RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 OR4K5Q8NGD3 323 aa7.49□□□□□ -1.21
NUP54-211ENST00000512151 OR8B3Q8NGG8 313 aa7.49□□□□□ -1.21
NUP54-211ENST00000512151 OR1J2Q8NGS2 313 aa7.49□□□□□ -1.21
NUP54-211ENST00000512151 PFN4Q8NHR9 129 aa7.49□□□□□ -1.21
NUP54-211ENST00000512151 ZNF420Q8TAQ5 688 aaPredicted RBP7.49□□□□□ -1.21
NUP54-211ENST00000512151 SLC7A13Q8TCU3 470 aa7.49□□□□□ -1.21
NUP54-211ENST00000512151 TMEM239Q8WW34 195 aa7.49□□□□□ -1.21
NUP54-211ENST00000512151 TMEM54Q969K7 222 aa7.49□□□□□ -1.21
NUP54-211ENST00000512151 PLEKHA8Q96JA3 519 aa7.49□□□□□ -1.21
NUP54-211ENST00000512151 POM121L2Q96KW2 1035 aa7.49□□□□□ -1.21
NUP54-211ENST00000512151 WDFY2Q96P53 400 aa7.49□□□□□ -1.21
NUP54-211ENST00000512151 OR8B2Q96RD0 313 aa7.49□□□□□ -1.21
NUP54-211ENST00000512151 SIRPDQ9H106 197 aa7.49□□□□□ -1.21
NUP54-211ENST00000512151 C1orf198Q9H425 327 aa7.49□□□□□ -1.21
NUP54-211ENST00000512151 C20orf141Q9NUB4 165 aa7.49□□□□□ -1.21
NUP54-211ENST00000512151 DNAJB9Q9UBS3 223 aa7.49□□□□□ -1.21
NUP54-211ENST00000512151 SCOCQ9UIL1 159 aa7.49□□□□□ -1.21
NUP54-211ENST00000512151 RPUSD1Q9UJJ7 312 aaKnown RBP7.49□□□□□ -1.21
NUP54-211ENST00000512151 RAB26Q9ULW5 256 aa7.49□□□□□ -1.21
NUP54-211ENST00000512151 FAM32AQ9Y421 112 aaKnown RBP7.49□□□□□ -1.21
NUP54-211ENST00000512151 U3KQV3 271 aa7.49□□□□□ -1.21
NUP54-211ENST00000512151 ANKRD61A6NGH8 418 aa7.48□□□□□ -1.21
NUP54-211ENST00000512151 TNFRSF11BO00300 401 aa7.48□□□□□ -1.21
NUP54-211ENST00000512151 KPNA4O00629 521 aaPredicted RBP7.48□□□□□ -1.21
NUP54-211ENST00000512151 BGLAPP02818 100 aa7.48□□□□□ -1.21
NUP54-211ENST00000512151 NHLRC4P0CG21 123 aaPredicted RBP7.48□□□□□ -1.21
NUP54-211ENST00000512151 CPT2P23786 658 aa7.48□□□□□ -1.21
NUP54-211ENST00000512151 FASP25445 335 aa7.48□□□□□ -1.21
NUP54-211ENST00000512151 PRB3Q04118 309 aaPredicted RBP7.48□□□□□ -1.21
NUP54-211ENST00000512151 EMX1Q04741 257 aaPredicted RBP7.48□□□□□ -1.21
NUP54-211ENST00000512151 PRKCDQ05655 676 aa7.48□□□□□ -1.21
NUP54-211ENST00000512151 EGFEM1PQ0D2K5 195 aa7.48□□□□□ -1.21
NUP54-211ENST00000512151 PSG7Q13046 419 aa7.48□□□□□ -1.21
NUP54-211ENST00000512151 ATP6AP1Q15904 470 aa7.48□□□□□ -1.21
NUP54-211ENST00000512151 FGD3Q5JSP0 725 aa7.48□□□□□ -1.21
NUP54-211ENST00000512151 ZNF770Q6IQ21 691 aaPredicted RBP7.48□□□□□ -1.21
NUP54-211ENST00000512151 RNF144BQ7Z419 303 aa7.48□□□□□ -1.21
NUP54-211ENST00000512151 NDUFA11Q86Y39 141 aa7.48□□□□□ -1.21
NUP54-211ENST00000512151 ADPRHL1Q8NDY3 354 aa7.48□□□□□ -1.21
NUP54-211ENST00000512151 OR4F17Q8NGA8 305 aa7.48□□□□□ -1.21
NUP54-211ENST00000512151 ACOT11Q8WXI4 607 aaPredicted RBP7.48□□□□□ -1.21
NUP54-211ENST00000512151 MPP4Q96JB8 637 aa7.48□□□□□ -1.21
NUP54-211ENST00000512151 MAP6Q96JE9 813 aa7.48□□□□□ -1.21
NUP54-211ENST00000512151 MOGAT1Q96PD6 335 aa7.48□□□□□ -1.21
NUP54-211ENST00000512151 OR4F4Q96R69 305 aa7.48□□□□□ -1.21
NUP54-211ENST00000512151 MYCBPQ99417 103 aaPredicted RBP7.48□□□□□ -1.21
NUP54-211ENST00000512151 CITED2Q99967 270 aaPredicted RBP7.48□□□□□ -1.21
NUP54-211ENST00000512151 TMEM43Q9BTV4 400 aa7.48□□□□□ -1.21
NUP54-211ENST00000512151 POFUT1Q9H488 388 aa7.48□□□□□ -1.21
NUP54-211ENST00000512151 Q9H521 79 aa7.48□□□□□ -1.21
NUP54-211ENST00000512151 ANKRD19PQ9H560 264 aa7.48□□□□□ -1.21
NUP54-211ENST00000512151 GCM1Q9NP62 436 aa7.48□□□□□ -1.21
NUP54-211ENST00000512151 CLN8Q9UBY8 286 aa7.48□□□□□ -1.21
NUP54-211ENST00000512151 IQCMA0A1B0GVH7 501 aa7.47□□□□□ -1.21
NUP54-211ENST00000512151 ZNF726A6NNF4 738 aa7.47□□□□□ -1.21
NUP54-211ENST00000512151 GNGT2O14610 69 aa7.47□□□□□ -1.21
NUP54-211ENST00000512151 PHYHO14832 338 aa7.47□□□□□ -1.21
NUP54-211ENST00000512151 TIMM8AO60220 97 aaPredicted RBP7.47□□□□□ -1.21
NUP54-211ENST00000512151 FBXO24O75426 580 aa7.47□□□□□ -1.21
NUP54-211ENST00000512151 SERPINI2O75830 405 aa7.47□□□□□ -1.21
NUP54-211ENST00000512151 IFI30P13284 250 aa7.47□□□□□ -1.21
NUP54-211ENST00000512151 ZNF26P17031 533 aaPredicted RBP7.47□□□□□ -1.21
NUP54-211ENST00000512151 HOXB6P17509 224 aaKnown RBP7.47□□□□□ -1.21
NUP54-211ENST00000512151 TNFRSF1AP19438 455 aa7.47□□□□□ -1.21
NUP54-211ENST00000512151 PRKACGP22612 351 aa7.47□□□□□ -1.21
NUP54-211ENST00000512151 APLNRP35414 380 aa7.47□□□□□ -1.21
NUP54-211ENST00000512151 LIPAP38571 399 aa7.47□□□□□ -1.21
NUP54-211ENST00000512151 RBM34P42696 430 aaKnown RBP7.47□□□□□ -1.21
NUP54-211ENST00000512151 KIR2DS4P43632 304 aa7.47□□□□□ -1.21
NUP54-211ENST00000512151 OMPP47874 163 aa7.47□□□□□ -1.21
NUP54-211ENST00000512151 BIDP55957 195 aa7.47□□□□□ -1.21
NUP54-211ENST00000512151 PPP1CBP62140 327 aa7.47□□□□□ -1.21
NUP54-211ENST00000512151 HOXA4Q00056 320 aaPredicted RBP7.47□□□□□ -1.21
NUP54-211ENST00000512151 FHL1Q13642 323 aa7.47□□□□□ -1.21
NUP54-211ENST00000512151 MICAQ29983 383 aa7.47□□□□□ -1.21
NUP54-211ENST00000512151 ZNF404Q494X3 552 aa7.47□□□□□ -1.21
NUP54-211ENST00000512151 KLHL22Q53GT1 634 aa7.47□□□□□ -1.21
NUP54-211ENST00000512151 PABPC1L2AQ5JQF8 200 aa7.47□□□□□ -1.21
NUP54-211ENST00000512151 FAM69AQ5T7M9 428 aa7.47□□□□□ -1.21
NUP54-211ENST00000512151 MBOAT2Q6ZWT7 520 aa7.47□□□□□ -1.21
NUP54-211ENST00000512151 SLC16A14Q7RTX9 510 aa7.47□□□□□ -1.21
NUP54-211ENST00000512151 ZER1Q7Z7L7 766 aa7.47□□□□□ -1.21
NUP54-211ENST00000512151 NRMQ8IXM6 262 aa7.47□□□□□ -1.21
NUP54-211ENST00000512151 OR9Q2Q8NGE9 314 aa7.47□□□□□ -1.21
NUP54-211ENST00000512151 ABHD4Q8TB40 342 aa7.47□□□□□ -1.21
NUP54-211ENST00000512151 OR2V2Q96R30 315 aa7.47□□□□□ -1.21
NUP54-211ENST00000512151 EPYCQ99645 322 aa7.47□□□□□ -1.21
NUP54-211ENST00000512151 REEP1Q9H902 201 aa7.47□□□□□ -1.21
NUP54-211ENST00000512151 GLTPQ9NZD2 209 aa7.47□□□□□ -1.21
NUP54-211ENST00000512151 SELENONQ9NZV5 590 aa7.47□□□□□ -1.21
NUP54-211ENST00000512151 CTSZQ9UBR2 303 aa7.47□□□□□ -1.21
NUP54-211ENST00000512151 CGGBP1Q9UFW8 167 aaPredicted RBP7.47□□□□□ -1.21
NUP54-211ENST00000512151 SAMHD1Q9Y3Z3 626 aaKnown RBP7.47□□□□□ -1.21
NUP54-211ENST00000512151 CSMD3Q7Z407 3707 aa7.47□□□□□ -1.21
NUP54-211ENST00000512151 TRAV36DV7A0A075B6V5 113 aa7.46□□□□□ -1.21
NUP54-211ENST00000512151 IGHV3-64DA0A0J9YX35 117 aa7.46□□□□□ -1.21
NUP54-211ENST00000512151 C5orf49A4QMS7 147 aa7.46□□□□□ -1.21
NUP54-211ENST00000512151 DPPA5A6NC42 116 aa7.46□□□□□ -1.21
NUP54-211ENST00000512151 CDC42EP2O14613 210 aa7.46□□□□□ -1.21
NUP54-211ENST00000512151 FCN3O75636 299 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms