RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 FAM120BQ96EK7 910 aaKnown RBP3.41□□□□□ -1.86
CSTF1-207ENST00000498689 LRGUKQ96M69 825 aa3.41□□□□□ -1.86
CSTF1-207ENST00000498689 GAFA1Q96PS6 74 aa3.41□□□□□ -1.86
CSTF1-207ENST00000498689 EPYCQ99645 322 aa3.41□□□□□ -1.86
CSTF1-207ENST00000498689 MFFQ9GZY8 342 aa3.41□□□□□ -1.86
CSTF1-207ENST00000498689 NOL11Q9H8H0 719 aaKnown RBP3.41□□□□□ -1.86
CSTF1-207ENST00000498689 WDR76Q9H967 626 aa3.41□□□□□ -1.86
CSTF1-207ENST00000498689 SNTG1Q9NSN8 517 aa3.41□□□□□ -1.86
CSTF1-207ENST00000498689 GLTPQ9NZD2 209 aa3.41□□□□□ -1.86
CSTF1-207ENST00000498689 SLC25A10Q9UBX3 287 aaPredicted RBP3.41□□□□□ -1.86
CSTF1-207ENST00000498689 ZNF391Q9UJN7 358 aa3.41□□□□□ -1.86
CSTF1-207ENST00000498689 NDUFAF1Q9Y375 327 aa3.41□□□□□ -1.86
CSTF1-207ENST00000498689 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.41□□□□□ -1.86
CSTF1-207ENST00000498689 A8MVM7 634 aa3.4□□□□□ -1.87
CSTF1-207ENST00000498689 LINC01619G3V211 115 aa3.4□□□□□ -1.87
CSTF1-207ENST00000498689 IFI6P09912 130 aa3.4□□□□□ -1.87
CSTF1-207ENST00000498689 GRPRP30550 384 aa3.4□□□□□ -1.87
CSTF1-207ENST00000498689 BIDP55957 195 aa3.4□□□□□ -1.87
CSTF1-207ENST00000498689 KRTAP10-4P60372 401 aaPredicted RBP3.4□□□□□ -1.87
CSTF1-207ENST00000498689 GMFBP60983 142 aa3.4□□□□□ -1.87
CSTF1-207ENST00000498689 ZBED6P86452 979 aa3.4□□□□□ -1.87
CSTF1-207ENST00000498689 CLCQ05315 142 aa3.4□□□□□ -1.87
CSTF1-207ENST00000498689 MGAT5Q09328 741 aa3.4□□□□□ -1.87
CSTF1-207ENST00000498689 DYNC1I2Q13409 638 aaKnown RBP3.4□□□□□ -1.87
CSTF1-207ENST00000498689 RNASEH2BQ5TBB1 312 aaKnown RBP3.4□□□□□ -1.87
CSTF1-207ENST00000498689 ZCCHC12Q6PEW1 402 aa3.4□□□□□ -1.87
CSTF1-207ENST00000498689 SLC36A1Q7Z2H8 476 aa3.4□□□□□ -1.87
CSTF1-207ENST00000498689 SNX32Q86XE0 403 aa3.4□□□□□ -1.87
CSTF1-207ENST00000498689 UBE2DNLQ8IWF7 75 aa3.4□□□□□ -1.87
CSTF1-207ENST00000498689 C5orf56Q8N8D9 126 aa3.4□□□□□ -1.87
CSTF1-207ENST00000498689 CCDC89Q8N998 374 aa3.4□□□□□ -1.87
CSTF1-207ENST00000498689 MFSD8Q8NHS3 518 aa3.4□□□□□ -1.87
CSTF1-207ENST00000498689 BBS10Q8TAM1 723 aa3.4□□□□□ -1.87
CSTF1-207ENST00000498689 DCAKDQ8WVC6 231 aa3.4□□□□□ -1.87
CSTF1-207ENST00000498689 ACOT11Q8WXI4 607 aaPredicted RBP3.4□□□□□ -1.87
CSTF1-207ENST00000498689 STMN2Q93045 179 aa3.4□□□□□ -1.87
CSTF1-207ENST00000498689 PTP4A1Q93096 173 aa3.4□□□□□ -1.87
CSTF1-207ENST00000498689 TAAR8Q969N4 342 aa3.4□□□□□ -1.87
CSTF1-207ENST00000498689 ERGIC1Q969X5 290 aa3.4□□□□□ -1.87
CSTF1-207ENST00000498689 ZBTB9Q96C00 473 aa3.4□□□□□ -1.87
CSTF1-207ENST00000498689 ZNF582Q96NG8 517 aaPredicted RBP3.4□□□□□ -1.87
CSTF1-207ENST00000498689 GGTLC1Q9BX51 225 aa3.4□□□□□ -1.87
CSTF1-207ENST00000498689 OR2H1Q9GZK4 316 aa3.4□□□□□ -1.87
CSTF1-207ENST00000498689 OR51J1Q9H342 316 aa3.4□□□□□ -1.87
CSTF1-207ENST00000498689 TBC1D23Q9NUY8 699 aa3.4□□□□□ -1.87
CSTF1-207ENST00000498689 TMEM100Q9NV29 134 aa3.4□□□□□ -1.87
CSTF1-207ENST00000498689 TAS2R7Q9NYW3 318 aa3.4□□□□□ -1.87
CSTF1-207ENST00000498689 NUDT4Q9NZJ9 180 aa3.4□□□□□ -1.87
CSTF1-207ENST00000498689 HHLA2Q9UM44 414 aa3.4□□□□□ -1.87
CSTF1-207ENST00000498689 MOB4Q9Y3A3 225 aa3.4□□□□□ -1.87
CSTF1-207ENST00000498689 HSPE1-MOB4S4R3N1 261 aa3.4□□□□□ -1.87
CSTF1-207ENST00000498689 LOC102725191A0A1B0GVB3 256 aa3.39□□□□□ -1.87
CSTF1-207ENST00000498689 hCG_1807616A0A1W2PRN6 198 aa3.39□□□□□ -1.87
CSTF1-207ENST00000498689 MAGEB16A2A368 324 aa3.39□□□□□ -1.87
CSTF1-207ENST00000498689 ZNF726A6NNF4 738 aa3.39□□□□□ -1.87
CSTF1-207ENST00000498689 ZNF785A8K8V0 405 aa3.39□□□□□ -1.87
CSTF1-207ENST00000498689 IQCF6A8MYZ5 107 aa3.39□□□□□ -1.87
CSTF1-207ENST00000498689 GOLGA6L6A8MZA4 724 aa3.39□□□□□ -1.87
CSTF1-207ENST00000498689 TBX19O60806 448 aa3.39□□□□□ -1.87
CSTF1-207ENST00000498689 IGHG4P01861 327 aa3.39□□□□□ -1.87
CSTF1-207ENST00000498689 GRPP07492 148 aa3.39□□□□□ -1.87
CSTF1-207ENST00000498689 ANXA4P09525 319 aaPredicted RBP3.39□□□□□ -1.87
CSTF1-207ENST00000498689 GKN3PP0CG01 181 aa3.39□□□□□ -1.87
CSTF1-207ENST00000498689 NCK1P16333 377 aa3.39□□□□□ -1.87
CSTF1-207ENST00000498689 RPS4Y1P22090 263 aaKnown RBP3.39□□□□□ -1.87
CSTF1-207ENST00000498689 PEX2P28328 305 aa3.39□□□□□ -1.87
CSTF1-207ENST00000498689 MAGEA4P43358 317 aa3.39□□□□□ -1.87
CSTF1-207ENST00000498689 ZNF273Q14593 569 aa3.39□□□□□ -1.87
CSTF1-207ENST00000498689 MICBQ29980 383 aa3.39□□□□□ -1.87
CSTF1-207ENST00000498689 PDCD4Q53EL6 469 aaKnown RBP3.39□□□□□ -1.87
CSTF1-207ENST00000498689 BEND6Q5SZJ8 279 aaPredicted RBP3.39□□□□□ -1.87
CSTF1-207ENST00000498689 AP1ARQ63HQ0 302 aa3.39□□□□□ -1.87
CSTF1-207ENST00000498689 STUMQ69YW2 141 aa3.39□□□□□ -1.87
CSTF1-207ENST00000498689 TMEM200BQ69YZ2 307 aa3.39□□□□□ -1.87
CSTF1-207ENST00000498689 TRMT10BQ6PF06 316 aaKnown RBP3.39□□□□□ -1.87
CSTF1-207ENST00000498689 DPPA2Q7Z7J5 298 aa3.39□□□□□ -1.87
CSTF1-207ENST00000498689 ISCA2Q86U28 154 aa3.39□□□□□ -1.87
CSTF1-207ENST00000498689 ZC3HC1Q86WB0 502 aaKnown RBP3.39□□□□□ -1.87
CSTF1-207ENST00000498689 NUDCD3Q8IVD9 361 aa3.39□□□□□ -1.87
CSTF1-207ENST00000498689 C11orf53Q8IXP5 236 aa3.39□□□□□ -1.87
CSTF1-207ENST00000498689 CELF2-AS1Q8N7Q2 184 aa3.39□□□□□ -1.87
CSTF1-207ENST00000498689 OR4F6Q8NGB9 312 aa3.39□□□□□ -1.87
CSTF1-207ENST00000498689 OR52L1Q8NGH7 329 aa3.39□□□□□ -1.87
CSTF1-207ENST00000498689 OR5K1Q8NHB7 308 aa3.39□□□□□ -1.87
CSTF1-207ENST00000498689 NDNFQ8TB73 568 aa3.39□□□□□ -1.87
CSTF1-207ENST00000498689 DNAJA4Q8WW22 397 aaPredicted RBP3.39□□□□□ -1.87
CSTF1-207ENST00000498689 SELENOMQ8WWX9 145 aa3.39□□□□□ -1.87
CSTF1-207ENST00000498689 ZNF566Q969W8 418 aa3.39□□□□□ -1.87
CSTF1-207ENST00000498689 EGLN2Q96KS0 407 aa3.39□□□□□ -1.87
CSTF1-207ENST00000498689 UBE2E2Q96LR5 201 aa3.39□□□□□ -1.87
CSTF1-207ENST00000498689 OR7D2Q96RA2 312 aa3.39□□□□□ -1.87
CSTF1-207ENST00000498689 CPPED1Q9BRF8 314 aaPredicted RBP3.39□□□□□ -1.87
CSTF1-207ENST00000498689 CHCHD6Q9BRQ6 235 aa3.39□□□□□ -1.87
CSTF1-207ENST00000498689 CCNB1IP1Q9NPC3 277 aa3.39□□□□□ -1.87
CSTF1-207ENST00000498689 MIEF1Q9NQG6 463 aa3.39□□□□□ -1.87
CSTF1-207ENST00000498689 ZCCHC3Q9NUD5 404 aaKnown RBP3.39□□□□□ -1.87
CSTF1-207ENST00000498689 ANO10Q9NW15 660 aa3.39□□□□□ -1.87
CSTF1-207ENST00000498689 VPS29Q9UBQ0 182 aa3.39□□□□□ -1.87
CSTF1-207ENST00000498689 ATP6V1HQ9UI12 483 aa3.39□□□□□ -1.87
CSTF1-207ENST00000498689 VSIG4Q9Y279 399 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms