RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 SPSB4Q96A44 273 aa8.48□□□□□ -1.05
CLN8-202ENST00000517514 APOBEC3DQ96AK3 386 aaPredicted RBP8.48□□□□□ -1.05
CLN8-202ENST00000517514 MRPL37Q9BZE1 423 aaKnown RBP8.48□□□□□ -1.05
CLN8-202ENST00000517514 PBOV1Q9GZY1 135 aa8.48□□□□□ -1.05
CLN8-202ENST00000517514 ZNF442Q9H7R0 627 aa8.48□□□□□ -1.05
CLN8-202ENST00000517514 NIPAL2Q9H841 368 aa8.48□□□□□ -1.05
CLN8-202ENST00000517514 CISD1Q9NZ45 108 aaKnown RBP8.48□□□□□ -1.05
CLN8-202ENST00000517514 PTTG3PQ9NZH4 202 aa8.48□□□□□ -1.05
CLN8-202ENST00000517514 FRRS1LQ9P0K9 344 aa8.48□□□□□ -1.05
CLN8-202ENST00000517514 NUFIP1Q9UHK0 495 aaKnown RBP8.48□□□□□ -1.05
CLN8-202ENST00000517514 OR52A1Q9UKL2 312 aa8.48□□□□□ -1.05
CLN8-202ENST00000517514 AKAP6Q13023 2319 aa8.47□□□□□ -1.05
CLN8-202ENST00000517514 IGLV3-9A0A075B6K5 115 aa8.47□□□□□ -1.05
CLN8-202ENST00000517514 ACOD1A6NK06 481 aa8.47□□□□□ -1.05
CLN8-202ENST00000517514 TRIM64CA6NLI5 447 aa8.47□□□□□ -1.05
CLN8-202ENST00000517514 OR4C45A6NMZ5 311 aa8.47□□□□□ -1.05
CLN8-202ENST00000517514 OGG1O15527 345 aa8.47□□□□□ -1.05
CLN8-202ENST00000517514 ANXA2P07355 339 aaKnown RBP8.47□□□□□ -1.05
CLN8-202ENST00000517514 SOD3P08294 240 aa8.47□□□□□ -1.05
CLN8-202ENST00000517514 SLC6A9P48067 706 aa8.47□□□□□ -1.05
CLN8-202ENST00000517514 RGS6P49758 472 aa8.47□□□□□ -1.05
CLN8-202ENST00000517514 CHN2P52757 468 aa8.47□□□□□ -1.05
CLN8-202ENST00000517514 ACTA2P62736 377 aa8.47□□□□□ -1.05
CLN8-202ENST00000517514 ACTG2P63267 376 aa8.47□□□□□ -1.05
CLN8-202ENST00000517514 ZNF92Q03936 586 aa8.47□□□□□ -1.05
CLN8-202ENST00000517514 PSG7Q13046 419 aa8.47□□□□□ -1.05
CLN8-202ENST00000517514 GK2Q14410 553 aaPredicted RBP8.47□□□□□ -1.05
CLN8-202ENST00000517514 SWI5Q1ZZU3 235 aa8.47□□□□□ -1.05
CLN8-202ENST00000517514 MBNL2Q5VZF2 373 aaKnown RBP8.47□□□□□ -1.05
CLN8-202ENST00000517514 C11orf71Q6IPW1 123 aa8.47□□□□□ -1.05
CLN8-202ENST00000517514 FBXW12Q6X9E4 464 aa8.47□□□□□ -1.05
CLN8-202ENST00000517514 KLBQ86Z14 1044 aa8.47□□□□□ -1.05
CLN8-202ENST00000517514 EGFL6Q8IUX8 553 aa8.47□□□□□ -1.05
CLN8-202ENST00000517514 ELMOD2Q8IZ81 293 aa8.47□□□□□ -1.05
CLN8-202ENST00000517514 KLHL36Q8N4N3 616 aa8.47□□□□□ -1.05
CLN8-202ENST00000517514 OR10AC1Q8NH08 325 aa8.47□□□□□ -1.05
CLN8-202ENST00000517514 KLF14Q8TD94 323 aaPredicted RBP8.47□□□□□ -1.05
CLN8-202ENST00000517514 RGP1Q92546 391 aaPredicted RBP8.47□□□□□ -1.05
CLN8-202ENST00000517514 GTF3AQ92664 365 aaKnown RBP8.47□□□□□ -1.05
CLN8-202ENST00000517514 MRPL24Q96A35 216 aaKnown RBP8.47□□□□□ -1.05
CLN8-202ENST00000517514 DHRS9Q9BPW9 319 aa8.47□□□□□ -1.05
CLN8-202ENST00000517514 KCNS3Q9BQ31 491 aa8.47□□□□□ -1.05
CLN8-202ENST00000517514 REPIN1Q9BWE0 567 aaKnown RBP8.47□□□□□ -1.05
CLN8-202ENST00000517514 CLEC4MQ9H2X3 399 aaPredicted RBP8.47□□□□□ -1.05
CLN8-202ENST00000517514 ZNF696Q9H7X3 374 aa8.47□□□□□ -1.05
CLN8-202ENST00000517514 EIF3KQ9UBQ5 218 aaKnown RBP8.47□□□□□ -1.05
CLN8-202ENST00000517514 N6AMT1Q9Y5N5 214 aa8.47□□□□□ -1.05
CLN8-202ENST00000517514 POLQO75417 2590 aa8.46□□□□□ -1.05
CLN8-202ENST00000517514 hCG_38984A0A1B0GV85 526 aa8.46□□□□□ -1.06
CLN8-202ENST00000517514 LOC110117498-PIK3R3F6TDL0 507 aa8.46□□□□□ -1.06
CLN8-202ENST00000517514 J3QW42 95 aa8.46□□□□□ -1.06
CLN8-202ENST00000517514 LMX1BO60663 402 aa8.46□□□□□ -1.06
CLN8-202ENST00000517514 IGHV3-13P01766 116 aa8.46□□□□□ -1.06
CLN8-202ENST00000517514 MT-ND5P03915 603 aa8.46□□□□□ -1.06
CLN8-202ENST00000517514 LCKP06239 509 aa8.46□□□□□ -1.06
CLN8-202ENST00000517514 OR4A8P0C604 315 aa8.46□□□□□ -1.06
CLN8-202ENST00000517514 SMIM18P0DKX4 95 aa8.46□□□□□ -1.06
CLN8-202ENST00000517514 MYL12AP19105 171 aa8.46□□□□□ -1.06
CLN8-202ENST00000517514 ACKR3P25106 362 aa8.46□□□□□ -1.06
CLN8-202ENST00000517514 SSTR2P30874 369 aa8.46□□□□□ -1.06
CLN8-202ENST00000517514 APOBEC3AP31941 199 aaPredicted RBP8.46□□□□□ -1.06
CLN8-202ENST00000517514 TTKP33981 857 aa8.46□□□□□ -1.06
CLN8-202ENST00000517514 RAD52P43351 418 aa8.46□□□□□ -1.06
CLN8-202ENST00000517514 TGM4P49221 684 aa8.46□□□□□ -1.06
CLN8-202ENST00000517514 FABP6P51161 128 aa8.46□□□□□ -1.06
CLN8-202ENST00000517514 WNT4P56705 351 aa8.46□□□□□ -1.06
CLN8-202ENST00000517514 FAM3AP98173 230 aa8.46□□□□□ -1.06
CLN8-202ENST00000517514 EMX1Q04741 257 aaPredicted RBP8.46□□□□□ -1.06
CLN8-202ENST00000517514 ALKBH1Q13686 389 aaKnown RBP8.46□□□□□ -1.06
CLN8-202ENST00000517514 ZNF829Q3KNS6 432 aaPredicted RBP8.46□□□□□ -1.06
CLN8-202ENST00000517514 RGS7BPQ6MZT1 257 aaPredicted RBP8.46□□□□□ -1.06
CLN8-202ENST00000517514 ZNF773Q6PK81 442 aa8.46□□□□□ -1.06
CLN8-202ENST00000517514 Q6ZR03 302 aa8.46□□□□□ -1.06
CLN8-202ENST00000517514 DTX2Q86UW9 622 aa8.46□□□□□ -1.06
CLN8-202ENST00000517514 RDH10Q8IZV5 341 aa8.46□□□□□ -1.06
CLN8-202ENST00000517514 ZNF611Q8N823 705 aa8.46□□□□□ -1.06
CLN8-202ENST00000517514 ZFP41Q8N8Y5 198 aa8.46□□□□□ -1.06
CLN8-202ENST00000517514 PLPP7Q8NBV4 271 aa8.46□□□□□ -1.06
CLN8-202ENST00000517514 OR51E1Q8TCB6 317 aa8.46□□□□□ -1.06
CLN8-202ENST00000517514 HAVCR1Q96D42 359 aa8.46□□□□□ -1.06
CLN8-202ENST00000517514 CMBLQ96DG6 245 aa8.46□□□□□ -1.06
CLN8-202ENST00000517514 PGAM5Q96HS1 289 aa8.46□□□□□ -1.06
CLN8-202ENST00000517514 BCL2L14Q9BZR8 327 aa8.46□□□□□ -1.06
CLN8-202ENST00000517514 PPP1R3EQ9H7J1 279 aa8.46□□□□□ -1.06
CLN8-202ENST00000517514 UBTD1Q9HAC8 227 aa8.46□□□□□ -1.06
CLN8-202ENST00000517514 ACOT13Q9NPJ3 140 aa8.46□□□□□ -1.06
CLN8-202ENST00000517514 BABAM2Q9NXR7 383 aa8.46□□□□□ -1.06
CLN8-202ENST00000517514 POU2F3Q9UKI9 436 aa8.46□□□□□ -1.06
CLN8-202ENST00000517514 BLOC1S6Q9UL45 172 aa8.46□□□□□ -1.06
CLN8-202ENST00000517514 SNX5Q9Y5X3 404 aa8.46□□□□□ -1.06
CLN8-202ENST00000517514 VPS13CQ709C8 3753 aa8.46□□□□□ -1.06
CLN8-202ENST00000517514 A0A0U1RQV5 110 aa8.45□□□□□ -1.06
CLN8-202ENST00000517514 A0A1B0GWJ7 208 aa8.45□□□□□ -1.06
CLN8-202ENST00000517514 H3BSA7 217 aa8.45□□□□□ -1.06
CLN8-202ENST00000517514 P2RY10O00398 339 aa8.45□□□□□ -1.06
CLN8-202ENST00000517514 TBX1O43435 398 aa8.45□□□□□ -1.06
CLN8-202ENST00000517514 MRPS14O60783 128 aaKnown RBP8.45□□□□□ -1.06
CLN8-202ENST00000517514 ZFPL1O95159 310 aa8.45□□□□□ -1.06
CLN8-202ENST00000517514 APOC1P02654 83 aa8.45□□□□□ -1.06
CLN8-202ENST00000517514 TACSTD2P09758 323 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms