RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 KCNJ15Q99712 375 aa13.11□□□□□ -0.31
LIMS2-216ENST00000494613 OPN4Q9UHM6 478 aa13.11□□□□□ -0.31
LIMS2-216ENST00000494613 N6AMT1Q9Y5N5 214 aa13.11□□□□□ -0.31
LIMS2-216ENST00000494613 PPIAL4EA0A075B759 164 aa13.1□□□□□ -0.31
LIMS2-216ENST00000494613 A0A0A6YYJ9 748 aa13.1□□□□□ -0.31
LIMS2-216ENST00000494613 PPIAL4CA0A0B4J2A2 164 aa13.1□□□□□ -0.31
LIMS2-216ENST00000494613 ARRDC5A6NEK1 342 aa13.1□□□□□ -0.31
LIMS2-216ENST00000494613 PPIAL4DF5H284 164 aa13.1□□□□□ -0.31
LIMS2-216ENST00000494613 GSC2O15499 205 aa13.1□□□□□ -0.31
LIMS2-216ENST00000494613 DNAJC8O75937 253 aaPredicted RBP13.1□□□□□ -0.31
LIMS2-216ENST00000494613 VENTXO95231 258 aa13.1□□□□□ -0.31
LIMS2-216ENST00000494613 PPIAL4FP0DN26 164 aa13.1□□□□□ -0.31
LIMS2-216ENST00000494613 ZNF3P17036 446 aa13.1□□□□□ -0.31
LIMS2-216ENST00000494613 HOXB6P17509 224 aaKnown RBP13.1□□□□□ -0.31
LIMS2-216ENST00000494613 ADRA2CP18825 462 aa13.1□□□□□ -0.31
LIMS2-216ENST00000494613 CA6P23280 308 aa13.1□□□□□ -0.31
LIMS2-216ENST00000494613 MDH2P40926 338 aaKnown RBP13.1□□□□□ -0.31
LIMS2-216ENST00000494613 MMP16P51512 607 aa13.1□□□□□ -0.31
LIMS2-216ENST00000494613 SEC61A1P61619 476 aaKnown RBP13.1□□□□□ -0.31
LIMS2-216ENST00000494613 ZNF181Q2M3W8 571 aa13.1□□□□□ -0.31
LIMS2-216ENST00000494613 SPATC1Q76KD6 591 aa13.1□□□□□ -0.31
LIMS2-216ENST00000494613 MRPL21Q7Z2W9 205 aaKnown RBP13.1□□□□□ -0.31
LIMS2-216ENST00000494613 HS3ST5Q8IZT8 346 aa13.1□□□□□ -0.31
LIMS2-216ENST00000494613 TEX29Q8N6K0 151 aa13.1□□□□□ -0.31
LIMS2-216ENST00000494613 PAPD5Q8NDF8 572 aaKnown RBP13.1□□□□□ -0.31
LIMS2-216ENST00000494613 OR2AE1Q8NHA4 323 aa13.1□□□□□ -0.31
LIMS2-216ENST00000494613 NANPQ8TBE9 248 aa13.1□□□□□ -0.31
LIMS2-216ENST00000494613 COPS4Q9BT78 406 aa13.1□□□□□ -0.31
LIMS2-216ENST00000494613 POMPQ9Y244 141 aa13.1□□□□□ -0.31
LIMS2-216ENST00000494613 POLR3KQ9Y2Y1 108 aaPredicted RBP13.1□□□□□ -0.31
LIMS2-216ENST00000494613 TCRBV3S1A0A5B6 114 aa13.09□□□□□ -0.31
LIMS2-216ENST00000494613 GGT3PA6NGU5 568 aa13.09□□□□□ -0.31
LIMS2-216ENST00000494613 F5H0A9 414 aaPredicted RBP13.09□□□□□ -0.31
LIMS2-216ENST00000494613 GLCEO94923 617 aa13.09□□□□□ -0.31
LIMS2-216ENST00000494613 SLC2A1P11166 492 aa13.09□□□□□ -0.31
LIMS2-216ENST00000494613 GSTT1P30711 240 aa13.09□□□□□ -0.31
LIMS2-216ENST00000494613 GATA4P43694 442 aa13.09□□□□□ -0.31
LIMS2-216ENST00000494613 SLC15A1P46059 708 aa13.09□□□□□ -0.31
LIMS2-216ENST00000494613 CBX1P83916 185 aa13.09□□□□□ -0.31
LIMS2-216ENST00000494613 CDK5Q00535 292 aa13.09□□□□□ -0.31
LIMS2-216ENST00000494613 EIF2B1Q14232 305 aaKnown RBP13.09□□□□□ -0.31
LIMS2-216ENST00000494613 FLOT2Q14254 428 aa13.09□□□□□ -0.31
LIMS2-216ENST00000494613 MPPED2Q15777 294 aa13.09□□□□□ -0.31
LIMS2-216ENST00000494613 FAM201AQ5SY85 155 aa13.09□□□□□ -0.31
LIMS2-216ENST00000494613 GLYATL3Q5SZD4 288 aa13.09□□□□□ -0.31
LIMS2-216ENST00000494613 DPY19L4Q7Z388 723 aa13.09□□□□□ -0.31
LIMS2-216ENST00000494613 C1QL2Q7Z5L3 287 aa13.09□□□□□ -0.31
LIMS2-216ENST00000494613 CELF2-AS1Q8N7Q2 184 aa13.09□□□□□ -0.31
LIMS2-216ENST00000494613 ABHD6Q9BV23 337 aa13.09□□□□□ -0.31
LIMS2-216ENST00000494613 OR51V1Q9H2C8 321 aa13.09□□□□□ -0.31
LIMS2-216ENST00000494613 YY1AP1Q9H869 796 aa13.09□□□□□ -0.31
LIMS2-216ENST00000494613 MARCH7Q9H992 704 aa13.09□□□□□ -0.31
LIMS2-216ENST00000494613 ZNF556Q9HAH1 456 aa13.09□□□□□ -0.31
LIMS2-216ENST00000494613 DNAJB9Q9UBS3 223 aa13.09□□□□□ -0.31
LIMS2-216ENST00000494613 TANC2Q9HCD6 1990 aa13.09□□□□□ -0.31
LIMS2-216ENST00000494613 WNK2Q9Y3S1 2297 aa13.08□□□□□ -0.32
LIMS2-216ENST00000494613 LRRC30A6NM36 301 aa13.08□□□□□ -0.32
LIMS2-216ENST00000494613 CEACAM18A8MTB9 384 aa13.08□□□□□ -0.32
LIMS2-216ENST00000494613 GMDSO60547 372 aa13.08□□□□□ -0.32
LIMS2-216ENST00000494613 FKBP6O75344 327 aa13.08□□□□□ -0.32
LIMS2-216ENST00000494613 E2F6O75461 281 aa13.08□□□□□ -0.32
LIMS2-216ENST00000494613 FSTL3O95633 263 aa13.08□□□□□ -0.32
LIMS2-216ENST00000494613 HMGN1P05114 100 aa13.08□□□□□ -0.32
LIMS2-216ENST00000494613 OSMP13725 252 aa13.08□□□□□ -0.32
LIMS2-216ENST00000494613 ANXA8P13928 327 aa13.08□□□□□ -0.32
LIMS2-216ENST00000494613 CD200P41217 278 aa13.08□□□□□ -0.32
LIMS2-216ENST00000494613 SCGB2A2Q13296 93 aa13.08□□□□□ -0.32
LIMS2-216ENST00000494613 OR8G1Q15617 311 aa13.08□□□□□ -0.32
LIMS2-216ENST00000494613 ERI1Q8IV48 349 aaKnown RBP13.08□□□□□ -0.32
LIMS2-216ENST00000494613 MUC20Q8N307 709 aaPredicted RBP13.08□□□□□ -0.32
LIMS2-216ENST00000494613 ERGIC1Q969X5 290 aa13.08□□□□□ -0.32
LIMS2-216ENST00000494613 SGK3Q96BR1 496 aa13.08□□□□□ -0.32
LIMS2-216ENST00000494613 INTS14Q96SY0 518 aa13.08□□□□□ -0.32
LIMS2-216ENST00000494613 TMEM246Q9BRR3 403 aa13.08□□□□□ -0.32
LIMS2-216ENST00000494613 CADM1Q9BY67 442 aaKnown RBP13.08□□□□□ -0.32
LIMS2-216ENST00000494613 SLC22A4Q9H015 551 aa13.08□□□□□ -0.32
LIMS2-216ENST00000494613 NTN4Q9HB63 628 aa13.08□□□□□ -0.32
LIMS2-216ENST00000494613 UFSP2Q9NUQ7 469 aa13.08□□□□□ -0.32
LIMS2-216ENST00000494613 PPIAL4AQ9Y536 164 aa13.08□□□□□ -0.32
LIMS2-216ENST00000494613 STAB1Q9NY15 2570 aa13.08□□□□□ -0.32
LIMS2-216ENST00000494613 ZNF878C9JN71 531 aa13.07□□□□□ -0.32
LIMS2-216ENST00000494613 PRR23D1E9PI22 279 aaPredicted RBP13.07□□□□□ -0.32
LIMS2-216ENST00000494613 RGS9O75916 674 aaPredicted RBP13.07□□□□□ -0.32
LIMS2-216ENST00000494613 PRR23D2P0DMB1 279 aaPredicted RBP13.07□□□□□ -0.32
LIMS2-216ENST00000494613 EPHA1P21709 976 aa13.07□□□□□ -0.32
LIMS2-216ENST00000494613 CPT2P23786 658 aa13.07□□□□□ -0.32
LIMS2-216ENST00000494613 GRB2P62993 217 aaKnown RBP13.07□□□□□ -0.32
LIMS2-216ENST00000494613 BNIP1Q12981 228 aa13.07□□□□□ -0.32
LIMS2-216ENST00000494613 ZNF154Q13106 437 aa13.07□□□□□ -0.32
LIMS2-216ENST00000494613 ESCO2Q56NI9 601 aa13.07□□□□□ -0.32
LIMS2-216ENST00000494613 TMEM236Q5W0B7 351 aa13.07□□□□□ -0.32
LIMS2-216ENST00000494613 PLBD1Q6P4A8 553 aa13.07□□□□□ -0.32
LIMS2-216ENST00000494613 SHFQ7M4L6 423 aa13.07□□□□□ -0.32
LIMS2-216ENST00000494613 CPOQ8IVL8 374 aa13.07□□□□□ -0.32
LIMS2-216ENST00000494613 TIGD4Q8IY51 512 aa13.07□□□□□ -0.32
LIMS2-216ENST00000494613 C1orf87Q8N0U7 546 aa13.07□□□□□ -0.32
LIMS2-216ENST00000494613 DEFB108BQ8NET1 73 aa13.07□□□□□ -0.32
LIMS2-216ENST00000494613 OR6N2Q8NGY6 317 aa13.07□□□□□ -0.32
LIMS2-216ENST00000494613 Q8TCH9 128 aa13.07□□□□□ -0.32
LIMS2-216ENST00000494613 ZNF418Q8TF45 676 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms