RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 SLC2A1P11166 492 aa13.59□□□□□ -0.23
SCLT1-204ENST00000503215 CA6P23280 308 aa13.59□□□□□ -0.23
SCLT1-204ENST00000503215 TPTEP56180 551 aa13.59□□□□□ -0.23
SCLT1-204ENST00000503215 PAX8Q06710 450 aa13.59□□□□□ -0.23
SCLT1-204ENST00000503215 ESCO2Q56NI9 601 aa13.59□□□□□ -0.23
SCLT1-204ENST00000503215 GLYATL3Q5SZD4 288 aa13.59□□□□□ -0.23
SCLT1-204ENST00000503215 LCN8Q6JVE9 175 aa13.59□□□□□ -0.23
SCLT1-204ENST00000503215 LYPD2Q6UXB3 125 aa13.59□□□□□ -0.23
SCLT1-204ENST00000503215 PGAP1Q75T13 922 aa13.59□□□□□ -0.23
SCLT1-204ENST00000503215 SPATC1Q76KD6 591 aa13.59□□□□□ -0.23
SCLT1-204ENST00000503215 DCXRQ7Z4W1 244 aa13.59□□□□□ -0.23
SCLT1-204ENST00000503215 DHFR2Q86XF0 187 aa13.59□□□□□ -0.23
SCLT1-204ENST00000503215 KLBQ86Z14 1044 aa13.59□□□□□ -0.23
SCLT1-204ENST00000503215 SIGLECL1Q8N7X8 197 aa13.59□□□□□ -0.23
SCLT1-204ENST00000503215 OR2T4Q8NH00 348 aa13.59□□□□□ -0.23
SCLT1-204ENST00000503215 DUX5Q96PT3 197 aa13.59□□□□□ -0.23
SCLT1-204ENST00000503215 SUCNR1Q9BXA5 334 aa13.59□□□□□ -0.23
SCLT1-204ENST00000503215 NMNAT2Q9BZQ4 307 aa13.59□□□□□ -0.23
SCLT1-204ENST00000503215 DDX28Q9NUL7 540 aaKnown RBP13.59□□□□□ -0.23
SCLT1-204ENST00000503215 TBC1D23Q9NUY8 699 aa13.59□□□□□ -0.23
SCLT1-204ENST00000503215 KCNG2Q9UJ96 466 aa13.59□□□□□ -0.23
SCLT1-204ENST00000503215 SAMHD1Q9Y3Z3 626 aaKnown RBP13.59□□□□□ -0.23
SCLT1-204ENST00000503215 PPIAL4AQ9Y536 164 aa13.59□□□□□ -0.23
SCLT1-204ENST00000503215 N6AMT1Q9Y5N5 214 aa13.59□□□□□ -0.23
SCLT1-204ENST00000503215 COMMD3-BMI1R4GMX3 469 aa13.59□□□□□ -0.23
SCLT1-204ENST00000503215 TMEM89A2RUT3 159 aa13.58□□□□□ -0.23
SCLT1-204ENST00000503215 TRIM77I1YAP6 450 aa13.58□□□□□ -0.23
SCLT1-204ENST00000503215 ZNF593O00488 134 aaPredicted RBP13.58□□□□□ -0.23
SCLT1-204ENST00000503215 FAM20BO75063 409 aa13.58□□□□□ -0.23
SCLT1-204ENST00000503215 SPARCP09486 303 aa13.58□□□□□ -0.23
SCLT1-204ENST00000503215 RPS2P15880 293 aaKnown RBP13.58□□□□□ -0.23
SCLT1-204ENST00000503215 PRKXP51817 358 aa13.58□□□□□ -0.23
SCLT1-204ENST00000503215 RAD23AP54725 363 aa13.58□□□□□ -0.23
SCLT1-204ENST00000503215 MALLQ13021 153 aa13.58□□□□□ -0.23
SCLT1-204ENST00000503215 TRIM25Q14258 630 aaKnown RBP13.58□□□□□ -0.23
SCLT1-204ENST00000503215 MICAQ29983 383 aa13.58□□□□□ -0.23
SCLT1-204ENST00000503215 OR2T5Q6IEZ7 315 aa13.58□□□□□ -0.23
SCLT1-204ENST00000503215 RPL13AP3Q6NVV1 102 aa13.58□□□□□ -0.23
SCLT1-204ENST00000503215 MRPL21Q7Z2W9 205 aaKnown RBP13.58□□□□□ -0.23
SCLT1-204ENST00000503215 MUC20Q8N307 709 aaPredicted RBP13.58□□□□□ -0.23
SCLT1-204ENST00000503215 OR2T29Q8NH02 315 aa13.58□□□□□ -0.23
SCLT1-204ENST00000503215 SPRYD4Q8WW59 207 aaPredicted RBP13.58□□□□□ -0.23
SCLT1-204ENST00000503215 GCDHQ92947 438 aaPredicted RBP13.58□□□□□ -0.23
SCLT1-204ENST00000503215 POP5Q969H6 163 aaKnown RBP13.58□□□□□ -0.23
SCLT1-204ENST00000503215 DACT3Q96B18 629 aaPredicted RBP13.58□□□□□ -0.23
SCLT1-204ENST00000503215 ZNF48Q96MX3 618 aaPredicted RBP13.58□□□□□ -0.23
SCLT1-204ENST00000503215 NIPSNAP1Q9BPW8 284 aa13.58□□□□□ -0.23
SCLT1-204ENST00000503215 SSBP3Q9BWW4 388 aaPredicted RBP13.58□□□□□ -0.23
SCLT1-204ENST00000503215 MAGIXQ9H6Y5 334 aa13.58□□□□□ -0.23
SCLT1-204ENST00000503215 MED20Q9H944 212 aa13.58□□□□□ -0.23
SCLT1-204ENST00000503215 CENPMQ9NSP4 180 aa13.58□□□□□ -0.23
SCLT1-204ENST00000503215 IFNL4K9M1U5 179 aa13.58□□□□□ -0.24
SCLT1-204ENST00000503215 ATP5HO75947 161 aa13.58□□□□□ -0.24
SCLT1-204ENST00000503215 IGHV4-38-2P0DP08 117 aa13.58□□□□□ -0.24
SCLT1-204ENST00000503215 SPI1P17947 270 aa13.58□□□□□ -0.24
SCLT1-204ENST00000503215 FPR2P25090 351 aa13.58□□□□□ -0.24
SCLT1-204ENST00000503215 OTX1P32242 354 aaPredicted RBP13.58□□□□□ -0.24
SCLT1-204ENST00000503215 CD200P41217 278 aa13.58□□□□□ -0.24
SCLT1-204ENST00000503215 GATA4P43694 442 aa13.58□□□□□ -0.24
SCLT1-204ENST00000503215 UBA52P62987 128 aaKnown RBP13.58□□□□□ -0.24
SCLT1-204ENST00000503215 PCK2Q16822 640 aa13.58□□□□□ -0.24
SCLT1-204ENST00000503215 ZNF181Q2M3W8 571 aa13.58□□□□□ -0.24
SCLT1-204ENST00000503215 ZNF404Q494X3 552 aa13.58□□□□□ -0.24
SCLT1-204ENST00000503215 ARMCX4Q5H9R4 360 aa13.58□□□□□ -0.24
SCLT1-204ENST00000503215 LINC01590Q5TEZ4 76 aa13.58□□□□□ -0.24
SCLT1-204ENST00000503215 TRPM8Q7Z2W7 1104 aa13.58□□□□□ -0.24
SCLT1-204ENST00000503215 LINC00471Q8N535 108 aa13.58□□□□□ -0.24
SCLT1-204ENST00000503215 IQCF1Q8N6M8 205 aa13.58□□□□□ -0.24
SCLT1-204ENST00000503215 SPTSSAQ969W0 71 aa13.58□□□□□ -0.24
SCLT1-204ENST00000503215 C1orf147Q96MC9 270 aaPredicted RBP13.58□□□□□ -0.24
SCLT1-204ENST00000503215 DGCR6LQ9BY27 220 aa13.58□□□□□ -0.24
SCLT1-204ENST00000503215 OR5V1Q9UGF6 321 aa13.58□□□□□ -0.24
SCLT1-204ENST00000503215 NUP50Q9UKX7 468 aa13.58□□□□□ -0.24
SCLT1-204ENST00000503215 DOCK11Q5JSL3 2073 aa13.57□□□□□ -0.24
SCLT1-204ENST00000503215 FAM183AA6NL82 134 aa13.57□□□□□ -0.24
SCLT1-204ENST00000503215 FMO3P31513 532 aa13.57□□□□□ -0.24
SCLT1-204ENST00000503215 COMPP49747 757 aaPredicted RBP13.57□□□□□ -0.24
SCLT1-204ENST00000503215 ENTPD1P49961 510 aa13.57□□□□□ -0.24
SCLT1-204ENST00000503215 SLC25A1P53007 311 aa13.57□□□□□ -0.24
SCLT1-204ENST00000503215 OR8G1Q15617 311 aa13.57□□□□□ -0.24
SCLT1-204ENST00000503215 TMEM179BQ7Z7N9 219 aa13.57□□□□□ -0.24
SCLT1-204ENST00000503215 Q8TCH9 128 aa13.57□□□□□ -0.24
SCLT1-204ENST00000503215 TAF15Q92804 592 aaKnown RBP eCLIP13.57□□□□□ -0.24
SCLT1-204ENST00000503215 CCDC124Q96CT7 223 aaKnown RBP13.57□□□□□ -0.24
SCLT1-204ENST00000503215 SLAMF6Q96DU3 332 aa13.57□□□□□ -0.24
SCLT1-204ENST00000503215 JMJD8Q96S16 334 aa13.57□□□□□ -0.24
SCLT1-204ENST00000503215 COPS4Q9BT78 406 aa13.57□□□□□ -0.24
SCLT1-204ENST00000503215 MRI1Q9BV20 369 aa13.57□□□□□ -0.24
SCLT1-204ENST00000503215 REEP1Q9H902 201 aa13.57□□□□□ -0.24
SCLT1-204ENST00000503215 MIOXQ9UGB7 285 aa13.57□□□□□ -0.24
SCLT1-204ENST00000503215 LRCH1Q9Y2L9 728 aa13.57□□□□□ -0.24
SCLT1-204ENST00000503215 GGT3PA6NGU5 568 aa13.56□□□□□ -0.24
SCLT1-204ENST00000503215 LRRC30A6NM36 301 aa13.56□□□□□ -0.24
SCLT1-204ENST00000503215 ACOT8O14734 319 aa13.56□□□□□ -0.24
SCLT1-204ENST00000503215 GNB2P62879 340 aa13.56□□□□□ -0.24
SCLT1-204ENST00000503215 FAM98BQ52LJ0 330 aaKnown RBP13.56□□□□□ -0.24
SCLT1-204ENST00000503215 SFRP4Q6FHJ7 346 aaPredicted RBP13.56□□□□□ -0.24
SCLT1-204ENST00000503215 DRAM2Q6UX65 266 aa13.56□□□□□ -0.24
SCLT1-204ENST00000503215 ZNF841Q6ZN19 808 aa13.56□□□□□ -0.24
SCLT1-204ENST00000503215 ZNF826PQ6ZT77 177 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms