RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 CENPMQ9NSP4 180 aa13.64□□□□□ -0.23
CLN8-206ENST00000523237 POLR3KQ9Y2Y1 108 aaPredicted RBP13.64□□□□□ -0.23
CLN8-206ENST00000523237 IGHV3-64DA0A0J9YX35 117 aa13.63□□□□□ -0.23
CLN8-206ENST00000523237 ZNF878C9JN71 531 aa13.63□□□□□ -0.23
CLN8-206ENST00000523237 F5H0A9 414 aaPredicted RBP13.63□□□□□ -0.23
CLN8-206ENST00000523237 CYB5R3P00387 301 aaPredicted RBP13.63□□□□□ -0.23
CLN8-206ENST00000523237 ADRA2CP18825 462 aa13.63□□□□□ -0.23
CLN8-206ENST00000523237 CPT2P23786 658 aa13.63□□□□□ -0.23
CLN8-206ENST00000523237 GRK5P34947 590 aa13.63□□□□□ -0.23
CLN8-206ENST00000523237 GATA4P43694 442 aa13.63□□□□□ -0.23
CLN8-206ENST00000523237 SLC15A1P46059 708 aa13.63□□□□□ -0.23
CLN8-206ENST00000523237 ZNF92Q03936 586 aa13.63□□□□□ -0.23
CLN8-206ENST00000523237 OR8G1Q15617 311 aa13.63□□□□□ -0.23
CLN8-206ENST00000523237 ESCO2Q56NI9 601 aa13.63□□□□□ -0.23
CLN8-206ENST00000523237 ERGIC1Q969X5 290 aa13.63□□□□□ -0.23
CLN8-206ENST00000523237 OTULINQ96BN8 352 aa13.63□□□□□ -0.23
CLN8-206ENST00000523237 KCNJ15Q99712 375 aa13.63□□□□□ -0.23
CLN8-206ENST00000523237 PDP1Q9P0J1 537 aaPredicted RBP13.63□□□□□ -0.23
CLN8-206ENST00000523237 LRCH1Q9Y2L9 728 aa13.63□□□□□ -0.23
CLN8-206ENST00000523237 GGT3PA6NGU5 568 aa13.62□□□□□ -0.23
CLN8-206ENST00000523237 FAM183AA6NL82 134 aa13.62□□□□□ -0.23
CLN8-206ENST00000523237 CD300LBA8K4G0 201 aa13.62□□□□□ -0.23
CLN8-206ENST00000523237 CEACAM18A8MTB9 384 aa13.62□□□□□ -0.23
CLN8-206ENST00000523237 A8MXK9 166 aa13.62□□□□□ -0.23
CLN8-206ENST00000523237 GMDSO60547 372 aa13.62□□□□□ -0.23
CLN8-206ENST00000523237 E2F6O75461 281 aa13.62□□□□□ -0.23
CLN8-206ENST00000523237 VENTXO95231 258 aa13.62□□□□□ -0.23
CLN8-206ENST00000523237 FSTL3O95633 263 aa13.62□□□□□ -0.23
CLN8-206ENST00000523237 IRF2P14316 349 aa13.62□□□□□ -0.23
CLN8-206ENST00000523237 PAICSP22234 425 aaKnown RBP13.62□□□□□ -0.23
CLN8-206ENST00000523237 CD200P41217 278 aa13.62□□□□□ -0.23
CLN8-206ENST00000523237 PRKXP51817 358 aa13.62□□□□□ -0.23
CLN8-206ENST00000523237 SEC61A1P61619 476 aaKnown RBP13.62□□□□□ -0.23
CLN8-206ENST00000523237 GRB2P62993 217 aaKnown RBP13.62□□□□□ -0.23
CLN8-206ENST00000523237 MAB21L1Q13394 359 aa13.62□□□□□ -0.23
CLN8-206ENST00000523237 FLOT2Q14254 428 aa13.62□□□□□ -0.23
CLN8-206ENST00000523237 GLYATL3Q5SZD4 288 aa13.62□□□□□ -0.23
CLN8-206ENST00000523237 LINC01590Q5TEZ4 76 aa13.62□□□□□ -0.23
CLN8-206ENST00000523237 USP43Q70EL4 1123 aa13.62□□□□□ -0.23
CLN8-206ENST00000523237 TMEM179BQ7Z7N9 219 aa13.62□□□□□ -0.23
CLN8-206ENST00000523237 SPATA24Q86W54 205 aa13.62□□□□□ -0.23
CLN8-206ENST00000523237 IQCF1Q8N6M8 205 aa13.62□□□□□ -0.23
CLN8-206ENST00000523237 SEMA6DQ8NFY4 1073 aa13.62□□□□□ -0.23
CLN8-206ENST00000523237 OR2AE1Q8NHA4 323 aa13.62□□□□□ -0.23
CLN8-206ENST00000523237 ZFAND2BQ8WV99 257 aa13.62□□□□□ -0.23
CLN8-206ENST00000523237 INTS14Q96SY0 518 aa13.62□□□□□ -0.23
CLN8-206ENST00000523237 OPA3Q9H6K4 179 aa13.62□□□□□ -0.23
CLN8-206ENST00000523237 YY1AP1Q9H869 796 aa13.62□□□□□ -0.23
CLN8-206ENST00000523237 ZNF556Q9HAH1 456 aa13.62□□□□□ -0.23
CLN8-206ENST00000523237 MMP26Q9NRE1 261 aa13.62□□□□□ -0.23
CLN8-206ENST00000523237 FAM53CQ9NYF3 392 aa13.62□□□□□ -0.23
CLN8-206ENST00000523237 OR5V1Q9UGF6 321 aa13.62□□□□□ -0.23
CLN8-206ENST00000523237 OPN4Q9UHM6 478 aa13.62□□□□□ -0.23
CLN8-206ENST00000523237 DOCK11Q5JSL3 2073 aa13.62□□□□□ -0.23
CLN8-206ENST00000523237 ZNF205O95201 554 aa13.61□□□□□ -0.23
CLN8-206ENST00000523237 WNT2P09544 360 aa13.61□□□□□ -0.23
CLN8-206ENST00000523237 RPS2P15880 293 aaKnown RBP13.61□□□□□ -0.23
CLN8-206ENST00000523237 CA6P23280 308 aa13.61□□□□□ -0.23
CLN8-206ENST00000523237 POU1F1P28069 291 aa13.61□□□□□ -0.23
CLN8-206ENST00000523237 HSD11B1P28845 292 aa13.61□□□□□ -0.23
CLN8-206ENST00000523237 EIF2B1Q14232 305 aaKnown RBP13.61□□□□□ -0.23
CLN8-206ENST00000523237 ERI1Q8IV48 349 aaKnown RBP13.61□□□□□ -0.23
CLN8-206ENST00000523237 OR11L1Q8NGX0 322 aa13.61□□□□□ -0.23
CLN8-206ENST00000523237 OR6N2Q8NGY6 317 aa13.61□□□□□ -0.23
CLN8-206ENST00000523237 Q8TCH9 128 aa13.61□□□□□ -0.23
CLN8-206ENST00000523237 JMJD8Q96S16 334 aa13.61□□□□□ -0.23
CLN8-206ENST00000523237 ADAT1Q9BUB4 502 aaKnown RBP13.61□□□□□ -0.23
CLN8-206ENST00000523237 MRI1Q9BV20 369 aa13.61□□□□□ -0.23
CLN8-206ENST00000523237 SUCNR1Q9BXA5 334 aa13.61□□□□□ -0.23
CLN8-206ENST00000523237 TOR3AQ9H497 397 aa13.61□□□□□ -0.23
CLN8-206ENST00000523237 MED20Q9H944 212 aa13.61□□□□□ -0.23
CLN8-206ENST00000523237 TMEM165Q9HC07 324 aa13.61□□□□□ -0.23
CLN8-206ENST00000523237 MIOXQ9UGB7 285 aa13.61□□□□□ -0.23
CLN8-206ENST00000523237 N6AMT1Q9Y5N5 214 aa13.61□□□□□ -0.23
CLN8-206ENST00000523237 AUP1Q9Y679 476 aa13.61□□□□□ -0.23
CLN8-206ENST00000523237 FBN3Q75N90 2809 aa13.6□□□□□ -0.23
CLN8-206ENST00000523237 PRR23D1E9PI22 279 aaPredicted RBP13.6□□□□□ -0.23
CLN8-206ENST00000523237 TRAPPC2LH3BP13 241 aa13.6□□□□□ -0.23
CLN8-206ENST00000523237 XRCC2O43543 280 aa13.6□□□□□ -0.23
CLN8-206ENST00000523237 RGS9O75916 674 aaPredicted RBP13.6□□□□□ -0.23
CLN8-206ENST00000523237 GLCEO94923 617 aa13.6□□□□□ -0.23
CLN8-206ENST00000523237 APOC1P02654 83 aa13.6□□□□□ -0.23
CLN8-206ENST00000523237 PRR23D2P0DMB1 279 aaPredicted RBP13.6□□□□□ -0.23
CLN8-206ENST00000523237 SLC2A1P11166 492 aa13.6□□□□□ -0.23
CLN8-206ENST00000523237 ZNF12P17014 697 aa13.6□□□□□ -0.23
CLN8-206ENST00000523237 GSTT1P30711 240 aa13.6□□□□□ -0.23
CLN8-206ENST00000523237 PMELP40967 661 aa13.6□□□□□ -0.23
CLN8-206ENST00000523237 HILS1P60008 231 aa13.6□□□□□ -0.23
CLN8-206ENST00000523237 GNB2P62879 340 aa13.6□□□□□ -0.23
CLN8-206ENST00000523237 CBX1P83916 185 aa13.6□□□□□ -0.23
CLN8-206ENST00000523237 ZNF154Q13106 437 aa13.6□□□□□ -0.23
CLN8-206ENST00000523237 ZNF404Q494X3 552 aa13.6□□□□□ -0.23
CLN8-206ENST00000523237 ARMCX4Q5H9R4 360 aa13.6□□□□□ -0.23
CLN8-206ENST00000523237 SPATC1Q76KD6 591 aa13.6□□□□□ -0.23
CLN8-206ENST00000523237 SHFQ7M4L6 423 aa13.6□□□□□ -0.23
CLN8-206ENST00000523237 DPY19L4Q7Z388 723 aa13.6□□□□□ -0.23
CLN8-206ENST00000523237 KLBQ86Z14 1044 aa13.6□□□□□ -0.23
CLN8-206ENST00000523237 BPIFB2Q8N4F0 458 aa13.6□□□□□ -0.23
CLN8-206ENST00000523237 DEFB108BQ8NET1 73 aa13.6□□□□□ -0.23
CLN8-206ENST00000523237 SLC7A6OSQ96CW6 309 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms