RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 REEP3Q6NUK4 255 aa2.72□□□□□ -1.97
SMC4-224ENST00000494612 PLET1Q6UQ28 207 aa2.72□□□□□ -1.97
SMC4-224ENST00000494612 PP632Q6XCG6 107 aa2.72□□□□□ -1.97
SMC4-224ENST00000494612 TEX43Q6ZNM6 134 aa2.72□□□□□ -1.97
SMC4-224ENST00000494612 FAM92BQ6ZTR7 304 aa2.72□□□□□ -1.97
SMC4-224ENST00000494612 PEX26Q7Z412 305 aa2.72□□□□□ -1.97
SMC4-224ENST00000494612 HDDC2Q7Z4H3 204 aa2.72□□□□□ -1.97
SMC4-224ENST00000494612 PGAM4Q8N0Y7 254 aa2.72□□□□□ -1.97
SMC4-224ENST00000494612 GTPBP8Q8N3Z3 284 aaPredicted RBP2.72□□□□□ -1.97
SMC4-224ENST00000494612 CCDC148Q8NFR7 591 aa2.72□□□□□ -1.97
SMC4-224ENST00000494612 OR5W2Q8NH69 310 aa2.72□□□□□ -1.97
SMC4-224ENST00000494612 GBF1Q92538 1859 aa2.72□□□□□ -1.97
SMC4-224ENST00000494612 RBMXL1Q96E39 390 aaKnown RBP2.72□□□□□ -1.97
SMC4-224ENST00000494612 C20orf24Q9BUV8 137 aa2.72□□□□□ -1.97
SMC4-224ENST00000494612 SLC25A2Q9BXI2 301 aa2.72□□□□□ -1.97
SMC4-224ENST00000494612 ILKAPQ9H0C8 392 aaPredicted RBP2.72□□□□□ -1.97
SMC4-224ENST00000494612 CRLF2Q9HC73 371 aa2.72□□□□□ -1.97
SMC4-224ENST00000494612 UVRAGQ9P2Y5 699 aa2.72□□□□□ -1.97
SMC4-224ENST00000494612 UXTQ9UBK9 157 aaPredicted RBP2.72□□□□□ -1.97
SMC4-224ENST00000494612 OR12D3Q9UGF7 316 aa2.72□□□□□ -1.97
SMC4-224ENST00000494612 GAKO14976 1311 aa2.71□□□□□ -1.98
SMC4-224ENST00000494612 MROH7Q68CQ1 1323 aa2.71□□□□□ -1.98
SMC4-224ENST00000494612 ARPC4-TTLL3A0A0A6YYG9 625 aa2.71□□□□□ -1.98
SMC4-224ENST00000494612 C9JVG2 144 aa2.71□□□□□ -1.98
SMC4-224ENST00000494612 DNALI1O14645 258 aaPredicted RBP2.71□□□□□ -1.98
SMC4-224ENST00000494612 RAB3DO95716 219 aa2.71□□□□□ -1.98
SMC4-224ENST00000494612 GZMAP12544 262 aa2.71□□□□□ -1.98
SMC4-224ENST00000494612 OMGP23515 440 aa2.71□□□□□ -1.98
SMC4-224ENST00000494612 CSNK1A1P48729 337 aa2.71□□□□□ -1.98
SMC4-224ENST00000494612 LINC00315P59091 139 aa2.71□□□□□ -1.98
SMC4-224ENST00000494612 EIF3EP60228 445 aaKnown RBP2.71□□□□□ -1.98
SMC4-224ENST00000494612 ERCC8Q13216 396 aa2.71□□□□□ -1.98
SMC4-224ENST00000494612 SELENBP1Q13228 472 aa2.71□□□□□ -1.98
SMC4-224ENST00000494612 CHRNA6Q15825 494 aa2.71□□□□□ -1.98
SMC4-224ENST00000494612 LINC00483Q53H64 154 aa2.71□□□□□ -1.98
SMC4-224ENST00000494612 C9orf135Q5VTT2 229 aa2.71□□□□□ -1.98
SMC4-224ENST00000494612 C12orf54Q6X4T0 127 aa2.71□□□□□ -1.98
SMC4-224ENST00000494612 MBOAT1Q6ZNC8 495 aa2.71□□□□□ -1.98
SMC4-224ENST00000494612 SLC16A14Q7RTX9 510 aa2.71□□□□□ -1.98
SMC4-224ENST00000494612 OR7G2Q8NG99 324 aa2.71□□□□□ -1.98
SMC4-224ENST00000494612 OR4S2Q8NH73 311 aa2.71□□□□□ -1.98
SMC4-224ENST00000494612 LRRC29Q8WV35 223 aa2.71□□□□□ -1.98
SMC4-224ENST00000494612 CAPSLQ8WWF8 208 aa2.71□□□□□ -1.98
SMC4-224ENST00000494612 EEF1AKMT3Q96AZ1 226 aa2.71□□□□□ -1.98
SMC4-224ENST00000494612 CREB3L1Q96BA8 519 aa2.71□□□□□ -1.98
SMC4-224ENST00000494612 GLT1D1Q96MS3 346 aa2.71□□□□□ -1.98
SMC4-224ENST00000494612 ZNF578Q96N58 590 aaPredicted RBP2.71□□□□□ -1.98
SMC4-224ENST00000494612 RACGAP1Q9H0H5 632 aa2.71□□□□□ -1.98
SMC4-224ENST00000494612 NEUROG2Q9H2A3 272 aa2.71□□□□□ -1.98
SMC4-224ENST00000494612 RETNQ9HD89 108 aa2.71□□□□□ -1.98
SMC4-224ENST00000494612 TMEM9BQ9NQ34 198 aa2.71□□□□□ -1.98
SMC4-224ENST00000494612 LHX9Q9NQ69 397 aa2.71□□□□□ -1.98
SMC4-224ENST00000494612 RPRD1BQ9NQG5 326 aaKnown RBP2.71□□□□□ -1.98
SMC4-224ENST00000494612 VANGL2Q9ULK5 521 aa2.71□□□□□ -1.98
SMC4-224ENST00000494612 RFX7Q2KHR2 1363 aa2.71□□□□□ -1.98
SMC4-224ENST00000494612 MUC19Q7Z5P9 8384 aa2.71□□□□□ -1.98
SMC4-224ENST00000494612 A0A0G2JMZ2 1700 aa2.71□□□□□ -1.98
SMC4-224ENST00000494612 ZNF236Q9UL36 1845 aa2.7□□□□□ -1.98
SMC4-224ENST00000494612 IGHV5-51A0A0C4DH38 117 aa2.7□□□□□ -1.98
SMC4-224ENST00000494612 A0A1B0GW55 424 aa2.7□□□□□ -1.98
SMC4-224ENST00000494612 H0YIV9 168 aa2.7□□□□□ -1.98
SMC4-224ENST00000494612 NUPL2O15504 423 aaKnown RBP2.7□□□□□ -1.98
SMC4-224ENST00000494612 RDH16O75452 317 aa2.7□□□□□ -1.98
SMC4-224ENST00000494612 CNMDO75829 334 aa2.7□□□□□ -1.98
SMC4-224ENST00000494612 H6PDO95479 791 aa2.7□□□□□ -1.98
SMC4-224ENST00000494612 EIF4EP06730 217 aaKnown RBP2.7□□□□□ -1.98
SMC4-224ENST00000494612 DUX4L2P0CJ85 424 aa2.7□□□□□ -1.98
SMC4-224ENST00000494612 DUX4L3P0CJ86 424 aa2.7□□□□□ -1.98
SMC4-224ENST00000494612 DUX4L5P0CJ88 424 aa2.7□□□□□ -1.98
SMC4-224ENST00000494612 DUX4L6P0CJ89 424 aa2.7□□□□□ -1.98
SMC4-224ENST00000494612 DUX4L7P0CJ90 424 aa2.7□□□□□ -1.98
SMC4-224ENST00000494612 DCKP27707 260 aa2.7□□□□□ -1.98
SMC4-224ENST00000494612 GTF2E2P29084 291 aaKnown RBP2.7□□□□□ -1.98
SMC4-224ENST00000494612 CEACAM3P40198 252 aa2.7□□□□□ -1.98
SMC4-224ENST00000494612 PFN3P60673 137 aa2.7□□□□□ -1.98
SMC4-224ENST00000494612 FAM83EQ2M2I3 478 aa2.7□□□□□ -1.98
SMC4-224ENST00000494612 CEMP1Q6PRD7 247 aaPredicted RBP2.7□□□□□ -1.98
SMC4-224ENST00000494612 DUX4L9Q6RFH8 374 aaPredicted RBP2.7□□□□□ -1.98
SMC4-224ENST00000494612 ZNF695Q8IW36 515 aa2.7□□□□□ -1.98
SMC4-224ENST00000494612 SAXO1Q8IYX7 474 aa2.7□□□□□ -1.98
SMC4-224ENST00000494612 FAM184AQ8NB25 1140 aa2.7□□□□□ -1.98
SMC4-224ENST00000494612 OR4A4PQ8NGN8 299 aa2.7□□□□□ -1.98
SMC4-224ENST00000494612 SYNPRQ8TBG9 265 aa2.7□□□□□ -1.98
SMC4-224ENST00000494612 SLC38A4Q969I6 547 aa2.7□□□□□ -1.98
SMC4-224ENST00000494612 OR2A5Q96R48 311 aa2.7□□□□□ -1.98
SMC4-224ENST00000494612 LCE3DQ9BYE3 92 aa2.7□□□□□ -1.98
SMC4-224ENST00000494612 EXO5Q9H790 373 aa2.7□□□□□ -1.98
SMC4-224ENST00000494612 WFDC1Q9HC57 220 aa2.7□□□□□ -1.98
SMC4-224ENST00000494612 NEK6Q9HC98 313 aa2.7□□□□□ -1.98
SMC4-224ENST00000494612 ZNF160Q9HCG1 818 aa2.7□□□□□ -1.98
SMC4-224ENST00000494612 ZDHHC4Q9NPG8 344 aa2.7□□□□□ -1.98
SMC4-224ENST00000494612 HRASLS2Q9NWW9 162 aa2.7□□□□□ -1.98
SMC4-224ENST00000494612 DUX4Q9UBX2 424 aa2.7□□□□□ -1.98
SMC4-224ENST00000494612 MTCH2Q9Y6C9 303 aa2.7□□□□□ -1.98
SMC4-224ENST00000494612 WDFY4Q6ZS81 3184 aa2.7□□□□□ -1.98
SMC4-224ENST00000494612 IGHV3-66A0A0C4DH42 116 aa2.69□□□□□ -1.98
SMC4-224ENST00000494612 A0A1B0GVX0 72 aa2.69□□□□□ -1.98
SMC4-224ENST00000494612 TCP11X1B4DZS4 312 aa2.69□□□□□ -1.98
SMC4-224ENST00000494612 L7N2F9 121 aa2.69□□□□□ -1.98
SMC4-224ENST00000494612 AIREO43918 545 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms