RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 ELMOD3Q96FG2 381 aa10.69□□□□□ -0.7
VEGFA-225ENST00000523950 MBOAT4Q96T53 435 aa10.69□□□□□ -0.7
VEGFA-225ENST00000523950 AMELYQ99218 206 aa10.69□□□□□ -0.7
VEGFA-225ENST00000523950 SLC29A1Q99808 456 aa10.69□□□□□ -0.7
VEGFA-225ENST00000523950 MROQ9BYG7 248 aa10.69□□□□□ -0.7
VEGFA-225ENST00000523950 SAP30LQ9HAJ7 183 aa10.69□□□□□ -0.7
VEGFA-225ENST00000523950 ADGRL4Q9HBW9 690 aa10.69□□□□□ -0.7
VEGFA-225ENST00000523950 SMPD3Q9NY59 655 aaPredicted RBP10.69□□□□□ -0.7
VEGFA-225ENST00000523950 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.69□□□□□ -0.73e-7■■□□□ 12.6
VEGFA-225ENST00000523950 NOP16Q9Y3C1 178 aaKnown RBP10.69□□□□□ -0.7
VEGFA-225ENST00000523950 GMPPBQ9Y5P6 360 aa10.69□□□□□ -0.7
VEGFA-225ENST00000523950 A0A096LNT2 108 aa10.68□□□□□ -0.7
VEGFA-225ENST00000523950 A0A1B0GWJ7 208 aa10.68□□□□□ -0.7
VEGFA-225ENST00000523950 ACOD1A6NK06 481 aa10.68□□□□□ -0.7
VEGFA-225ENST00000523950 SLC16A6O15403 523 aa10.68□□□□□ -0.7
VEGFA-225ENST00000523950 TPD52L2O43399 206 aaKnown RBP10.68□□□□□ -0.7
VEGFA-225ENST00000523950 NCR1O76036 304 aa10.68□□□□□ -0.7
VEGFA-225ENST00000523950 ANXA2P07355 339 aaKnown RBP10.68□□□□□ -0.7
VEGFA-225ENST00000523950 MRPL3P09001 348 aaKnown RBP10.68□□□□□ -0.7
VEGFA-225ENST00000523950 SBK2P0C263 348 aa10.68□□□□□ -0.7
VEGFA-225ENST00000523950 TNFRSF1AP19438 455 aa10.68□□□□□ -0.7
VEGFA-225ENST00000523950 USF1P22415 310 aaPredicted RBP10.68□□□□□ -0.7
VEGFA-225ENST00000523950 DDOSTP39656 456 aa10.68□□□□□ -0.7
VEGFA-225ENST00000523950 TMEM33P57088 247 aa10.68□□□□□ -0.7
VEGFA-225ENST00000523950 ZNF121P58317 390 aaPredicted RBP10.68□□□□□ -0.7
VEGFA-225ENST00000523950 PSMA6P60900 246 aaKnown RBP10.68□□□□□ -0.7
VEGFA-225ENST00000523950 EGR3Q06889 387 aa10.68□□□□□ -0.7
VEGFA-225ENST00000523950 MED21Q13503 144 aa10.68□□□□□ -0.7
VEGFA-225ENST00000523950 RIN1Q13671 783 aa10.68□□□□□ -0.7
VEGFA-225ENST00000523950 HLXQ14774 488 aaPredicted RBP10.68□□□□□ -0.7
VEGFA-225ENST00000523950 TRIP10Q15642 601 aa10.68□□□□□ -0.7
VEGFA-225ENST00000523950 CARTPTQ16568 116 aa10.68□□□□□ -0.7
VEGFA-225ENST00000523950 OCLNQ16625 522 aa10.68□□□□□ -0.7
VEGFA-225ENST00000523950 TSTQ16762 297 aaKnown RBP10.68□□□□□ -0.7
VEGFA-225ENST00000523950 OR2T2Q6IF00 324 aa10.68□□□□□ -0.7
VEGFA-225ENST00000523950 SPATC1Q76KD6 591 aa10.68□□□□□ -0.7
VEGFA-225ENST00000523950 BCDIN3DQ7Z5W3 292 aaKnown RBP10.68□□□□□ -0.7
VEGFA-225ENST00000523950 SLC35F2Q8IXU6 374 aa10.68□□□□□ -0.7
VEGFA-225ENST00000523950 OR13G1Q8NGZ3 307 aa10.68□□□□□ -0.7
VEGFA-225ENST00000523950 SPSB4Q96A44 273 aa10.68□□□□□ -0.7
VEGFA-225ENST00000523950 OR8B4Q96RC9 309 aa10.68□□□□□ -0.7
VEGFA-225ENST00000523950 SLC30A2Q9BRI3 323 aa10.68□□□□□ -0.7
VEGFA-225ENST00000523950 REPIN1Q9BWE0 567 aaKnown RBP10.68□□□□□ -0.7
VEGFA-225ENST00000523950 SLC22A4Q9H015 551 aa10.68□□□□□ -0.7
VEGFA-225ENST00000523950 OR10A2Q9H208 303 aa10.68□□□□□ -0.7
VEGFA-225ENST00000523950 RGCCQ9H4X1 137 aa10.68□□□□□ -0.7
VEGFA-225ENST00000523950 MSL2Q9HCI7 577 aa10.68□□□□□ -0.7
VEGFA-225ENST00000523950 CLN6Q9NWW5 311 aa10.68□□□□□ -0.7
VEGFA-225ENST00000523950 IL19Q9UHD0 177 aa10.68□□□□□ -0.7
VEGFA-225ENST00000523950 ZNF391Q9UJN7 358 aa10.68□□□□□ -0.7
VEGFA-225ENST00000523950 KLHDC2Q9Y2U9 406 aa10.68□□□□□ -0.7
VEGFA-225ENST00000523950 IGHV1-69-2A0A0G2JMI3 117 aa10.67□□□□□ -0.7
VEGFA-225ENST00000523950 LOC100130705A0A1B0GUX0 176 aa10.67□□□□□ -0.7
VEGFA-225ENST00000523950 ZNF670-ZNF695F2Z2N8 137 aa10.67□□□□□ -0.7
VEGFA-225ENST00000523950 SMAD7O15105 426 aaKnown RBP10.67□□□□□ -0.7
VEGFA-225ENST00000523950 RP2O75695 350 aa10.67□□□□□ -0.7
VEGFA-225ENST00000523950 HEXAP06865 529 aa10.67□□□□□ -0.7
VEGFA-225ENST00000523950 TACSTD2P09758 323 aa10.67□□□□□ -0.7
VEGFA-225ENST00000523950 OR2T7P0C7T2 308 aa10.67□□□□□ -0.7
VEGFA-225ENST00000523950 CCL8P80075 99 aa10.67□□□□□ -0.7
VEGFA-225ENST00000523950 TNFAIP6P98066 277 aaPredicted RBP10.67□□□□□ -0.7
VEGFA-225ENST00000523950 ZNF92Q03936 586 aa10.67□□□□□ -0.7
VEGFA-225ENST00000523950 SLC3A1Q07837 685 aa10.67□□□□□ -0.7
VEGFA-225ENST00000523950 TIGD6Q17RP2 521 aa10.67□□□□□ -0.7
VEGFA-225ENST00000523950 HFEQ30201 348 aa10.67□□□□□ -0.7
VEGFA-225ENST00000523950 GLYATL3Q5SZD4 288 aa10.67□□□□□ -0.7
VEGFA-225ENST00000523950 OGFRL1Q5TC84 451 aaPredicted RBP10.67□□□□□ -0.7
VEGFA-225ENST00000523950 LRRN1Q6UXK5 716 aa10.67□□□□□ -0.7
VEGFA-225ENST00000523950 Q6ZR03 302 aa10.67□□□□□ -0.7
VEGFA-225ENST00000523950 USP51Q70EK9 711 aa10.67□□□□□ -0.7
VEGFA-225ENST00000523950 PRSS45Q7RTY3 260 aa10.67□□□□□ -0.7
VEGFA-225ENST00000523950 ZNF679Q8IYX0 411 aa10.67□□□□□ -0.7
VEGFA-225ENST00000523950 ZNF555Q8NEP9 628 aa10.67□□□□□ -0.7
VEGFA-225ENST00000523950 OR51G2Q8NGK0 314 aa10.67□□□□□ -0.7
VEGFA-225ENST00000523950 OR2T27Q8NH04 317 aa10.67□□□□□ -0.7
VEGFA-225ENST00000523950 SPRYD4Q8WW59 207 aaPredicted RBP10.67□□□□□ -0.7
VEGFA-225ENST00000523950 GTF3AQ92664 365 aaKnown RBP10.67□□□□□ -0.7
VEGFA-225ENST00000523950 PGAM5Q96HS1 289 aa10.67□□□□□ -0.7
VEGFA-225ENST00000523950 Q96MT0 163 aa10.67□□□□□ -0.7
VEGFA-225ENST00000523950 BPESC1Q9GZL8 116 aa10.67□□□□□ -0.7
VEGFA-225ENST00000523950 TMEM100Q9NV29 134 aa10.67□□□□□ -0.7
VEGFA-225ENST00000523950 FAM118AQ9NWS6 357 aa10.67□□□□□ -0.7
VEGFA-225ENST00000523950 DNAJC27Q9NZQ0 273 aa10.67□□□□□ -0.7
VEGFA-225ENST00000523950 RAB26Q9ULW5 256 aa10.67□□□□□ -0.7
VEGFA-225ENST00000523950 LRP12Q9Y561 859 aa10.67□□□□□ -0.7
VEGFA-225ENST00000523950 HIVEP1P15822 2718 aa10.66□□□□□ -0.7
VEGFA-225ENST00000523950 GGT3PA6NGU5 568 aa10.66□□□□□ -0.7
VEGFA-225ENST00000523950 CD300LBA8K4G0 201 aa10.66□□□□□ -0.7
VEGFA-225ENST00000523950 IFNL4K9M1U5 179 aa10.66□□□□□ -0.7
VEGFA-225ENST00000523950 TBX1O43435 398 aa10.66□□□□□ -0.7
VEGFA-225ENST00000523950 DENRO43583 198 aaKnown RBP10.66□□□□□ -0.7
VEGFA-225ENST00000523950 SLC2A1P11166 492 aa10.66□□□□□ -0.7
VEGFA-225ENST00000523950 COL8A2P25067 703 aa10.66□□□□□ -0.7
VEGFA-225ENST00000523950 GPR6P46095 362 aaPredicted RBP10.66□□□□□ -0.7
VEGFA-225ENST00000523950 CHN2P52757 468 aa10.66□□□□□ -0.7
VEGFA-225ENST00000523950 RIDAP52758 137 aaKnown RBP10.66□□□□□ -0.7
VEGFA-225ENST00000523950 ZNF829Q3KNS6 432 aaPredicted RBP10.66□□□□□ -0.7
VEGFA-225ENST00000523950 ZNF322Q6U7Q0 402 aaPredicted RBP10.66□□□□□ -0.7
VEGFA-225ENST00000523950 CLEC9AQ6UXN8 241 aa10.66□□□□□ -0.7
VEGFA-225ENST00000523950 FAM57BQ71RH2 274 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms