RNA–Protein interactions for RNA: ENST00000532538.1

BRPF3-210, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 4

Gene BRPF3, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-210ENST00000532538 GRPP07492 148 aa12.64□□□□□ -0.39
BRPF3-210ENST00000532538 HIST1H1CP16403 213 aaKnown RBP12.64□□□□□ -0.39
BRPF3-210ENST00000532538 CFHR2P36980 270 aa12.64□□□□□ -0.39
BRPF3-210ENST00000532538 CD200P41217 278 aa12.64□□□□□ -0.39
BRPF3-210ENST00000532538 GATA4P43694 442 aa12.64□□□□□ -0.39
BRPF3-210ENST00000532538 SMIM11AP58511 58 aa12.64□□□□□ -0.39
BRPF3-210ENST00000532538 HIST1H3AP68431 136 aa12.64□□□□□ -0.39
BRPF3-210ENST00000532538 DBPQ10586 325 aaPredicted RBP12.64□□□□□ -0.39
BRPF3-210ENST00000532538 SEC23BQ15437 767 aa12.64□□□□□ -0.39
BRPF3-210ENST00000532538 TAF13Q15543 124 aa12.64□□□□□ -0.39
BRPF3-210ENST00000532538 HIST2H3PS2Q5TEC6 136 aa12.64□□□□□ -0.39
BRPF3-210ENST00000532538 SLC18B1Q6NT16 456 aa12.64□□□□□ -0.39
BRPF3-210ENST00000532538 Q6YL49 198 aa12.64□□□□□ -0.39
BRPF3-210ENST00000532538 HIST2H3AQ71DI3 136 aa12.64□□□□□ -0.39
BRPF3-210ENST00000532538 PNLDC1Q8NA58 520 aaKnown RBP12.64□□□□□ -0.39
BRPF3-210ENST00000532538 SDR9C7Q8NEX9 313 aa12.64□□□□□ -0.39
BRPF3-210ENST00000532538 SLC26A10Q8NG04 563 aa12.64□□□□□ -0.39
BRPF3-210ENST00000532538 TBC1D15Q8TC07 691 aa12.64□□□□□ -0.39
BRPF3-210ENST00000532538 LHX4Q969G2 390 aa12.64□□□□□ -0.39
BRPF3-210ENST00000532538 CHIAQ9BZP6 476 aa12.64□□□□□ -0.39
BRPF3-210ENST00000532538 SLC22A4Q9H015 551 aa12.64□□□□□ -0.39
BRPF3-210ENST00000532538 NDUFAF4Q9P032 175 aa12.64□□□□□ -0.39
BRPF3-210ENST00000532538 MMP24Q9Y5R2 645 aa12.64□□□□□ -0.39
BRPF3-210ENST00000532538 IGLV1-36A0A0B4J1U3 117 aa12.63□□□□□ -0.39
BRPF3-210ENST00000532538 TRAV38-1A0A0B4J264 116 aa12.63□□□□□ -0.39
BRPF3-210ENST00000532538 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.63□□□□□ -0.39
BRPF3-210ENST00000532538 ZNF879B4DU55 563 aa12.63□□□□□ -0.39
BRPF3-210ENST00000532538 M0R135 149 aa12.63□□□□□ -0.39
BRPF3-210ENST00000532538 LGALS8O00214 317 aa12.63□□□□□ -0.39
BRPF3-210ENST00000532538 TIMM23O14925 209 aa12.63□□□□□ -0.39
BRPF3-210ENST00000532538 FSTL3O95633 263 aa12.63□□□□□ -0.39
BRPF3-210ENST00000532538 LIPFP07098 398 aa12.63□□□□□ -0.39
BRPF3-210ENST00000532538 MELTFP08582 738 aa12.63□□□□□ -0.39
BRPF3-210ENST00000532538 FXYD6P3P58550 94 aa12.63□□□□□ -0.39
BRPF3-210ENST00000532538 RFX4Q33E94 735 aa12.63□□□□□ -0.39
BRPF3-210ENST00000532538 SLC35F1Q5T1Q4 408 aa12.63□□□□□ -0.39
BRPF3-210ENST00000532538 PDZD9Q8IXQ8 264 aa12.63□□□□□ -0.39
BRPF3-210ENST00000532538 Q8TCH9 128 aa12.63□□□□□ -0.39
BRPF3-210ENST00000532538 WFDC12Q8WWY7 111 aa12.63□□□□□ -0.39
BRPF3-210ENST00000532538 MCUR1Q96AQ8 359 aa12.63□□□□□ -0.39
BRPF3-210ENST00000532538 ZNF799Q96GE5 643 aa12.63□□□□□ -0.39
BRPF3-210ENST00000532538 TRIM15Q9C019 465 aa12.63□□□□□ -0.39
BRPF3-210ENST00000532538 RASSF4Q9H2L5 321 aa12.63□□□□□ -0.39
BRPF3-210ENST00000532538 TRIM36Q9NQ86 728 aa12.63□□□□□ -0.39
BRPF3-210ENST00000532538 ACOXLQ9NUZ1 547 aa12.63□□□□□ -0.39
BRPF3-210ENST00000532538 C1orf123Q9NWV4 160 aa12.63□□□□□ -0.39
BRPF3-210ENST00000532538 CLPSL1A2RUU4 121 aa12.62□□□□□ -0.39
BRPF3-210ENST00000532538 CD300LBA8K4G0 201 aa12.62□□□□□ -0.39
BRPF3-210ENST00000532538 GYPAP02724 150 aa12.62□□□□□ -0.39
BRPF3-210ENST00000532538 IFNGR2P38484 337 aa12.62□□□□□ -0.39
BRPF3-210ENST00000532538 PSME3P61289 254 aa12.62□□□□□ -0.39
BRPF3-210ENST00000532538 ARF6P62330 175 aa12.62□□□□□ -0.39
BRPF3-210ENST00000532538 HOXA4Q00056 320 aaPredicted RBP12.62□□□□□ -0.39
BRPF3-210ENST00000532538 MZT1Q08AG7 82 aa12.62□□□□□ -0.39
BRPF3-210ENST00000532538 PDCD1Q15116 288 aa12.62□□□□□ -0.39
BRPF3-210ENST00000532538 CLEC12AQ5QGZ9 265 aa12.62□□□□□ -0.39
BRPF3-210ENST00000532538 ZNF841Q6ZN19 808 aa12.62□□□□□ -0.39
BRPF3-210ENST00000532538 ZNF620Q6ZNG0 422 aa12.62□□□□□ -0.39
BRPF3-210ENST00000532538 COLCA1Q6ZS62 124 aa12.62□□□□□ -0.39
BRPF3-210ENST00000532538 TSEN54Q7Z6J9 526 aaKnown RBP12.62□□□□□ -0.39
BRPF3-210ENST00000532538 RNF148Q8N7C7 305 aa12.62□□□□□ -0.39
BRPF3-210ENST00000532538 PROKR2Q8NFJ6 384 aa12.62□□□□□ -0.39
BRPF3-210ENST00000532538 OR2AE1Q8NHA4 323 aa12.62□□□□□ -0.39
BRPF3-210ENST00000532538 SSMEM1Q8WWF3 244 aa12.62□□□□□ -0.39
BRPF3-210ENST00000532538 ST8SIA4Q92187 359 aa12.62□□□□□ -0.39
BRPF3-210ENST00000532538 DACT3Q96B18 629 aaPredicted RBP12.62□□□□□ -0.39
BRPF3-210ENST00000532538 WDFY2Q96P53 400 aa12.62□□□□□ -0.39
BRPF3-210ENST00000532538 C1RLQ9NZP8 487 aa12.62□□□□□ -0.39
BRPF3-210ENST00000532538 PDP1Q9P0J1 537 aaPredicted RBP12.62□□□□□ -0.39
BRPF3-210ENST00000532538 FAM96BQ9Y3D0 163 aa12.62□□□□□ -0.39
BRPF3-210ENST00000532538 RNF114Q9Y508 228 aa12.62□□□□□ -0.39
BRPF3-210ENST00000532538 CENPVL3A0A0U1RRI6 287 aa12.61□□□□□ -0.39
BRPF3-210ENST00000532538 OOEPA6NGQ2 149 aa12.61□□□□□ -0.39
BRPF3-210ENST00000532538 NDUFA2O43678 99 aa12.61□□□□□ -0.39
BRPF3-210ENST00000532538 GMDSO60547 372 aa12.61□□□□□ -0.39
BRPF3-210ENST00000532538 PYCR1P32322 319 aa12.61□□□□□ -0.39
BRPF3-210ENST00000532538 PSMB10P40306 273 aa12.61□□□□□ -0.39
BRPF3-210ENST00000532538 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.61□□□□□ -0.39
BRPF3-210ENST00000532538 POU4F2Q12837 409 aa12.61□□□□□ -0.39
BRPF3-210ENST00000532538 RSPO1Q2MKA7 263 aaPredicted RBP12.61□□□□□ -0.39
BRPF3-210ENST00000532538 TMEM86BQ8N661 226 aa12.61□□□□□ -0.39
BRPF3-210ENST00000532538 OR52L1Q8NGH7 329 aa12.61□□□□□ -0.39
BRPF3-210ENST00000532538 OR4C15Q8NGM1 316 aa12.61□□□□□ -0.39
BRPF3-210ENST00000532538 OR8S1Q8NH09 359 aa12.61□□□□□ -0.39
BRPF3-210ENST00000532538 COPS4Q9BT78 406 aa12.61□□□□□ -0.39
BRPF3-210ENST00000532538 CENPMQ9NSP4 180 aa12.61□□□□□ -0.39
BRPF3-210ENST00000532538 DCAF13Q9NV06 445 aaKnown RBP12.61□□□□□ -0.39
BRPF3-210ENST00000532538 CTSZQ9UBR2 303 aa12.61□□□□□ -0.39
BRPF3-210ENST00000532538 CYB5R1Q9UHQ9 305 aa12.61□□□□□ -0.39
BRPF3-210ENST00000532538 POMT1Q9Y6A1 747 aa12.61□□□□□ -0.39
BRPF3-210ENST00000532538 IGHV3OR15-7A0A075B7D8 119 aa12.6□□□□□ -0.39
BRPF3-210ENST00000532538 IGHV1-69DA0A0B4J2H0 117 aa12.6□□□□□ -0.39
BRPF3-210ENST00000532538 OR6C68A6NDL8 312 aa12.6□□□□□ -0.39
BRPF3-210ENST00000532538 BTBD17A6NE02 478 aa12.6□□□□□ -0.39
BRPF3-210ENST00000532538 TVP23AA6NH52 213 aa12.6□□□□□ -0.39
BRPF3-210ENST00000532538 TNFRSF13BO14836 293 aaPredicted RBP12.6□□□□□ -0.39
BRPF3-210ENST00000532538 ARPC3O15145 178 aa12.6□□□□□ -0.39
BRPF3-210ENST00000532538 TBX1O43435 398 aa12.6□□□□□ -0.39
BRPF3-210ENST00000532538 NDUFA7O95182 113 aa12.6□□□□□ -0.39
BRPF3-210ENST00000532538 IGHV1-69P01742 117 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms