RNA–Protein interactions for RNA: ENST00000530790.5

VPS28-211, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-211ENST00000530790 PPIAL4CA0A0B4J2A2 164 aa11.19□□□□□ -0.62
VPS28-211ENST00000530790 A0A1B0GWJ7 208 aa11.19□□□□□ -0.62
VPS28-211ENST00000530790 GGT3PA6NGU5 568 aa11.19□□□□□ -0.62
VPS28-211ENST00000530790 FAM183AA6NL82 134 aa11.19□□□□□ -0.62
VPS28-211ENST00000530790 CEACAM18A8MTB9 384 aa11.19□□□□□ -0.62
VPS28-211ENST00000530790 A8MXK9 166 aa11.19□□□□□ -0.62
VPS28-211ENST00000530790 F5H0A9 414 aaPredicted RBP11.19□□□□□ -0.62
VPS28-211ENST00000530790 PPIAL4DF5H284 164 aa11.19□□□□□ -0.62
VPS28-211ENST00000530790 CYB5R3P00387 301 aaPredicted RBP11.19□□□□□ -0.62
VPS28-211ENST00000530790 AVPP01185 164 aa11.19□□□□□ -0.62
VPS28-211ENST00000530790 HLA-DPB1P04440 258 aa11.19□□□□□ -0.62
VPS28-211ENST00000530790 PPIAL4FP0DN26 164 aa11.19□□□□□ -0.62
VPS28-211ENST00000530790 IRF2P14316 349 aa11.19□□□□□ -0.62
VPS28-211ENST00000530790 POU1F1P28069 291 aa11.19□□□□□ -0.62
VPS28-211ENST00000530790 HSD11B1P28845 292 aa11.19□□□□□ -0.62
VPS28-211ENST00000530790 SLC15A1P46059 708 aa11.19□□□□□ -0.62
VPS28-211ENST00000530790 PRKXP51817 358 aa11.19□□□□□ -0.62
VPS28-211ENST00000530790 SEC61A1P61619 476 aaKnown RBP11.19□□□□□ -0.62
VPS28-211ENST00000530790 GRB2P62993 217 aaKnown RBP11.19□□□□□ -0.62
VPS28-211ENST00000530790 EIF2B1Q14232 305 aaKnown RBP11.19□□□□□ -0.62
VPS28-211ENST00000530790 ZNF181Q2M3W8 571 aa11.19□□□□□ -0.62
VPS28-211ENST00000530790 TEX30Q5JUR7 227 aa11.19□□□□□ -0.62
VPS28-211ENST00000530790 GLYATL3Q5SZD4 288 aa11.19□□□□□ -0.62
VPS28-211ENST00000530790 SPATC1Q76KD6 591 aa11.19□□□□□ -0.62
VPS28-211ENST00000530790 ERI1Q8IV48 349 aaKnown RBP11.19□□□□□ -0.62
VPS28-211ENST00000530790 CELF2-AS1Q8N7Q2 184 aa11.19□□□□□ -0.62
VPS28-211ENST00000530790 OR6N2Q8NGY6 317 aa11.19□□□□□ -0.62
VPS28-211ENST00000530790 OR2AE1Q8NHA4 323 aa11.19□□□□□ -0.62
VPS28-211ENST00000530790 NANPQ8TBE9 248 aa11.19□□□□□ -0.62
VPS28-211ENST00000530790 INTS14Q96SY0 518 aa11.19□□□□□ -0.62
VPS28-211ENST00000530790 KCNJ15Q99712 375 aa11.19□□□□□ -0.62
VPS28-211ENST00000530790 SLC22A4Q9H015 551 aa11.19□□□□□ -0.62
VPS28-211ENST00000530790 OPA3Q9H6K4 179 aa11.19□□□□□ -0.62
VPS28-211ENST00000530790 MED20Q9H944 212 aa11.19□□□□□ -0.62
VPS28-211ENST00000530790 FAM53CQ9NYF3 392 aa11.19□□□□□ -0.62
VPS28-211ENST00000530790 OR5V1Q9UGF6 321 aa11.19□□□□□ -0.62
VPS28-211ENST00000530790 LRCH1Q9Y2L9 728 aa11.19□□□□□ -0.62
VPS28-211ENST00000530790 CD300LBA8K4G0 201 aa11.18□□□□□ -0.62
VPS28-211ENST00000530790 XRCC2O43543 280 aa11.18□□□□□ -0.62
VPS28-211ENST00000530790 FKBP6O75344 327 aa11.18□□□□□ -0.62
VPS28-211ENST00000530790 DNAJC8O75937 253 aaPredicted RBP11.18□□□□□ -0.62
VPS28-211ENST00000530790 GLCEO94923 617 aa11.18□□□□□ -0.62
VPS28-211ENST00000530790 SLC2A1P11166 492 aa11.18□□□□□ -0.62
VPS28-211ENST00000530790 RPS2P15880 293 aaKnown RBP11.18□□□□□ -0.62
VPS28-211ENST00000530790 ADRA2CP18825 462 aa11.18□□□□□ -0.62
VPS28-211ENST00000530790 ZFP36P26651 326 aaKnown RBP11.18□□□□□ -0.62
VPS28-211ENST00000530790 GSTT1P30711 240 aa11.18□□□□□ -0.62
VPS28-211ENST00000530790 CD200P41217 278 aa11.18□□□□□ -0.62
VPS28-211ENST00000530790 GATA4P43694 442 aa11.18□□□□□ -0.62
VPS28-211ENST00000530790 CX3CR1P49238 355 aa11.18□□□□□ -0.62
VPS28-211ENST00000530790 CBX1P83916 185 aa11.18□□□□□ -0.62
VPS28-211ENST00000530790 ZNF92Q03936 586 aa11.18□□□□□ -0.62
VPS28-211ENST00000530790 OR8G1Q15617 311 aa11.18□□□□□ -0.62
VPS28-211ENST00000530790 LINC01590Q5TEZ4 76 aa11.18□□□□□ -0.62
VPS28-211ENST00000530790 TMEM179BQ7Z7N9 219 aa11.18□□□□□ -0.62
VPS28-211ENST00000530790 HS3ST5Q8IZT8 346 aa11.18□□□□□ -0.62
VPS28-211ENST00000530790 SEMA6DQ8NFY4 1073 aa11.18□□□□□ -0.62
VPS28-211ENST00000530790 OR11L1Q8NGX0 322 aa11.18□□□□□ -0.62
VPS28-211ENST00000530790 ERGIC1Q969X5 290 aa11.18□□□□□ -0.62
VPS28-211ENST00000530790 TOR3AQ9H497 397 aa11.18□□□□□ -0.62
VPS28-211ENST00000530790 MRPL15Q9P015 296 aaKnown RBP11.18□□□□□ -0.62
VPS28-211ENST00000530790 DNAJB9Q9UBS3 223 aa11.18□□□□□ -0.62
VPS28-211ENST00000530790 N6AMT1Q9Y5N5 214 aa11.18□□□□□ -0.62
VPS28-211ENST00000530790 FBN3Q75N90 2809 aa11.18□□□□□ -0.62
VPS28-211ENST00000530790 DYSFO75923 2080 aa11.18□□□□□ -0.62
VPS28-211ENST00000530790 TCRBV3S1A0A5B6 114 aa11.17□□□□□ -0.62
VPS28-211ENST00000530790 PRR23D1E9PI22 279 aaPredicted RBP11.17□□□□□ -0.62
VPS28-211ENST00000530790 TBX1O43435 398 aa11.17□□□□□ -0.62
VPS28-211ENST00000530790 RGS9O75916 674 aaPredicted RBP11.17□□□□□ -0.62
VPS28-211ENST00000530790 ZNF205O95201 554 aa11.17□□□□□ -0.62
VPS28-211ENST00000530790 APOC1P02654 83 aa11.17□□□□□ -0.62
VPS28-211ENST00000530790 ANXA2P07355 339 aaKnown RBP11.17□□□□□ -0.62
VPS28-211ENST00000530790 PRR23D2P0DMB1 279 aaPredicted RBP11.17□□□□□ -0.62
VPS28-211ENST00000530790 OSMP13725 252 aa11.17□□□□□ -0.62
VPS28-211ENST00000530790 ANXA8P13928 327 aa11.17□□□□□ -0.62
VPS28-211ENST00000530790 CA6P23280 308 aa11.17□□□□□ -0.62
VPS28-211ENST00000530790 ANOS1P23352 680 aa11.17□□□□□ -0.62
VPS28-211ENST00000530790 CPT2P23786 658 aa11.17□□□□□ -0.62
VPS28-211ENST00000530790 MAB21L1Q13394 359 aa11.17□□□□□ -0.62
VPS28-211ENST00000530790 GINS1Q14691 196 aa11.17□□□□□ -0.62
VPS28-211ENST00000530790 ARMCX4Q5H9R4 360 aa11.17□□□□□ -0.62
VPS28-211ENST00000530790 PRAMEF6Q5VXH4 476 aa11.17□□□□□ -0.62
VPS28-211ENST00000530790 SHFQ7M4L6 423 aa11.17□□□□□ -0.62
VPS28-211ENST00000530790 NLRC3Q7RTR2 1065 aa11.17□□□□□ -0.62
VPS28-211ENST00000530790 DPY19L4Q7Z388 723 aa11.17□□□□□ -0.62
VPS28-211ENST00000530790 OR56B2PQ8NGI1 322 aa11.17□□□□□ -0.62
VPS28-211ENST00000530790 Q8TCH9 128 aa11.17□□□□□ -0.62
VPS28-211ENST00000530790 SLC7A6OSQ96CW6 309 aaPredicted RBP11.17□□□□□ -0.62
VPS28-211ENST00000530790 PLEKHA8Q96JA3 519 aa11.17□□□□□ -0.62
VPS28-211ENST00000530790 MRI1Q9BV20 369 aa11.17□□□□□ -0.62
VPS28-211ENST00000530790 SSBP3Q9BWW4 388 aaPredicted RBP11.17□□□□□ -0.62
VPS28-211ENST00000530790 TEX12Q9BXU0 123 aa11.17□□□□□ -0.62
VPS28-211ENST00000530790 OR51V1Q9H2C8 321 aa11.17□□□□□ -0.62
VPS28-211ENST00000530790 SP140LQ9H930 580 aa11.17□□□□□ -0.62
VPS28-211ENST00000530790 KIF17Q9P2E2 1029 aa11.17□□□□□ -0.62
VPS28-211ENST00000530790 MIOXQ9UGB7 285 aa11.17□□□□□ -0.62
VPS28-211ENST00000530790 OPN4Q9UHM6 478 aa11.17□□□□□ -0.62
VPS28-211ENST00000530790 POMPQ9Y244 141 aa11.17□□□□□ -0.62
VPS28-211ENST00000530790 POLR3KQ9Y2Y1 108 aaPredicted RBP11.17□□□□□ -0.62
VPS28-211ENST00000530790 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms