RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 GRIP1Q9Y3R0 1128 aa7.37□□□□□ -1.23
SNCA-211ENST00000508895 LRP12Q9Y561 859 aa7.37□□□□□ -1.23
SNCA-211ENST00000508895 LOC390937A0A1W2PQ73 354 aa7.36□□□□□ -1.23
SNCA-211ENST00000508895 F5H5K5 113 aa7.36□□□□□ -1.23
SNCA-211ENST00000508895 H0YJX3 145 aa7.36□□□□□ -1.23
SNCA-211ENST00000508895 J3QRE1 110 aa7.36□□□□□ -1.23
SNCA-211ENST00000508895 J3QW42 95 aa7.36□□□□□ -1.23
SNCA-211ENST00000508895 M0R233 179 aa7.36□□□□□ -1.23
SNCA-211ENST00000508895 PSMD9O00233 223 aa7.36□□□□□ -1.23
SNCA-211ENST00000508895 MPZL2O60487 215 aa7.36□□□□□ -1.23
SNCA-211ENST00000508895 SLC2A1P11166 492 aa7.36□□□□□ -1.23
SNCA-211ENST00000508895 DBTP11182 482 aaKnown RBP7.36□□□□□ -1.23
SNCA-211ENST00000508895 SLC25A16P16260 332 aa7.36□□□□□ -1.23
SNCA-211ENST00000508895 RAD52P43351 418 aa7.36□□□□□ -1.23
SNCA-211ENST00000508895 MTNR1AP48039 350 aa7.36□□□□□ -1.23
SNCA-211ENST00000508895 CX3CR1P49238 355 aa7.36□□□□□ -1.23
SNCA-211ENST00000508895 EVX1P49640 407 aa7.36□□□□□ -1.23
SNCA-211ENST00000508895 RGS6P49758 472 aa7.36□□□□□ -1.23
SNCA-211ENST00000508895 PSMA6P60900 246 aaKnown RBP7.36□□□□□ -1.23
SNCA-211ENST00000508895 CXCR4P61073 352 aa7.36□□□□□ -1.23
SNCA-211ENST00000508895 PPP1CBP62140 327 aa7.36□□□□□ -1.23
SNCA-211ENST00000508895 GRB2P62993 217 aaKnown RBP7.36□□□□□ -1.23
SNCA-211ENST00000508895 CCL8P80075 99 aa7.36□□□□□ -1.23
SNCA-211ENST00000508895 IL5RAQ01344 420 aa7.36□□□□□ -1.23
SNCA-211ENST00000508895 POU4F2Q12837 409 aa7.36□□□□□ -1.23
SNCA-211ENST00000508895 TMED1Q13445 227 aa7.36□□□□□ -1.23
SNCA-211ENST00000508895 IL18R1Q13478 541 aa7.36□□□□□ -1.23
SNCA-211ENST00000508895 MEDAGQ5VYS4 303 aa7.36□□□□□ -1.23
SNCA-211ENST00000508895 TTC23Q5W5X9 447 aa7.36□□□□□ -1.23
SNCA-211ENST00000508895 IZUMO2Q6UXV1 221 aa7.36□□□□□ -1.23
SNCA-211ENST00000508895 PRSS45Q7RTY3 260 aa7.36□□□□□ -1.23
SNCA-211ENST00000508895 NAA40Q86UY6 237 aa7.36□□□□□ -1.23
SNCA-211ENST00000508895 SYNPRQ8TBG9 265 aa7.36□□□□□ -1.23
SNCA-211ENST00000508895 KLF14Q8TD94 323 aaPredicted RBP7.36□□□□□ -1.23
SNCA-211ENST00000508895 FBLIM1Q8WUP2 373 aa7.36□□□□□ -1.23
SNCA-211ENST00000508895 TFAP2CQ92754 450 aa7.36□□□□□ -1.23
SNCA-211ENST00000508895 RFKQ969G6 155 aa7.36□□□□□ -1.23
SNCA-211ENST00000508895 APOBEC3DQ96AK3 386 aaPredicted RBP7.36□□□□□ -1.23
SNCA-211ENST00000508895 LGALS12Q96DT0 336 aa7.36□□□□□ -1.23
SNCA-211ENST00000508895 OR8B4Q96RC9 309 aa7.36□□□□□ -1.23
SNCA-211ENST00000508895 TBX5Q99593 518 aa7.36□□□□□ -1.23
SNCA-211ENST00000508895 KCNJ15Q99712 375 aa7.36□□□□□ -1.23
SNCA-211ENST00000508895 RAB1BQ9H0U4 201 aa7.36□□□□□ -1.23
SNCA-211ENST00000508895 NARFLQ9H6Q4 476 aa7.36□□□□□ -1.23
SNCA-211ENST00000508895 ELOVL3Q9HB03 270 aa7.36□□□□□ -1.23
SNCA-211ENST00000508895 ZNF275Q9NSD4 429 aaPredicted RBP7.36□□□□□ -1.23
SNCA-211ENST00000508895 CENPMQ9NSP4 180 aa7.36□□□□□ -1.23
SNCA-211ENST00000508895 CLN6Q9NWW5 311 aa7.36□□□□□ -1.23
SNCA-211ENST00000508895 H2AFY2Q9P0M6 372 aaPredicted RBP7.36□□□□□ -1.23
SNCA-211ENST00000508895 LAMP5Q9UJQ1 280 aa7.36□□□□□ -1.23
SNCA-211ENST00000508895 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.36□□□□□ -1.23
SNCA-211ENST00000508895 STARD10Q9Y365 291 aa7.36□□□□□ -1.23
SNCA-211ENST00000508895 SPEF1Q9Y4P9 236 aa7.36□□□□□ -1.23
SNCA-211ENST00000508895 A0A1W2PPW3 197 aa7.35□□□□□ -1.23
SNCA-211ENST00000508895 A0A1W2PQL4 384 aaPredicted RBP7.35□□□□□ -1.23
SNCA-211ENST00000508895 C17orf100A8MU93 164 aa7.35□□□□□ -1.23
SNCA-211ENST00000508895 FAM157AC9JC47 383 aa7.35□□□□□ -1.23
SNCA-211ENST00000508895 H3BSA7 217 aa7.35□□□□□ -1.23
SNCA-211ENST00000508895 MAGEB4O15481 346 aaPredicted RBP7.35□□□□□ -1.23
SNCA-211ENST00000508895 CDC14BO60729 498 aa7.35□□□□□ -1.23
SNCA-211ENST00000508895 IGHV1-46P01743 117 aa7.35□□□□□ -1.23
SNCA-211ENST00000508895 IGHV3-13P01766 116 aa7.35□□□□□ -1.23
SNCA-211ENST00000508895 TACSTD2P09758 323 aa7.35□□□□□ -1.23
SNCA-211ENST00000508895 HSD11B1P28845 292 aa7.35□□□□□ -1.23
SNCA-211ENST00000508895 SLC6A9P48067 706 aa7.35□□□□□ -1.23
SNCA-211ENST00000508895 PRKXP51817 358 aa7.35□□□□□ -1.23
SNCA-211ENST00000508895 TPTEP56180 551 aa7.35□□□□□ -1.23
SNCA-211ENST00000508895 KLF3P57682 345 aaPredicted RBP7.35□□□□□ -1.23
SNCA-211ENST00000508895 ZNF121P58317 390 aaPredicted RBP7.35□□□□□ -1.23
SNCA-211ENST00000508895 DSCR9P59020 149 aa7.35□□□□□ -1.23
SNCA-211ENST00000508895 HOXA4Q00056 320 aaPredicted RBP7.35□□□□□ -1.23
SNCA-211ENST00000508895 ROM1Q03395 351 aa7.35□□□□□ -1.23
SNCA-211ENST00000508895 ZNF85Q03923 595 aa7.35□□□□□ -1.23
SNCA-211ENST00000508895 MFGE8Q08431 387 aaPredicted RBP7.35□□□□□ -1.23
SNCA-211ENST00000508895 PSG7Q13046 419 aa7.35□□□□□ -1.23
SNCA-211ENST00000508895 HLXQ14774 488 aaPredicted RBP7.35□□□□□ -1.23
SNCA-211ENST00000508895 TSTQ16762 297 aaKnown RBP7.35□□□□□ -1.23
SNCA-211ENST00000508895 MBNL2Q5VZF2 373 aaKnown RBP7.35□□□□□ -1.23
SNCA-211ENST00000508895 ZNF322Q6U7Q0 402 aaPredicted RBP7.35□□□□□ -1.23
SNCA-211ENST00000508895 DRAM2Q6UX65 266 aa7.35□□□□□ -1.23
SNCA-211ENST00000508895 FBXW12Q6X9E4 464 aa7.35□□□□□ -1.23
SNCA-211ENST00000508895 PLEKHG7Q6ZR37 379 aa7.35□□□□□ -1.23
SNCA-211ENST00000508895 RHOUQ7L0Q8 258 aa7.35□□□□□ -1.23
SNCA-211ENST00000508895 C8orf59Q8N0T1 100 aaPredicted RBP7.35□□□□□ -1.23
SNCA-211ENST00000508895 ZNF283Q8N7M2 679 aa7.35□□□□□ -1.23
SNCA-211ENST00000508895 SETD9Q8NE22 299 aa7.35□□□□□ -1.23
SNCA-211ENST00000508895 OR10H4Q8NGA5 316 aa7.35□□□□□ -1.23
SNCA-211ENST00000508895 OR2AE1Q8NHA4 323 aa7.35□□□□□ -1.23
SNCA-211ENST00000508895 CLDND2Q8NHS1 167 aa7.35□□□□□ -1.23
SNCA-211ENST00000508895 THEM6Q8WUY1 208 aa7.35□□□□□ -1.23
SNCA-211ENST00000508895 NEU4Q8WWR8 484 aaPredicted RBP7.35□□□□□ -1.23
SNCA-211ENST00000508895 SPTSSAQ969W0 71 aa7.35□□□□□ -1.23
SNCA-211ENST00000508895 RNFT2Q96EX2 444 aa7.35□□□□□ -1.23
SNCA-211ENST00000508895 MNTQ99583 582 aa7.35□□□□□ -1.23
SNCA-211ENST00000508895 PIMREGQ9BSJ6 248 aa7.35□□□□□ -1.23
SNCA-211ENST00000508895 VCX3BQ9H321 246 aa7.35□□□□□ -1.23
SNCA-211ENST00000508895 MSL2Q9HCI7 577 aa7.35□□□□□ -1.23
SNCA-211ENST00000508895 AMBNQ9NP70 447 aa7.35□□□□□ -1.23
SNCA-211ENST00000508895 SLCO1C1Q9NYB5 712 aa7.35□□□□□ -1.23
SNCA-211ENST00000508895 PTTG3PQ9NZH4 202 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms