RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 BTN2A1Q7KYR7 527 aa16.46■□□□□ 0.23
LPCAT3-210ENST00000540090 BOLLQ8N9W6 283 aaKnown RBP16.46■□□□□ 0.23
LPCAT3-210ENST00000540090 CNTD2Q9H8S5 307 aa16.46■□□□□ 0.23
LPCAT3-210ENST00000540090 MRGBPQ9NV56 204 aa16.46■□□□□ 0.23
LPCAT3-210ENST00000540090 B9D1Q9UPM9 204 aa16.46■□□□□ 0.23
LPCAT3-210ENST00000540090 CD300LBA8K4G0 201 aa16.45■□□□□ 0.22
LPCAT3-210ENST00000540090 GMDSO60547 372 aa16.45■□□□□ 0.22
LPCAT3-210ENST00000540090 RPS6KA3P51812 740 aa16.45■□□□□ 0.22
LPCAT3-210ENST00000540090 FXYD6P3P58550 94 aa16.45■□□□□ 0.22
LPCAT3-210ENST00000540090 KLF10Q13118 480 aa16.45■□□□□ 0.22
LPCAT3-210ENST00000540090 SLC18B1Q6NT16 456 aa16.45■□□□□ 0.22
LPCAT3-210ENST00000540090 CFAP77Q6ZQR2 320 aa16.45■□□□□ 0.22
LPCAT3-210ENST00000540090 CBLL1Q75N03 491 aa16.45■□□□□ 0.22
LPCAT3-210ENST00000540090 TSEN54Q7Z6J9 526 aaKnown RBP16.45■□□□□ 0.22
LPCAT3-210ENST00000540090 OR6V1Q8N148 313 aa16.45■□□□□ 0.22
LPCAT3-210ENST00000540090 SLC26A10Q8NG04 563 aa16.45■□□□□ 0.22
LPCAT3-210ENST00000540090 PITX2Q99697 317 aa16.45■□□□□ 0.22
LPCAT3-210ENST00000540090 ATF6BQ99941 703 aa16.45■□□□□ 0.22
LPCAT3-210ENST00000540090 SRA1Q9HD15 236 aaKnown RBP16.45■□□□□ 0.22
LPCAT3-210ENST00000540090 KPTNQ9Y664 436 aa16.45■□□□□ 0.22
LPCAT3-210ENST00000540090 LOC100653049A0A140TA62 436 aa16.44■□□□□ 0.22
LPCAT3-210ENST00000540090 DVL1O14640 695 aa16.44■□□□□ 0.22
LPCAT3-210ENST00000540090 OR10H3O60404 316 aa16.44■□□□□ 0.22
LPCAT3-210ENST00000540090 KRT34O76011 436 aa16.44■□□□□ 0.22
LPCAT3-210ENST00000540090 ZNF682O95780 498 aa16.44■□□□□ 0.22
LPCAT3-210ENST00000540090 GYPAP02724 150 aa16.44■□□□□ 0.22
LPCAT3-210ENST00000540090 OMPP47874 163 aa16.44■□□□□ 0.22
LPCAT3-210ENST00000540090 TRAP1Q12931 704 aaKnown RBP16.44■□□□□ 0.22
LPCAT3-210ENST00000540090 CDONQ4KMG0 1287 aa16.44■□□□□ 0.22
LPCAT3-210ENST00000540090 PDZD9Q8IXQ8 264 aa16.44■□□□□ 0.22
LPCAT3-210ENST00000540090 PNRC2Q9NPJ4 139 aaKnown RBP16.44■□□□□ 0.22
LPCAT3-210ENST00000540090 CMTM6Q9NX76 183 aa16.44■□□□□ 0.22
LPCAT3-210ENST00000540090 GMPR2Q9P2T1 348 aaKnown RBP16.44■□□□□ 0.22
LPCAT3-210ENST00000540090 KAAG1Q9UBP8 84 aa16.44■□□□□ 0.22
LPCAT3-210ENST00000540090 RPUSD1Q9UJJ7 312 aaKnown RBP16.44■□□□□ 0.22
LPCAT3-210ENST00000540090 FAM96BQ9Y3D0 163 aa16.44■□□□□ 0.22
LPCAT3-210ENST00000540090 ZNF816-ZNF321PA0A0X1KG74 233 aa16.43■□□□□ 0.22
LPCAT3-210ENST00000540090 A0A1W2PRQ8 180 aa16.43■□□□□ 0.22
LPCAT3-210ENST00000540090 LHBP01229 141 aa16.43■□□□□ 0.22
LPCAT3-210ENST00000540090 CSF1P09603 554 aa16.43■□□□□ 0.22
LPCAT3-210ENST00000540090 DGCR6Q14129 220 aa16.43■□□□□ 0.22
LPCAT3-210ENST00000540090 MAPRE2Q15555 327 aa16.43■□□□□ 0.22
LPCAT3-210ENST00000540090 BEAN1Q3B7T3 259 aa16.43■□□□□ 0.22
LPCAT3-210ENST00000540090 DHRS7BQ6IAN0 325 aaPredicted RBP16.43■□□□□ 0.22
LPCAT3-210ENST00000540090 FKBP9P1Q75LS8 142 aa16.43■□□□□ 0.22
LPCAT3-210ENST00000540090 MRPL21Q7Z2W9 205 aaKnown RBP16.43■□□□□ 0.22
LPCAT3-210ENST00000540090 FAM90A1Q86YD7 464 aa16.43■□□□□ 0.22
LPCAT3-210ENST00000540090 LINC00346Q8IVM7 164 aa16.43■□□□□ 0.22
LPCAT3-210ENST00000540090 NPRL2Q8WTW4 380 aa16.43■□□□□ 0.22
LPCAT3-210ENST00000540090 RSRC1Q96IZ7 334 aaKnown RBP16.43■□□□□ 0.22
LPCAT3-210ENST00000540090 ADAT1Q9BUB4 502 aaKnown RBP16.43■□□□□ 0.22
LPCAT3-210ENST00000540090 TMEM120AQ9BXJ8 343 aa16.43■□□□□ 0.22
LPCAT3-210ENST00000540090 C1orf123Q9NWV4 160 aa16.43■□□□□ 0.22
LPCAT3-210ENST00000540090 CYB5R1Q9UHQ9 305 aa16.43■□□□□ 0.22
LPCAT3-210ENST00000540090 VPREB3Q9UKI3 123 aa16.43■□□□□ 0.22
LPCAT3-210ENST00000540090 AP3M1Q9Y2T2 418 aa16.43■□□□□ 0.22
LPCAT3-210ENST00000540090 ENPP4Q9Y6X5 453 aa16.43■□□□□ 0.22
LPCAT3-210ENST00000540090 A0A1B0GVI7 797 aa16.42■□□□□ 0.22
LPCAT3-210ENST00000540090 CXCR6O00574 342 aa16.42■□□□□ 0.22
LPCAT3-210ENST00000540090 GGT2P36268 569 aa16.42■□□□□ 0.22
LPCAT3-210ENST00000540090 TGFBR2P37173 567 aa16.42■□□□□ 0.22
LPCAT3-210ENST00000540090 TPTEP56180 551 aa16.42■□□□□ 0.22
LPCAT3-210ENST00000540090 SLC36A3Q495N2 470 aa16.42■□□□□ 0.22
LPCAT3-210ENST00000540090 METAP1DQ6UB28 335 aaPredicted RBP16.42■□□□□ 0.22
LPCAT3-210ENST00000540090 VMO1Q7Z5L0 202 aa16.42■□□□□ 0.22
LPCAT3-210ENST00000540090 CYP4Z1Q86W10 505 aa16.42■□□□□ 0.22
LPCAT3-210ENST00000540090 GCSAMQ8N6F7 178 aa16.42■□□□□ 0.22
LPCAT3-210ENST00000540090 SPERTQ8NA61 448 aa16.42■□□□□ 0.22
LPCAT3-210ENST00000540090 OR2AJ1Q8NGZ0 328 aa16.42■□□□□ 0.22
LPCAT3-210ENST00000540090 HSH2DQ96JZ2 352 aa16.42■□□□□ 0.22
LPCAT3-210ENST00000540090 SAR1AQ9NR31 198 aa16.42■□□□□ 0.22
LPCAT3-210ENST00000540090 CAB39Q9Y376 341 aaPredicted RBP16.42■□□□□ 0.22
LPCAT3-210ENST00000540090 G3V4G9 280 aa16.41■□□□□ 0.22
LPCAT3-210ENST00000540090 H1F0P07305 194 aaKnown RBP16.41■□□□□ 0.22
LPCAT3-210ENST00000540090 FBP1P09467 338 aa16.41■□□□□ 0.22
LPCAT3-210ENST00000540090 ZNF92Q03936 586 aa16.41■□□□□ 0.22
LPCAT3-210ENST00000540090 EGR3Q06889 387 aa16.41■□□□□ 0.22
LPCAT3-210ENST00000540090 DBPQ10586 325 aaPredicted RBP16.41■□□□□ 0.22
LPCAT3-210ENST00000540090 POU4F2Q12837 409 aa16.41■□□□□ 0.22
LPCAT3-210ENST00000540090 KPRPQ5T749 579 aaPredicted RBP16.41■□□□□ 0.22
LPCAT3-210ENST00000540090 TEX36Q5VZQ5 186 aa16.41■□□□□ 0.22
LPCAT3-210ENST00000540090 ZNF826PQ6ZT77 177 aa16.41■□□□□ 0.22
LPCAT3-210ENST00000540090 ZBTB46Q86UZ6 589 aa16.41■□□□□ 0.22
LPCAT3-210ENST00000540090 SLC15A3Q8IY34 581 aa16.41■□□□□ 0.22
LPCAT3-210ENST00000540090 LY6G5BQ8NDX9 201 aa16.41■□□□□ 0.22
LPCAT3-210ENST00000540090 DMRTB1Q96MA1 342 aa16.41■□□□□ 0.22
LPCAT3-210ENST00000540090 ERMAPQ96PL5 475 aaPredicted RBP16.41■□□□□ 0.22
LPCAT3-210ENST00000540090 NMNAT3Q96T66 252 aa16.41■□□□□ 0.22
LPCAT3-210ENST00000540090 MRPL15Q9P015 296 aaKnown RBP16.41■□□□□ 0.22
LPCAT3-210ENST00000540090 ZNRD1Q9P1U0 126 aa16.41■□□□□ 0.22
LPCAT3-210ENST00000540090 AURKCQ9UQB9 309 aa16.41■□□□□ 0.22
LPCAT3-210ENST00000540090 BTBD17A6NE02 478 aa16.4■□□□□ 0.22
LPCAT3-210ENST00000540090 UNC119BA6NIH7 251 aa16.4■□□□□ 0.22
LPCAT3-210ENST00000540090 M0R135 149 aa16.4■□□□□ 0.22
LPCAT3-210ENST00000540090 ALX3O95076 343 aa16.4■□□□□ 0.22
LPCAT3-210ENST00000540090 GRPP07492 148 aa16.4■□□□□ 0.22
LPCAT3-210ENST00000540090 SNAI3Q3KNW1 292 aa16.4■□□□□ 0.22
LPCAT3-210ENST00000540090 SMARCD3Q6STE5 483 aa16.4■□□□□ 0.22
LPCAT3-210ENST00000540090 GALNT4Q8N4A0 578 aa16.4■□□□□ 0.22
LPCAT3-210ENST00000540090 ST8SIA4Q92187 359 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms