RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 LOC105371242A0A075B767 164 aa10.89□□□□□ -0.67
ACTN1-207ENST00000553290 F5H0A9 414 aaPredicted RBP10.89□□□□□ -0.67
ACTN1-207ENST00000553290 E2F6O75461 281 aa10.89□□□□□ -0.67
ACTN1-207ENST00000553290 DNAJC8O75937 253 aaPredicted RBP10.89□□□□□ -0.67
ACTN1-207ENST00000553290 HLA-DPB1P04440 258 aa10.89□□□□□ -0.67
ACTN1-207ENST00000553290 CLUP10909 449 aa10.89□□□□□ -0.67
ACTN1-207ENST00000553290 PSKH1P11801 424 aa10.89□□□□□ -0.67
ACTN1-207ENST00000553290 EPHA1P21709 976 aa10.89□□□□□ -0.67
ACTN1-207ENST00000553290 CD200P41217 278 aa10.89□□□□□ -0.67
ACTN1-207ENST00000553290 GATA4P43694 442 aa10.89□□□□□ -0.67
ACTN1-207ENST00000553290 SLC15A1P46059 708 aa10.89□□□□□ -0.67
ACTN1-207ENST00000553290 PRKXP51817 358 aa10.89□□□□□ -0.67
ACTN1-207ENST00000553290 RAD23AP54725 363 aa10.89□□□□□ -0.67
ACTN1-207ENST00000553290 HNRNPA0Q13151 305 aaKnown RBP10.89□□□□□ -0.67
ACTN1-207ENST00000553290 SNAI3Q3KNW1 292 aa10.89□□□□□ -0.67
ACTN1-207ENST00000553290 ESCO2Q56NI9 601 aa10.89□□□□□ -0.67
ACTN1-207ENST00000553290 LINC01590Q5TEZ4 76 aa10.89□□□□□ -0.67
ACTN1-207ENST00000553290 TMEM179BQ7Z7N9 219 aa10.89□□□□□ -0.67
ACTN1-207ENST00000553290 MOGAT3Q86VF5 341 aa10.89□□□□□ -0.67
ACTN1-207ENST00000553290 SPATA24Q86W54 205 aa10.89□□□□□ -0.67
ACTN1-207ENST00000553290 ZNF420Q8TAQ5 688 aaPredicted RBP10.89□□□□□ -0.67
ACTN1-207ENST00000553290 SLC7A6OSQ96CW6 309 aaPredicted RBP10.89□□□□□ -0.67
ACTN1-207ENST00000553290 REPIN1Q9BWE0 567 aaKnown RBP10.89□□□□□ -0.67
ACTN1-207ENST00000553290 OPA3Q9H6K4 179 aa10.89□□□□□ -0.67
ACTN1-207ENST00000553290 DNAJB9Q9UBS3 223 aa10.89□□□□□ -0.67
ACTN1-207ENST00000553290 LRCH1Q9Y2L9 728 aa10.89□□□□□ -0.67
ACTN1-207ENST00000553290 TCRBV3S1A0A5B6 114 aa10.88□□□□□ -0.67
ACTN1-207ENST00000553290 GGT3PA6NGU5 568 aa10.88□□□□□ -0.67
ACTN1-207ENST00000553290 CD300LBA8K4G0 201 aa10.88□□□□□ -0.67
ACTN1-207ENST00000553290 A8MXK9 166 aa10.88□□□□□ -0.67
ACTN1-207ENST00000553290 XRCC2O43543 280 aa10.88□□□□□ -0.67
ACTN1-207ENST00000553290 GMDSO60547 372 aa10.88□□□□□ -0.67
ACTN1-207ENST00000553290 GLCEO94923 617 aa10.88□□□□□ -0.67
ACTN1-207ENST00000553290 CYB5R3P00387 301 aaPredicted RBP10.88□□□□□ -0.67
ACTN1-207ENST00000553290 APOC1P02654 83 aa10.88□□□□□ -0.67
ACTN1-207ENST00000553290 HMGN1P05114 100 aa10.88□□□□□ -0.67
ACTN1-207ENST00000553290 ANXA8P13928 327 aa10.88□□□□□ -0.67
ACTN1-207ENST00000553290 ZFP36P26651 326 aaKnown RBP10.88□□□□□ -0.67
ACTN1-207ENST00000553290 POU1F1P28069 291 aa10.88□□□□□ -0.67
ACTN1-207ENST00000553290 GSTT1P30711 240 aa10.88□□□□□ -0.67
ACTN1-207ENST00000553290 RBMXP38159 391 aaKnown RBP10.88□□□□□ -0.67
ACTN1-207ENST00000553290 PRSS12P56730 875 aa10.88□□□□□ -0.67
ACTN1-207ENST00000553290 GRB2P62993 217 aaKnown RBP10.88□□□□□ -0.67
ACTN1-207ENST00000553290 ZNF92Q03936 586 aa10.88□□□□□ -0.67
ACTN1-207ENST00000553290 MAB21L1Q13394 359 aa10.88□□□□□ -0.67
ACTN1-207ENST00000553290 EIF2B1Q14232 305 aaKnown RBP10.88□□□□□ -0.67
ACTN1-207ENST00000553290 GINS1Q14691 196 aa10.88□□□□□ -0.67
ACTN1-207ENST00000553290 GLYATL3Q5SZD4 288 aa10.88□□□□□ -0.67
ACTN1-207ENST00000553290 USP43Q70EL4 1123 aa10.88□□□□□ -0.67
ACTN1-207ENST00000553290 RHOUQ7L0Q8 258 aa10.88□□□□□ -0.67
ACTN1-207ENST00000553290 SHFQ7M4L6 423 aa10.88□□□□□ -0.67
ACTN1-207ENST00000553290 ERI1Q8IV48 349 aaKnown RBP10.88□□□□□ -0.67
ACTN1-207ENST00000553290 IQCF1Q8N6M8 205 aa10.88□□□□□ -0.67
ACTN1-207ENST00000553290 OR11L1Q8NGX0 322 aa10.88□□□□□ -0.67
ACTN1-207ENST00000553290 OTULINQ96BN8 352 aa10.88□□□□□ -0.67
ACTN1-207ENST00000553290 INTS14Q96SY0 518 aa10.88□□□□□ -0.67
ACTN1-207ENST00000553290 TOR3AQ9H497 397 aa10.88□□□□□ -0.67
ACTN1-207ENST00000553290 SP140LQ9H930 580 aa10.88□□□□□ -0.67
ACTN1-207ENST00000553290 MED20Q9H944 212 aa10.88□□□□□ -0.67
ACTN1-207ENST00000553290 MARCH7Q9H992 704 aa10.88□□□□□ -0.67
ACTN1-207ENST00000553290 TMEM165Q9HC07 324 aa10.88□□□□□ -0.67
ACTN1-207ENST00000553290 MIOXQ9UGB7 285 aa10.88□□□□□ -0.67
ACTN1-207ENST00000553290 POMPQ9Y244 141 aa10.88□□□□□ -0.67
ACTN1-207ENST00000553290 IGHV3-64DA0A0J9YX35 117 aa10.87□□□□□ -0.67
ACTN1-207ENST00000553290 FAM183AA6NL82 134 aa10.87□□□□□ -0.67
ACTN1-207ENST00000553290 CEACAM18A8MTB9 384 aa10.87□□□□□ -0.67
ACTN1-207ENST00000553290 PRR23D1E9PI22 279 aaPredicted RBP10.87□□□□□ -0.67
ACTN1-207ENST00000553290 FKBP6O75344 327 aa10.87□□□□□ -0.67
ACTN1-207ENST00000553290 WNT2P09544 360 aa10.87□□□□□ -0.67
ACTN1-207ENST00000553290 PRR23D2P0DMB1 279 aaPredicted RBP10.87□□□□□ -0.67
ACTN1-207ENST00000553290 OSMP13725 252 aa10.87□□□□□ -0.67
ACTN1-207ENST00000553290 IRF2P14316 349 aa10.87□□□□□ -0.67
ACTN1-207ENST00000553290 CA6P23280 308 aa10.87□□□□□ -0.67
ACTN1-207ENST00000553290 HSD11B1P28845 292 aa10.87□□□□□ -0.67
ACTN1-207ENST00000553290 PMELP40967 661 aa10.87□□□□□ -0.67
ACTN1-207ENST00000553290 SEC61A1P61619 476 aaKnown RBP10.87□□□□□ -0.67
ACTN1-207ENST00000553290 CBX1P83916 185 aa10.87□□□□□ -0.67
ACTN1-207ENST00000553290 OR8G1Q15617 311 aa10.87□□□□□ -0.67
ACTN1-207ENST00000553290 DPY19L4Q7Z388 723 aa10.87□□□□□ -0.67
ACTN1-207ENST00000553290 KLBQ86Z14 1044 aa10.87□□□□□ -0.67
ACTN1-207ENST00000553290 SPERTQ8NA61 448 aa10.87□□□□□ -0.67
ACTN1-207ENST00000553290 PLPP7Q8NBV4 271 aa10.87□□□□□ -0.67
ACTN1-207ENST00000553290 PAPD5Q8NDF8 572 aaKnown RBP10.87□□□□□ -0.67
ACTN1-207ENST00000553290 OR6N2Q8NGY6 317 aa10.87□□□□□ -0.67
ACTN1-207ENST00000553290 OR2AE1Q8NHA4 323 aa10.87□□□□□ -0.67
ACTN1-207ENST00000553290 Q8TCH9 128 aa10.87□□□□□ -0.67
ACTN1-207ENST00000553290 ZFAND2BQ8WV99 257 aa10.87□□□□□ -0.67
ACTN1-207ENST00000553290 SPSB4Q96A44 273 aa10.87□□□□□ -0.67
ACTN1-207ENST00000553290 ADAT1Q9BUB4 502 aaKnown RBP10.87□□□□□ -0.67
ACTN1-207ENST00000553290 TEX12Q9BXU0 123 aa10.87□□□□□ -0.67
ACTN1-207ENST00000553290 OR51V1Q9H2C8 321 aa10.87□□□□□ -0.67
ACTN1-207ENST00000553290 MRPL15Q9P015 296 aaKnown RBP10.87□□□□□ -0.67
ACTN1-207ENST00000553290 OPN4Q9UHM6 478 aa10.87□□□□□ -0.67
ACTN1-207ENST00000553290 PPIAL4AQ9Y536 164 aa10.87□□□□□ -0.67
ACTN1-207ENST00000553290 TRAPPC2LH3BP13 241 aa10.86□□□□□ -0.67
ACTN1-207ENST00000553290 PRODHO43272 600 aa10.86□□□□□ -0.67
ACTN1-207ENST00000553290 VENTXO95231 258 aa10.86□□□□□ -0.67
ACTN1-207ENST00000553290 SLC2A1P11166 492 aa10.86□□□□□ -0.67
ACTN1-207ENST00000553290 RPS2P15880 293 aaKnown RBP10.86□□□□□ -0.67
ACTN1-207ENST00000553290 ZNF12P17014 697 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms