RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, human

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C9orf3-222	ENST00000496567	KLB	Q86Z14	1044 aa		18.72	■□□□□ 0.59
C9orf3-222	ENST00000496567	OR8B12	Q8NGG6	310 aa		18.72	■□□□□ 0.59
C9orf3-222	ENST00000496567	OR2G2	Q8NGZ5	317 aa		18.72	■□□□□ 0.59
C9orf3-222	ENST00000496567	FBXW5	Q969U6	566 aa		18.72	■□□□□ 0.59
C9orf3-222	ENST00000496567	MARS2	Q96GW9	593 aa	Known RBP	18.72	■□□□□ 0.59
C9orf3-222	ENST00000496567	RGCC	Q9H4X1	137 aa		18.72	■□□□□ 0.59
C9orf3-222	ENST00000496567	OPA3	Q9H6K4	179 aa		18.72	■□□□□ 0.59
C9orf3-222	ENST00000496567	PTTG3P	Q9NZH4	202 aa		18.72	■□□□□ 0.59
C9orf3-222	ENST00000496567	ABCA4	P78363	2273 aa		18.71	■□□□□ 0.59
C9orf3-222	ENST00000496567	CFL1	P23528	166 aa	Known RBP	18.71	■□□□□ 0.59
C9orf3-222	ENST00000496567	APOBEC3A	P31941	199 aa	Predicted RBP	18.71	■□□□□ 0.59
C9orf3-222	ENST00000496567	CCR9	P51686	369 aa		18.71	■□□□□ 0.59
C9orf3-222	ENST00000496567	CDH15	P55291	814 aa		18.71	■□□□□ 0.59
C9orf3-222	ENST00000496567	TAS2R43	P59537	309 aa		18.71	■□□□□ 0.59
C9orf3-222	ENST00000496567	SELENOV	P59797	346 aa		18.71	■□□□□ 0.59
C9orf3-222	ENST00000496567	SPHAR	Q15513	63 aa		18.71	■□□□□ 0.59
C9orf3-222	ENST00000496567	FBXW12	Q6X9E4	464 aa		18.71	■□□□□ 0.59
C9orf3-222	ENST00000496567	ELMOD2	Q8IZ81	293 aa		18.71	■□□□□ 0.59
C9orf3-222	ENST00000496567	RNF166	Q96A37	237 aa	Predicted RBP	18.71	■□□□□ 0.59
C9orf3-222	ENST00000496567	ZNF319	Q9P2F9	582 aa		18.71	■□□□□ 0.59
C9orf3-222	ENST00000496567		A0A0U1RQV5	110 aa		18.7	■□□□□ 0.58
C9orf3-222	ENST00000496567		A0A1W2PPR1	153 aa		18.7	■□□□□ 0.58
C9orf3-222	ENST00000496567	ZNF250	P15622	560 aa		18.7	■□□□□ 0.58
C9orf3-222	ENST00000496567	FABP6	P51161	128 aa		18.7	■□□□□ 0.58
C9orf3-222	ENST00000496567	ALKBH1	Q13686	389 aa	Known RBP	18.7	■□□□□ 0.58
C9orf3-222	ENST00000496567	MED22	Q15528	200 aa		18.7	■□□□□ 0.58
C9orf3-222	ENST00000496567	ADIPOQ	Q15848	244 aa		18.7	■□□□□ 0.58
C9orf3-222	ENST00000496567	GLYATL3	Q5SZD4	288 aa		18.7	■□□□□ 0.58
C9orf3-222	ENST00000496567	MBNL2	Q5VZF2	373 aa	Known RBP	18.7	■□□□□ 0.58
C9orf3-222	ENST00000496567	RPL22L1	Q6P5R6	122 aa	Known RBP	18.7	■□□□□ 0.58
C9orf3-222	ENST00000496567	SPART	Q8N0X7	666 aa		18.7	■□□□□ 0.58
C9orf3-222	ENST00000496567	SYNPR	Q8TBG9	265 aa		18.7	■□□□□ 0.58
C9orf3-222	ENST00000496567	KLF14	Q8TD94	323 aa	Predicted RBP	18.7	■□□□□ 0.58
C9orf3-222	ENST00000496567	FAIM	Q9NVQ4	179 aa		18.7	■□□□□ 0.58
C9orf3-222	ENST00000496567	FRRS1L	Q9P0K9	344 aa		18.7	■□□□□ 0.58
C9orf3-222	ENST00000496567	LSM2	Q9Y333	95 aa	Known RBP	18.7	■□□□□ 0.58
C9orf3-222	ENST00000496567		E9PI62	339 aa		18.69	■□□□□ 0.58
C9orf3-222	ENST00000496567	OR4A8	P0C604	315 aa		18.69	■□□□□ 0.58
C9orf3-222	ENST00000496567	RAC2	P15153	192 aa		18.69	■□□□□ 0.58
C9orf3-222	ENST00000496567	MAP2K4	P45985	399 aa		18.69	■□□□□ 0.58
C9orf3-222	ENST00000496567	BDH1	Q02338	343 aa		18.69	■□□□□ 0.58
C9orf3-222	ENST00000496567	EMX1	Q04741	257 aa	Predicted RBP	18.69	■□□□□ 0.58
C9orf3-222	ENST00000496567	GK2	Q14410	553 aa	Predicted RBP	18.69	■□□□□ 0.58
C9orf3-222	ENST00000496567	GFOD2	Q3B7J2	385 aa		18.69	■□□□□ 0.58
C9orf3-222	ENST00000496567	WDR38	Q5JTN6	314 aa		18.69	■□□□□ 0.58
C9orf3-222	ENST00000496567	ZNF787	Q6DD87	383 aa		18.69	■□□□□ 0.58
C9orf3-222	ENST00000496567	HIST2H2BC	Q6DN03	193 aa		18.69	■□□□□ 0.58
C9orf3-222	ENST00000496567	PGAP1	Q75T13	922 aa		18.69	■□□□□ 0.58
C9orf3-222	ENST00000496567	MRPL21	Q7Z2W9	205 aa	Known RBP	18.69	■□□□□ 0.58
C9orf3-222	ENST00000496567	PRSS35	Q8N3Z0	413 aa		18.69	■□□□□ 0.58
C9orf3-222	ENST00000496567	TSPAN14	Q8NG11	270 aa		18.69	■□□□□ 0.58
C9orf3-222	ENST00000496567	OR2AE1	Q8NHA4	323 aa		18.69	■□□□□ 0.58
C9orf3-222	ENST00000496567	MRPL24	Q96A35	216 aa	Known RBP	18.69	■□□□□ 0.58
C9orf3-222	ENST00000496567	SPSB4	Q96A44	273 aa		18.69	■□□□□ 0.58
C9orf3-222	ENST00000496567	SGK3	Q96BR1	496 aa		18.69	■□□□□ 0.58
C9orf3-222	ENST00000496567	REEP6	Q96HR9	211 aa		18.69	■□□□□ 0.58
C9orf3-222	ENST00000496567	OR5M11	Q96RB7	305 aa		18.69	■□□□□ 0.58
C9orf3-222	ENST00000496567	POFUT1	Q9H488	388 aa		18.69	■□□□□ 0.58
C9orf3-222	ENST00000496567	ACOT13	Q9NPJ3	140 aa		18.69	■□□□□ 0.58
C9orf3-222	ENST00000496567	SLC22A13	Q9Y226	551 aa		18.69	■□□□□ 0.58
C9orf3-222	ENST00000496567	PTPN13	Q12923	2485 aa		18.69	■□□□□ 0.58
C9orf3-222	ENST00000496567		A0A087WXM4	84 aa		18.68	■□□□□ 0.58
C9orf3-222	ENST00000496567	TRBV2	A0A0J9YWF9	115 aa		18.68	■□□□□ 0.58
C9orf3-222	ENST00000496567	C5orf63	A6NC05	138 aa		18.68	■□□□□ 0.58
C9orf3-222	ENST00000496567	TTR	P02766	147 aa		18.68	■□□□□ 0.58
C9orf3-222	ENST00000496567	ANOS1	P23352	680 aa		18.68	■□□□□ 0.58
C9orf3-222	ENST00000496567	SERPINF1	P36955	418 aa		18.68	■□□□□ 0.58
C9orf3-222	ENST00000496567	GTF2A1	P52655	376 aa	Predicted RBP	18.68	■□□□□ 0.58
C9orf3-222	ENST00000496567	NANOS3	P60323	173 aa	Known RBP	18.68	■□□□□ 0.58
C9orf3-222	ENST00000496567	ZNF92	Q03936	586 aa		18.68	■□□□□ 0.58
C9orf3-222	ENST00000496567	ACSM1	Q08AH1	577 aa		18.68	■□□□□ 0.58
C9orf3-222	ENST00000496567	FBXL14	Q8N1E6	418 aa		18.68	■□□□□ 0.58
C9orf3-222	ENST00000496567	ZNF611	Q8N823	705 aa		18.68	■□□□□ 0.58
C9orf3-222	ENST00000496567	PPP1R14A	Q96A00	147 aa		18.68	■□□□□ 0.58
C9orf3-222	ENST00000496567	REPIN1	Q9BWE0	567 aa	Known RBP	18.68	■□□□□ 0.58
C9orf3-222	ENST00000496567	PLK3	Q9H4B4	646 aa		18.68	■□□□□ 0.58
C9orf3-222	ENST00000496567	UBTD1	Q9HAC8	227 aa		18.68	■□□□□ 0.58
C9orf3-222	ENST00000496567	DUSP13	Q9UII6	198 aa		18.68	■□□□□ 0.58
C9orf3-222	ENST00000496567	PLCE1	Q9P212	2302 aa		18.68	■□□□□ 0.58
C9orf3-222	ENST00000496567	UBC	P0CG48	685 aa	Known RBP	18.68	■□□□□ 0.58
C9orf3-222	ENST00000496567	SMIM18	P0DKX4	95 aa		18.68	■□□□□ 0.58
C9orf3-222	ENST00000496567	KIR3DL2	P43630	455 aa		18.68	■□□□□ 0.58
C9orf3-222	ENST00000496567	KLF3	P57682	345 aa	Predicted RBP	18.68	■□□□□ 0.58
C9orf3-222	ENST00000496567	HLX	Q14774	488 aa	Predicted RBP	18.68	■□□□□ 0.58
C9orf3-222	ENST00000496567	CDK5R1	Q15078	307 aa		18.68	■□□□□ 0.58
C9orf3-222	ENST00000496567	COMMD2	Q86X83	199 aa		18.68	■□□□□ 0.58
C9orf3-222	ENST00000496567	OR51E1	Q8TCB6	317 aa		18.68	■□□□□ 0.58
C9orf3-222	ENST00000496567	HAVCR1	Q96D42	359 aa		18.68	■□□□□ 0.58
C9orf3-222	ENST00000496567	CMBL	Q96DG6	245 aa		18.68	■□□□□ 0.58
C9orf3-222	ENST00000496567	FZR1	Q9UM11	496 aa		18.68	■□□□□ 0.58
C9orf3-222	ENST00000496567	TMEM212	A6NML5	194 aa		18.67	■□□□□ 0.58
C9orf3-222	ENST00000496567	OGG1	O15527	345 aa		18.67	■□□□□ 0.58
C9orf3-222	ENST00000496567	LALBA	P00709	142 aa		18.67	■□□□□ 0.58
C9orf3-222	ENST00000496567	SELE	P16581	610 aa		18.67	■□□□□ 0.58
C9orf3-222	ENST00000496567	TTK	P33981	857 aa		18.67	■□□□□ 0.58
C9orf3-222	ENST00000496567	EVX1	P49640	407 aa		18.67	■□□□□ 0.58
C9orf3-222	ENST00000496567	MOG	Q16653	247 aa		18.67	■□□□□ 0.58
C9orf3-222	ENST00000496567	TMEM244	Q5VVB8	128 aa		18.67	■□□□□ 0.58
C9orf3-222	ENST00000496567	XAF1	Q6GPH4	301 aa		18.67	■□□□□ 0.58
C9orf3-222	ENST00000496567	ZNF367	Q7RTV3	350 aa		18.67	■□□□□ 0.58

Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms