RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 MARS2Q96GW9 593 aaKnown RBP6.57□□□□□ -1.36
TDP1-214ENST00000556063 C4orf36Q96KX1 117 aa6.57□□□□□ -1.36
TDP1-214ENST00000556063 OR2J1Q9GZK6 312 aa6.57□□□□□ -1.36
TDP1-214ENST00000556063 CCDC90BQ9GZT6 254 aa6.57□□□□□ -1.36
TDP1-214ENST00000556063 MS4A5Q9H3V2 200 aa6.57□□□□□ -1.36
TDP1-214ENST00000556063 DUSP21Q9H596 190 aa6.57□□□□□ -1.36
TDP1-214ENST00000556063 CXorf56Q9H5V9 222 aa6.57□□□□□ -1.36
TDP1-214ENST00000556063 PLEKHF2Q9H8W4 249 aa6.57□□□□□ -1.36
TDP1-214ENST00000556063 DYNLRB1Q9NP97 96 aa6.57□□□□□ -1.36
TDP1-214ENST00000556063 CYSLTR2Q9NS75 346 aa6.57□□□□□ -1.36
TDP1-214ENST00000556063 PTTG3PQ9NZH4 202 aa6.57□□□□□ -1.36
TDP1-214ENST00000556063 NUFIP1Q9UHK0 495 aaKnown RBP6.57□□□□□ -1.36
TDP1-214ENST00000556063 MRM2Q9UI43 246 aaKnown RBP6.57□□□□□ -1.36
TDP1-214ENST00000556063 LRCH1Q9Y2L9 728 aa6.57□□□□□ -1.36
TDP1-214ENST00000556063 STARD10Q9Y365 291 aa6.57□□□□□ -1.36
TDP1-214ENST00000556063 NOP16Q9Y3C1 178 aaKnown RBP6.57□□□□□ -1.36
TDP1-214ENST00000556063 NAV2Q8IVL1 2488 aa6.57□□□□□ -1.36
TDP1-214ENST00000556063 SPENQ96T58 3664 aaKnown RBP6.57□□□□□ -1.36
TDP1-214ENST00000556063 IGLV3-9A0A075B6K5 115 aa6.56□□□□□ -1.36
TDP1-214ENST00000556063 A0A0U1RQV5 110 aa6.56□□□□□ -1.36
TDP1-214ENST00000556063 A0A1W2PPR1 153 aa6.56□□□□□ -1.36
TDP1-214ENST00000556063 TMEM129A0AVI4 362 aa6.56□□□□□ -1.36
TDP1-214ENST00000556063 GGT3PA6NGU5 568 aa6.56□□□□□ -1.36
TDP1-214ENST00000556063 PRR32B1ATL7 298 aa6.56□□□□□ -1.36
TDP1-214ENST00000556063 M0R233 179 aa6.56□□□□□ -1.36
TDP1-214ENST00000556063 TIMM8AO60220 97 aaPredicted RBP6.56□□□□□ -1.36
TDP1-214ENST00000556063 MTRF1O75570 445 aaKnown RBP6.56□□□□□ -1.36
TDP1-214ENST00000556063 IGHV3-13P01766 116 aa6.56□□□□□ -1.36
TDP1-214ENST00000556063 RAF1P04049 648 aa6.56□□□□□ -1.36
TDP1-214ENST00000556063 LIMS3P0CW19 117 aa6.56□□□□□ -1.36
TDP1-214ENST00000556063 LIMS4P0CW20 117 aa6.56□□□□□ -1.36
TDP1-214ENST00000556063 ATP6V1B1P15313 513 aa6.56□□□□□ -1.36
TDP1-214ENST00000556063 ZNF12P17014 697 aa6.56□□□□□ -1.36
TDP1-214ENST00000556063 DNASE1P24855 282 aa6.56□□□□□ -1.36
TDP1-214ENST00000556063 ETV1P50549 477 aa6.56□□□□□ -1.36
TDP1-214ENST00000556063 OR12D2P58182 307 aa6.56□□□□□ -1.36
TDP1-214ENST00000556063 TAS2R43P59537 309 aa6.56□□□□□ -1.36
TDP1-214ENST00000556063 GABARAPL2P60520 117 aa6.56□□□□□ -1.36
TDP1-214ENST00000556063 ERVS71-1P61550 626 aa6.56□□□□□ -1.36
TDP1-214ENST00000556063 SLC35A2P78381 396 aa6.56□□□□□ -1.36
TDP1-214ENST00000556063 NKPD1Q17RQ9 610 aa6.56□□□□□ -1.36
TDP1-214ENST00000556063 SNAI3Q3KNW1 292 aa6.56□□□□□ -1.36
TDP1-214ENST00000556063 SPATA46Q5T0L3 261 aa6.56□□□□□ -1.36
TDP1-214ENST00000556063 ZNF684Q5T5D7 378 aa6.56□□□□□ -1.36
TDP1-214ENST00000556063 RNLSQ5VYX0 342 aa6.56□□□□□ -1.36
TDP1-214ENST00000556063 FDX2Q6P4F2 183 aa6.56□□□□□ -1.36
TDP1-214ENST00000556063 PAMR1Q6UXH9 720 aa6.56□□□□□ -1.36
TDP1-214ENST00000556063 PRSS48Q7RTY5 328 aa6.56□□□□□ -1.36
TDP1-214ENST00000556063 DTX2Q86UW9 622 aa6.56□□□□□ -1.36
TDP1-214ENST00000556063 NAA40Q86UY6 237 aa6.56□□□□□ -1.36
TDP1-214ENST00000556063 COMMD2Q86X83 199 aa6.56□□□□□ -1.36
TDP1-214ENST00000556063 ELMOD2Q8IZ81 293 aa6.56□□□□□ -1.36
TDP1-214ENST00000556063 SVOPQ8N4V2 548 aa6.56□□□□□ -1.36
TDP1-214ENST00000556063 RFLNBQ8N5W9 214 aa6.56□□□□□ -1.36
TDP1-214ENST00000556063 CCDC54Q8NEL0 328 aa6.56□□□□□ -1.36
TDP1-214ENST00000556063 SPRYD4Q8WW59 207 aaPredicted RBP6.56□□□□□ -1.36
TDP1-214ENST00000556063 HAVCR1Q96D42 359 aa6.56□□□□□ -1.36
TDP1-214ENST00000556063 CMBLQ96DG6 245 aa6.56□□□□□ -1.36
TDP1-214ENST00000556063 TRMT61AQ96FX7 289 aaKnown RBP6.56□□□□□ -1.36
TDP1-214ENST00000556063 REEP6Q96HR9 211 aa6.56□□□□□ -1.36
TDP1-214ENST00000556063 SIGLEC11Q96RL6 698 aa6.56□□□□□ -1.36
TDP1-214ENST00000556063 CCL19Q99731 98 aa6.56□□□□□ -1.36
TDP1-214ENST00000556063 SYT3Q9BQG1 590 aa6.56□□□□□ -1.36
TDP1-214ENST00000556063 MND1Q9BWT6 205 aa6.56□□□□□ -1.36
TDP1-214ENST00000556063 CDCA4Q9BXL8 241 aa6.56□□□□□ -1.36
TDP1-214ENST00000556063 MRPL37Q9BZE1 423 aaKnown RBP6.56□□□□□ -1.36
TDP1-214ENST00000556063 PBOV1Q9GZY1 135 aa6.56□□□□□ -1.36
TDP1-214ENST00000556063 SLC22A4Q9H015 551 aa6.56□□□□□ -1.36
TDP1-214ENST00000556063 TRIM36Q9NQ86 728 aa6.56□□□□□ -1.36
TDP1-214ENST00000556063 ACOXLQ9NUZ1 547 aa6.56□□□□□ -1.36
TDP1-214ENST00000556063 FKBP14Q9NWM8 211 aa6.56□□□□□ -1.36
TDP1-214ENST00000556063 FAM206AQ9NX38 181 aa6.56□□□□□ -1.36
TDP1-214ENST00000556063 BABAM2Q9NXR7 383 aa6.56□□□□□ -1.36
TDP1-214ENST00000556063 UBAP1Q9NZ09 502 aa6.56□□□□□ -1.36
TDP1-214ENST00000556063 PURGQ9UJV8 347 aaKnown RBP6.56□□□□□ -1.36
TDP1-214ENST00000556063 OR52A1Q9UKL2 312 aa6.56□□□□□ -1.36
TDP1-214ENST00000556063 LAMP3Q9UQV4 416 aa6.56□□□□□ -1.36
TDP1-214ENST00000556063 RAI1Q7Z5J4 1906 aaPredicted RBP6.55□□□□□ -1.36
TDP1-214ENST00000556063 CENPEQ02224 2701 aa6.55□□□□□ -1.36
TDP1-214ENST00000556063 A0A1B0GVI7 797 aa6.55□□□□□ -1.36
TDP1-214ENST00000556063 MAGEB4O15481 346 aaPredicted RBP6.55□□□□□ -1.36
TDP1-214ENST00000556063 DANCRP0C864 163 aa6.55□□□□□ -1.36
TDP1-214ENST00000556063 UBCP0CG48 685 aaKnown RBP6.55□□□□□ -1.36
TDP1-214ENST00000556063 PRF1P14222 555 aa6.55□□□□□ -1.36
TDP1-214ENST00000556063 KITLGP21583 273 aa6.55□□□□□ -1.36
TDP1-214ENST00000556063 C21orf33P30042 268 aaPredicted RBP6.55□□□□□ -1.36
TDP1-214ENST00000556063 PSMB10P40306 273 aa6.55□□□□□ -1.36
TDP1-214ENST00000556063 MAP2K3P46734 347 aa6.55□□□□□ -1.36
TDP1-214ENST00000556063 TGM4P49221 684 aa6.55□□□□□ -1.36
TDP1-214ENST00000556063 CCR9P51686 369 aa6.55□□□□□ -1.36
TDP1-214ENST00000556063 WNT4P56705 351 aa6.55□□□□□ -1.36
TDP1-214ENST00000556063 ZNF92Q03936 586 aa6.55□□□□□ -1.36
TDP1-214ENST00000556063 PSG7Q13046 419 aa6.55□□□□□ -1.36
TDP1-214ENST00000556063 ALKBH1Q13686 389 aaKnown RBP6.55□□□□□ -1.36
TDP1-214ENST00000556063 GK2Q14410 553 aaPredicted RBP6.55□□□□□ -1.36
TDP1-214ENST00000556063 GFOD2Q3B7J2 385 aa6.55□□□□□ -1.36
TDP1-214ENST00000556063 KCTD21Q4G0X4 260 aa6.55□□□□□ -1.36
TDP1-214ENST00000556063 CCDC58Q4VC31 144 aa6.55□□□□□ -1.36
TDP1-214ENST00000556063 GLYATL3Q5SZD4 288 aa6.55□□□□□ -1.36
TDP1-214ENST00000556063 TMEM244Q5VVB8 128 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms