RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 MGMTP16455 207 aa15.9■□□□□ 0.14
CCHCR1-228ENST00000509552 TBPP20226 339 aa15.9■□□□□ 0.14
CCHCR1-228ENST00000509552 FKBP2P26885 142 aaKnown RBP15.9■□□□□ 0.14
CCHCR1-228ENST00000509552 RPS27AP62979 156 aaKnown RBP15.9■□□□□ 0.14
CCHCR1-228ENST00000509552 UBA52P62987 128 aaKnown RBP15.9■□□□□ 0.14
CCHCR1-228ENST00000509552 SRSF4Q08170 494 aaKnown RBP15.9■□□□□ 0.14
CCHCR1-228ENST00000509552 GALNT11Q8NCW6 608 aa15.9■□□□□ 0.14
CCHCR1-228ENST00000509552 OR5M9Q8NGP3 310 aa15.9■□□□□ 0.14
CCHCR1-228ENST00000509552 RASL10BQ96S79 203 aa15.9■□□□□ 0.14
CCHCR1-228ENST00000509552 ASH2LQ9UBL3 628 aa15.9■□□□□ 0.14
CCHCR1-228ENST00000509552 KCNMB2Q9Y691 235 aa15.9■□□□□ 0.14
CCHCR1-228ENST00000509552 TMEM14DPA8MWL7 114 aa15.89■□□□□ 0.13
CCHCR1-228ENST00000509552 SMAD9O15198 467 aaKnown RBP15.89■□□□□ 0.13
CCHCR1-228ENST00000509552 LIPCP11150 499 aa15.89■□□□□ 0.13
CCHCR1-228ENST00000509552 ZBTB25P24278 435 aa15.89■□□□□ 0.13
CCHCR1-228ENST00000509552 SFTPDP35247 375 aa15.89■□□□□ 0.13
CCHCR1-228ENST00000509552 HRH1P35367 487 aa15.89■□□□□ 0.13
CCHCR1-228ENST00000509552 CD96P40200 585 aa15.89■□□□□ 0.13
CCHCR1-228ENST00000509552 EIF1P41567 113 aaKnown RBP15.89■□□□□ 0.13
CCHCR1-228ENST00000509552 MFAP5Q13361 173 aa15.89■□□□□ 0.13
CCHCR1-228ENST00000509552 TMEM81Q6P7N7 255 aa15.89■□□□□ 0.13
CCHCR1-228ENST00000509552 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.89■□□□□ 0.13
CCHCR1-228ENST00000509552 CCDC74BQ96LY2 380 aa15.89■□□□□ 0.13
CCHCR1-228ENST00000509552 PHB2Q99623 299 aa15.89■□□□□ 0.13
CCHCR1-228ENST00000509552 HDGFL3Q9Y3E1 203 aa15.89■□□□□ 0.13
CCHCR1-228ENST00000509552 MYO15AQ9UKN7 3530 aa15.89■□□□□ 0.13
CCHCR1-228ENST00000509552 K7ESF4 209 aa15.89■□□□□ 0.13
CCHCR1-228ENST00000509552 TLX3O43711 291 aaPredicted RBP15.89■□□□□ 0.13
CCHCR1-228ENST00000509552 NUP62P37198 522 aaPredicted RBP15.89■□□□□ 0.13
CCHCR1-228ENST00000509552 ZNF121P58317 390 aaPredicted RBP15.89■□□□□ 0.13
CCHCR1-228ENST00000509552 IL13RA1P78552 427 aa15.89■□□□□ 0.13
CCHCR1-228ENST00000509552 FOXK1P85037 733 aa15.89■□□□□ 0.13
CCHCR1-228ENST00000509552 TMEM176BQ3YBM2 270 aaPredicted RBP15.89■□□□□ 0.13
CCHCR1-228ENST00000509552 FAHD2BQ6P2I3 314 aaPredicted RBP15.89■□□□□ 0.13
CCHCR1-228ENST00000509552 OR2W3Q7Z3T1 314 aa15.89■□□□□ 0.13
CCHCR1-228ENST00000509552 OR8B12Q8NGG6 310 aa15.89■□□□□ 0.13
CCHCR1-228ENST00000509552 FAHD2AQ96GK7 314 aa15.89■□□□□ 0.13
CCHCR1-228ENST00000509552 C1QTNF6Q9BXI9 259 aa15.89■□□□□ 0.13
CCHCR1-228ENST00000509552 CST11Q9H112 138 aa15.89■□□□□ 0.13
CCHCR1-228ENST00000509552 MRPS28Q9Y2Q9 187 aaKnown RBP15.89■□□□□ 0.13
CCHCR1-228ENST00000509552 ASCC3Q8N3C0 2202 aaKnown RBP15.89■□□□□ 0.13
CCHCR1-228ENST00000509552 A0A1B0GW55 424 aa15.88■□□□□ 0.13
CCHCR1-228ENST00000509552 KRBOX1C9JBD0 128 aa15.88■□□□□ 0.13
CCHCR1-228ENST00000509552 TP53I11O14683 189 aa15.88■□□□□ 0.13
CCHCR1-228ENST00000509552 QDPRP09417 244 aa15.88■□□□□ 0.13
CCHCR1-228ENST00000509552 DUX4L2P0CJ85 424 aa15.88■□□□□ 0.13
CCHCR1-228ENST00000509552 DUX4L3P0CJ86 424 aa15.88■□□□□ 0.13
CCHCR1-228ENST00000509552 DUX4L4P0CJ87 422 aa15.88■□□□□ 0.13
CCHCR1-228ENST00000509552 DUX4L5P0CJ88 424 aa15.88■□□□□ 0.13
CCHCR1-228ENST00000509552 DUX4L6P0CJ89 424 aa15.88■□□□□ 0.13
CCHCR1-228ENST00000509552 DUX4L7P0CJ90 424 aa15.88■□□□□ 0.13
CCHCR1-228ENST00000509552 SLC2A1P11166 492 aa15.88■□□□□ 0.13
CCHCR1-228ENST00000509552 SLC25A4P12235 298 aa15.88■□□□□ 0.13
CCHCR1-228ENST00000509552 ABOP16442 354 aa15.88■□□□□ 0.13
CCHCR1-228ENST00000509552 ADH6P28332 368 aa15.88■□□□□ 0.13
CCHCR1-228ENST00000509552 PPP1R1AQ13522 171 aa15.88■□□□□ 0.13
CCHCR1-228ENST00000509552 SLC22A6Q4U2R8 563 aa15.88■□□□□ 0.13
CCHCR1-228ENST00000509552 C11orf87Q6NUJ2 197 aa15.88■□□□□ 0.13
CCHCR1-228ENST00000509552 GLIPR1L1Q6UWM5 242 aa15.88■□□□□ 0.13
CCHCR1-228ENST00000509552 SLC38A6Q8IZM9 456 aa15.88■□□□□ 0.13
CCHCR1-228ENST00000509552 SLC26A1Q9H2B4 701 aa15.88■□□□□ 0.13
CCHCR1-228ENST00000509552 PPA2Q9H2U2 334 aa15.88■□□□□ 0.13
CCHCR1-228ENST00000509552 GPR84Q9NQS5 396 aa15.88■□□□□ 0.13
CCHCR1-228ENST00000509552 DUX4Q9UBX2 424 aa15.88■□□□□ 0.13
CCHCR1-228ENST00000509552 KANTRA0A1W2PQU2 76 aa15.88■□□□□ 0.13
CCHCR1-228ENST00000509552 C9orf170A2RU37 121 aa15.88■□□□□ 0.13
CCHCR1-228ENST00000509552 IL2RAP01589 272 aa15.88■□□□□ 0.13
CCHCR1-228ENST00000509552 CASRP41180 1078 aa15.88■□□□□ 0.13
CCHCR1-228ENST00000509552 LCN10Q6JVE6 187 aa15.88■□□□□ 0.13
CCHCR1-228ENST00000509552 KCNG3Q8TAE7 436 aa15.88■□□□□ 0.13
CCHCR1-228ENST00000509552 MITD1Q8WV92 249 aa15.88■□□□□ 0.13
CCHCR1-228ENST00000509552 CLDN23Q96B33 292 aa15.88■□□□□ 0.13
CCHCR1-228ENST00000509552 LINC00052Q96N35 136 aa15.88■□□□□ 0.13
CCHCR1-228ENST00000509552 KCNK7Q9Y2U2 307 aa15.88■□□□□ 0.13
CCHCR1-228ENST00000509552 VCANP13611 3396 aa15.87■□□□□ 0.13
CCHCR1-228ENST00000509552 AQP7P3A6NL99 342 aa15.87■□□□□ 0.13
CCHCR1-228ENST00000509552 ZNF814B7Z6K7 855 aa15.87■□□□□ 0.13
CCHCR1-228ENST00000509552 SULT2B1O00204 365 aa15.87■□□□□ 0.13
CCHCR1-228ENST00000509552 CCSO14618 274 aa15.87■□□□□ 0.13
CCHCR1-228ENST00000509552 RER1O15258 196 aa15.87■□□□□ 0.13
CCHCR1-228ENST00000509552 SIGLEC6O43699 453 aa15.87■□□□□ 0.13
CCHCR1-228ENST00000509552 OR2F2O95006 317 aa15.87■□□□□ 0.13
CCHCR1-228ENST00000509552 DCNP07585 359 aaKnown RBP15.87■□□□□ 0.13
CCHCR1-228ENST00000509552 HCKP08631 526 aa15.87■□□□□ 0.13
CCHCR1-228ENST00000509552 HLA-GP17693 338 aa15.87■□□□□ 0.13
CCHCR1-228ENST00000509552 CX3CR1P49238 355 aa15.87■□□□□ 0.13
CCHCR1-228ENST00000509552 DHPSP49366 369 aaPredicted RBP15.87■□□□□ 0.13
CCHCR1-228ENST00000509552 SLC35A1P78382 337 aa15.87■□□□□ 0.13
CCHCR1-228ENST00000509552 OR2F1Q13607 317 aa15.87■□□□□ 0.13
CCHCR1-228ENST00000509552 ZNF345Q14585 488 aa15.87■□□□□ 0.13
CCHCR1-228ENST00000509552 FAM189A2Q15884 450 aa15.87■□□□□ 0.13
CCHCR1-228ENST00000509552 KCNMB1Q16558 191 aa15.87■□□□□ 0.13
CCHCR1-228ENST00000509552 LYSMD4Q5XG99 296 aa15.87■□□□□ 0.13
CCHCR1-228ENST00000509552 KCNRGQ8N5I3 272 aa15.87■□□□□ 0.13
CCHCR1-228ENST00000509552 ZNF283Q8N7M2 679 aa15.87■□□□□ 0.13
CCHCR1-228ENST00000509552 WDSUB1Q8N9V3 476 aa15.87■□□□□ 0.13
CCHCR1-228ENST00000509552 TMEM41AQ96HV5 264 aa15.87■□□□□ 0.13
CCHCR1-228ENST00000509552 SEC22AQ96IW7 307 aa15.87■□□□□ 0.13
CCHCR1-228ENST00000509552 FAM71F1Q96KD3 344 aaPredicted RBP15.87■□□□□ 0.13
CCHCR1-228ENST00000509552 SPACA5Q96QH8 159 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms