa14.92□□□□□ -0.02
SHMT2-225ENST00000556798 BARX1Q9HBU1 254 aaPredicted RBP14.92□□□□□ -0.02
SHMT2-225ENST00000556798 MRM2Q9UI43 246 aaKnown RBP14.92□□□□□ -0.02
SHMT2-225ENST00000556798 FLNAP21333 2647 aaKnown RBP14.91□□□□□ -0.02
SHMT2-225ENST00000556798 C17orf100A8MU93 164 aa14.91□□□□□ -0.02
SHMT2-225ENST00000556798 J3QRE1 110 aa14.91□□□□□ -0.02
SHMT2-225ENST00000556798 SPRY3O43610 288 aa14.91□□□□□ -0.02
SHMT2-225ENST00000556798 LILRA1O75019 489 aa14.91□□□□□ -0.02
SHMT2-225ENST00000556798 NCR1O76036 304 aa14.91□□□□□ -0.02
SHMT2-225ENST00000556798 F12P00748 615 aaPredicted RBP14.91□□□□□ -0.02
SHMT2-225ENST00000556798 MT-ND5P03915 603 aa14.91□□□□□ -0.02
SHMT2-225ENST00000556798 ZNF81P51508 661 aa14.91□□□□□ -0.02
SHMT2-225ENST00000556798 EGR3Q06889 387 aa14.91□□□□□ -0.02
SHMT2-225ENST00000556798 MFGE8Q08431 387 aaPredicted RBP14.91□□□□□ -0.02
SHMT2-225ENST00000556798 MOGQ16653 247 aa14.91□□□□□ -0.02
SHMT2-225ENST00000556798 TSTQ16762 297 aaKnown RBP14.91□□□□□ -0.02
SHMT2-225ENST00000556798 TIGD6Q17RP2 521 aa14.91□□□□□ -0.02
SHMT2-225ENST00000556798 CLEC12BQ2HXU8 276 aa14.91□□□□□ -0.02
SHMT2-225ENST00000556798 DEGS2Q6QHC5 323 aa14.91□□□□□ -0.02
SHMT2-225ENST00000556798 IZUMO2Q6UXV1 221 aa14.91□□□□□ -0.02
SHMT2-225ENST00000556798 C8orf59Q8N0T1 100 aaPredicted RBP14.91□□□□□ -0.02
SHMT2-225ENST00000556798 NIPAL2Q9H841 368 aa14.91□□□□□ -0.02
SHMT2-225ENST00000556798 EXOGQ9Y2C4 368 aaKnown RBP14.91□□□□□ -0.02
SHMT2-225ENST00000556798 TMEM269A0A1B0GVZ9 245 aa14.9□□□□□ -0.02
SHMT2-225ENST00000556798 H0YJX3 145 aa14.9□□□□□ -0.02
SHMT2-225ENST00000556798 XRCC2O43543 280 aa14.9□□□□□ -0.02
SHMT2-225ENST00000556798 ZNF254O75437 659 aa14.9□□□□□ -0.02
SHMT2-225ENST00000556798 IGHV1-46P01743 117 aa14.9□□□□□ -0.02
SHMT2-225ENST00000556798 KRT8P05787 483 aa14.9□□□□□ -0.02
SHMT2-225ENST00000556798 ERCC1P07992 297 aaPredicted RBP14.9□□□□□ -0.02
SHMT2-225ENST00000556798 ACTC1P68032 377 aa14.9□□□□□ -0.02
SHMT2-225ENST00000556798 ACTA1P68133 377 aa14.9□□□□□ -0.02
SHMT2-225ENST00000556798 PRSS57Q6UWY2 283 aa14.9□□□□□ -0.02
SHMT2-225ENST00000556798 Q6ZR03 302 aa14.9□□□□□ -0.02
SHMT2-225ENST00000556798 YIPF7Q8N8F6 280 aa14.9□□□□□ -0.02
SHMT2-225ENST00000556798 OR8B12Q8NGG6 310 aa14.9□□□□□ -0.02
SHMT2-225ENST00000556798 NEU4Q8WWR8 484 aaPredicted RBP14.9□□□□□ -0.02
SHMT2-225ENST00000556798 SGK3Q96BR1 496 aa14.9□□□□□ -0.02
SHMT2-225ENST00000556798 REEP6Q96HR9 211 aa14.9□□□□□ -0.02
SHMT2-225ENST00000556798 OR10A2Q9H208 303 aa14.9□□□□□ -0.02
SHMT2-225ENST00000556798 FAM206AQ9NX38 181 aa14.9□□□□□ -0.02
SHMT2-225ENST00000556798 GTF2A1LQ9UNN4 478 aa14.9□□□□□ -0.02
SHMT2-225ENST00000556798 MYRFQ9Y2G1 1151 aa14.9□□□□□ -0.02
SHMT2-225ENST00000556798 RPL36Q9Y3U8 105 aaKnown RBP14.9□□□□□ -0.02
SHMT2-225ENST00000556798 CR1P17927 2039 aa14.9□□□□□ -0.02
SHMT2-225ENST00000556798 DAPL1A0PJW8 107 aa14.89□□□□□ -0.03
SHMT2-225ENST00000556798 TRIM64A6NGJ6 449 aa14.89□□□□□ -0.03
SHMT2-225ENST00000556798 TRIM64BA6NI03 449 aa14.89□□□□□ -0.03
SHMT2-225ENST00000556798 IQCF6A8MYZ5 107 aa14.89□□□□□ -0.03
SHMT2-225ENST00000556798 RPP14O95059 124 aaKnown RBP14.89□□□□□ -0.03
SHMT2-225ENST00000556798 PNPP00491 289 aa14.89□□□□□ -0.03
SHMT2-225ENST00000556798 HPXP02790 462 aa14.89□□□□□ -0.03
SHMT2-225ENST00000556798 CCL8P80075 99 aa14.89□□□□□ -0.03
SHMT2-225ENST00000556798 CDK5R2Q13319 367 aa14.89□□□□□ -0.03
SHMT2-225ENST00000556798 CARTPTQ16568 116 aa14.89□□□□□ -0.03
SHMT2-225ENST00000556798 ZNF829Q3KNS6 432 aaPredicted RBP14.89□□□□□ -0.03
SHMT2-225ENST00000556798 TP53I3Q53FA7 332 aa14.89□□□□□ -0.03
SHMT2-225ENST00000556798 OR52H1Q8NGJ2 320 aa14.89□□□□□ -0.03
SHMT2-225ENST00000556798 OR52I1Q8NGK6 324 aa14.89□□□□□ -0.03
SHMT2-225ENST00000556798 RHNO1Q9BSD3 238 aa14.89□□□□□ -0.03
SHMT2-225ENST00000556798 REPIN1Q9BWE0 567 aaKnown RBP14.89□□□□□ -0.03
SHMT2-225ENST00000556798 SP140LQ9H930 580 aa14.89□□□□□ -0.03
SHMT2-225ENST00000556798 CYSLTR2Q9NS75 346 aa14.89□□□□□ -0.03
SHMT2-225ENST00000556798 CGGBP1Q9UFW8 167 aaPredicted RBP14.89□□□□□ -0.03
SHMT2-225ENST00000556798 HSPE1-MOB4S4R3N1 261 aa14.89□□□□□ -0.03
SHMT2-225ENST00000556798 DYSFO75923 2080 aa14.89□□□□□ -0.03
SHMT2-225ENST00000556798 GGT3PA6NGU5 568 aa14.88□□□□□ -0.03
SHMT2-225ENST00000556798 METTL15A6NJ78 407 aa14.88□□□□□ -0.03
SHMT2-225ENST00000556798 CD300LBA8K4G0 201 aa14.88□□□□□ -0.03
SHMT2-225ENST00000556798 LYNX1G3V0Z9 82 aa14.88□□□□□ -0.03
SHMT2-225ENST00000556798 TPD52L2O43399 206 aaKnown RBP14.88□□□□□ -0.03
SHMT2-225ENST00000556798 SRSF10O75494 262 aaKnown RBP14.88□□□□□ -0.03
SHMT2-225ENST00000556798 LYNX1P0DP58 116 aa14.88□□□□□ -0.03
SHMT2-225ENST00000556798 DAOP14920 347 aa14.88□□□□□ -0.03
SHMT2-225ENST00000556798 SELEP16581 610 aa14.88□□□□□ -0.03
SHMT2-225ENST00000556798 DCTDP32321 178 aa14.88□□□□□ -0.03
SHMT2-225ENST00000556798 LIPAP38571 399 aa14.88□□□□□ -0.03
SHMT2-225ENST00000556798 RAB40BQ12829 278 aa14.88□□□□□ -0.03
SHMT2-225ENST00000556798 SPRNQ5BIV9 151 aa14.88□□□□□ -0.03
SHMT2-225ENST00000556798 ZNF684Q5T5D7 378 aa14.88□□□□□ -0.03
SHMT2-225ENST00000556798 LAIR2Q6ISS4 152 aa14.88□□□□□ -0.03
SHMT2-225ENST00000556798 SPNS3Q6ZMD2 512 aa14.88□□□□□ -0.03
SHMT2-225ENST00000556798 THAP5Q7Z6K1 395 aa14.88□□□□□ -0.03
SHMT2-225ENST00000556798 ACBD7Q8N6N7 88 aa14.88□□□□□ -0.03
SHMT2-225ENST00000556798 OR8G5Q8NG78 346 aa14.88□□□□□ -0.03
SHMT2-225ENST00000556798 OR2Z1Q8NG97 314 aa14.88□□□□□ -0.03
SHMT2-225ENST00000556798 OR10AD1Q8NGE0 317 aa14.88□□□□□ -0.03
SHMT2-225ENST00000556798 OR56B2PQ8NGI1 322 aa14.88□□□□□ -0.03
SHMT2-225ENST00000556798 SPRYD4Q8WW59 207 aaPredicted RBP14.88□□□□□ -0.03
SHMT2-225ENST00000556798 PPP1R14AQ96A00 147 aa14.88□□□□□ -0.03
SHMT2-225ENST00000556798 SPSB4Q96A44 273 aa14.88□□□□□ -0.03
SHMT2-225ENST00000556798 SOX7Q9BT81 388 aa14.88□□□□□ -0.03
SHMT2-225ENST00000556798 PBOV1Q9GZY1 135 aa14.88□□□□□ -0.03
SHMT2-225ENST00000556798 ACOXLQ9NUZ1 547 aa14.88□□□□□ -0.03
SHMT2-225ENST00000556798 GNG8Q9UK08 70 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms