RNA–Protein interactions for RNA: ENST00000508343.1

TRIO-211, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 776 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-211ENST00000508343 A0A1B0GWJ7 208 aa12.74□□□□□ -0.37
TRIO-211ENST00000508343 SAC3D1A6NKF1 404 aa12.74□□□□□ -0.37
TRIO-211ENST00000508343 H3BNX3 289 aa12.74□□□□□ -0.37
TRIO-211ENST00000508343 H2BFMP0C1H6 154 aa12.74□□□□□ -0.37
TRIO-211ENST00000508343 SLC2A1P11166 492 aa12.74□□□□□ -0.37
TRIO-211ENST00000508343 OPRL1P41146 370 aa12.74□□□□□ -0.37
TRIO-211ENST00000508343 NAA10P41227 235 aaPredicted RBP12.74□□□□□ -0.37
TRIO-211ENST00000508343 CX3CR1P49238 355 aa12.74□□□□□ -0.37
TRIO-211ENST00000508343 CDH15P55291 814 aa12.74□□□□□ -0.37
TRIO-211ENST00000508343 LMO4P61968 165 aa12.74□□□□□ -0.37
TRIO-211ENST00000508343 EFNB1P98172 346 aa12.74□□□□□ -0.37
TRIO-211ENST00000508343 GLYATL3Q5SZD4 288 aa12.74□□□□□ -0.37
TRIO-211ENST00000508343 C12orf73Q69YU5 71 aa12.74□□□□□ -0.37
TRIO-211ENST00000508343 SLC16A9Q7RTY1 509 aa12.74□□□□□ -0.37
TRIO-211ENST00000508343 PEG10Q86TG7 708 aaKnown RBP12.74□□□□□ -0.37
TRIO-211ENST00000508343 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.74□□□□□ -0.37
TRIO-211ENST00000508343 TCEANCQ8N8B7 351 aa12.74□□□□□ -0.37
TRIO-211ENST00000508343 OR2AE1Q8NHA4 323 aa12.74□□□□□ -0.37
TRIO-211ENST00000508343 SPRYD4Q8WW59 207 aaPredicted RBP12.74□□□□□ -0.37
TRIO-211ENST00000508343 ITLN1Q8WWA0 313 aa12.74□□□□□ -0.37
TRIO-211ENST00000508343 RAB3IPQ96QF0 476 aaPredicted RBP12.74□□□□□ -0.37
TRIO-211ENST00000508343 RBM4BQ9BQ04 359 aaKnown RBP12.74□□□□□ -0.37
TRIO-211ENST00000508343 YIPF3Q9GZM5 350 aa12.74□□□□□ -0.37
TRIO-211ENST00000508343 H2AFY2Q9P0M6 372 aaPredicted RBP12.74□□□□□ -0.37
TRIO-211ENST00000508343 PPP1R3CQ9UQK1 317 aa12.74□□□□□ -0.37
TRIO-211ENST00000508343 C5orf63A6NC05 138 aa12.73□□□□□ -0.37
TRIO-211ENST00000508343 CCDC182A6NF36 153 aa12.73□□□□□ -0.37
TRIO-211ENST00000508343 CD300LBA8K4G0 201 aa12.73□□□□□ -0.37
TRIO-211ENST00000508343 B4DSR2 109 aa12.73□□□□□ -0.37
TRIO-211ENST00000508343 H0YL77 283 aa12.73□□□□□ -0.37
TRIO-211ENST00000508343 XRCC2O43543 280 aa12.73□□□□□ -0.37
TRIO-211ENST00000508343 ANXA2P07355 339 aaKnown RBP12.73□□□□□ -0.37
TRIO-211ENST00000508343 ANOS1P23352 680 aa12.73□□□□□ -0.37
TRIO-211ENST00000508343 SRP9P49458 86 aaKnown RBP12.73□□□□□ -0.37
TRIO-211ENST00000508343 PRSS12P56730 875 aa12.73□□□□□ -0.37
TRIO-211ENST00000508343 CHRFAM7AQ494W8 412 aa12.73□□□□□ -0.37
TRIO-211ENST00000508343 LCN1P1Q5VSP4 162 aa12.73□□□□□ -0.37
TRIO-211ENST00000508343 MEPCEQ7L2J0 689 aaKnown RBP12.73□□□□□ -0.37
TRIO-211ENST00000508343 OR10AD1Q8NGE0 317 aa12.73□□□□□ -0.37
TRIO-211ENST00000508343 TMEM163Q8TC26 289 aa12.73□□□□□ -0.37
TRIO-211ENST00000508343 MEGF10Q96KG7 1140 aa12.73□□□□□ -0.37
TRIO-211ENST00000508343 SLC22A4Q9H015 551 aa12.73□□□□□ -0.37
TRIO-211ENST00000508343 OPA3Q9H6K4 179 aa12.73□□□□□ -0.37
TRIO-211ENST00000508343 TMEM106BQ9NUM4 274 aa12.73□□□□□ -0.37
TRIO-211ENST00000508343 LAMP5Q9UJQ1 280 aa12.73□□□□□ -0.37
TRIO-211ENST00000508343 CDC42EP3Q9UKI2 254 aa12.73□□□□□ -0.37
TRIO-211ENST00000508343 ABCA2Q9BZC7 2435 aa12.72□□□□□ -0.37
TRIO-211ENST00000508343 GGT3PA6NGU5 568 aa12.72□□□□□ -0.37
TRIO-211ENST00000508343 F5H5P2 479 aa12.72□□□□□ -0.37
TRIO-211ENST00000508343 IFNL4K9M1U5 179 aa12.72□□□□□ -0.37
TRIO-211ENST00000508343 MLNRO43193 412 aa12.72□□□□□ -0.37
TRIO-211ENST00000508343 TBX1O43435 398 aa12.72□□□□□ -0.37
TRIO-211ENST00000508343 HLA-DPB1P04440 258 aa12.72□□□□□ -0.37
TRIO-211ENST00000508343 ALOX5APP20292 161 aa12.72□□□□□ -0.37
TRIO-211ENST00000508343 POLR2IP36954 125 aaKnown RBP12.72□□□□□ -0.37
TRIO-211ENST00000508343 HCCSP53701 268 aa12.72□□□□□ -0.37
TRIO-211ENST00000508343 ZNF121P58317 390 aaPredicted RBP12.72□□□□□ -0.37
TRIO-211ENST00000508343 AADACL4Q5VUY2 407 aa12.72□□□□□ -0.37
TRIO-211ENST00000508343 PRSS45Q7RTY3 260 aa12.72□□□□□ -0.37
TRIO-211ENST00000508343 OR52H1Q8NGJ2 320 aa12.72□□□□□ -0.37
TRIO-211ENST00000508343 SPSB4Q96A44 273 aa12.72□□□□□ -0.37
TRIO-211ENST00000508343 SGK3Q96BR1 496 aa12.72□□□□□ -0.37
TRIO-211ENST00000508343 IL4I1Q96RQ9 567 aa12.72□□□□□ -0.37
TRIO-211ENST00000508343 BEX2Q9BXY8 128 aa12.72□□□□□ -0.37
TRIO-211ENST00000508343 GABARAPL3Q9BY60 117 aa12.72□□□□□ -0.37
TRIO-211ENST00000508343 SHARPINQ9H0F6 387 aa12.72□□□□□ -0.37
TRIO-211ENST00000508343 RIBC2Q9H4K1 309 aa12.72□□□□□ -0.37
TRIO-211ENST00000508343 ZNF665Q9H7R5 613 aa12.72□□□□□ -0.37
TRIO-211ENST00000508343 GCM1Q9NP62 436 aa12.72□□□□□ -0.37
TRIO-211ENST00000508343 DNAJC27Q9NZQ0 273 aa12.72□□□□□ -0.37
TRIO-211ENST00000508343 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.72□□□□□ -0.37
TRIO-211ENST00000508343 LPAR3Q9UBY5 353 aa12.72□□□□□ -0.37
TRIO-211ENST00000508343 NOP16Q9Y3C1 178 aaKnown RBP12.72□□□□□ -0.37
TRIO-211ENST00000508343 NPTNQ9Y639 398 aa12.72□□□□□ -0.37
TRIO-211ENST00000508343 DYSFO75923 2080 aa12.71□□□□□ -0.37
TRIO-211ENST00000508343 SLC22A31A6NKX4 558 aa12.71□□□□□ -0.37
TRIO-211ENST00000508343 FAM157AC9JC47 383 aa12.71□□□□□ -0.37
TRIO-211ENST00000508343 M0R129 80 aa12.71□□□□□ -0.37
TRIO-211ENST00000508343 ANPEPP15144 967 aa12.71□□□□□ -0.37
TRIO-211ENST00000508343 DDOSTP39656 456 aa12.71□□□□□ -0.37
TRIO-211ENST00000508343 RAD23AP54725 363 aa12.71□□□□□ -0.37
TRIO-211ENST00000508343 DVL1P1P54792 670 aaPredicted RBP12.71□□□□□ -0.37
TRIO-211ENST00000508343 TIGD6Q17RP2 521 aa12.71□□□□□ -0.37
TRIO-211ENST00000508343 NXNL2Q5VZ03 156 aa12.71□□□□□ -0.37
TRIO-211ENST00000508343 KCTD18Q6PI47 426 aaPredicted RBP12.71□□□□□ -0.37
TRIO-211ENST00000508343 FAM57BQ71RH2 274 aa12.71□□□□□ -0.37
TRIO-211ENST00000508343 BCDIN3DQ7Z5W3 292 aaKnown RBP12.71□□□□□ -0.37
TRIO-211ENST00000508343 RAB39BQ96DA2 213 aa12.71□□□□□ -0.37
TRIO-211ENST00000508343 OR10A2Q9H208 303 aa12.71□□□□□ -0.37
TRIO-211ENST00000508343 NIPAL2Q9H841 368 aa12.71□□□□□ -0.37
TRIO-211ENST00000508343 DCAF16Q9NXF7 216 aa12.71□□□□□ -0.37
TRIO-211ENST00000508343 MRPL15Q9P015 296 aaKnown RBP12.71□□□□□ -0.37
TRIO-211ENST00000508343 KLHDC2Q9Y2U9 406 aa12.71□□□□□ -0.37
TRIO-211ENST00000508343 TMEM14AQ9Y6G1 99 aa12.71□□□□□ -0.37
TRIO-211ENST00000508343 ISPDA4D126 451 aa12.7□□□□□ -0.38
TRIO-211ENST00000508343 TMEM178BH3BS89 294 aa12.7□□□□□ -0.38
TRIO-211ENST00000508343 GMDSO60547 372 aa12.7□□□□□ -0.38
TRIO-211ENST00000508343 ALPLP05186 524 aa12.7□□□□□ -0.38
TRIO-211ENST00000508343 MRPL3P09001 348 aaKnown RBP12.7□□□□□ -0.38
TRIO-211ENST00000508343 SBK2P0C263 348 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms