RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 GUSBP1Q15486 140 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 TAB1Q15750 504 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 DEFB113Q30KQ7 82 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 MS4A18Q3C1V0 323 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 SLC25A35Q3KQZ1 300 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 CCDC153Q494R4 210 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 GPAT3Q53EU6 434 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 HIKESHIQ53FT3 197 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 SPRNQ5BIV9 151 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 NHSL2Q5HYW2 709 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 PAGE3Q5JUK9 113 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 KRBOX4Q5JUW0 171 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 MRPL2Q5T653 305 aaKnown RBP2.4□□□□□ -2.03
PTCD3-218ENST00000493430 CPTPQ5TA50 214 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 HBMQ6B0K9 141 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 DHRS7BQ6IAN0 325 aaPredicted RBP2.4□□□□□ -2.03
PTCD3-218ENST00000493430 TMEM211Q6ICI0 200 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 CGB2Q6NT52 195 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 NIPAL1Q6NVV3 410 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 TFAP2EQ6VUC0 442 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 RBPMS2Q6ZRY4 209 aaKnown RBP2.4□□□□□ -2.03
PTCD3-218ENST00000493430 C6orf120Q7Z4R8 191 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 ZER1Q7Z7L7 766 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 CARM1Q86X55 608 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 TGIF2LYQ8IUE0 185 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 RBM45Q8IUH3 476 aaKnown RBP2.4□□□□□ -2.03
PTCD3-218ENST00000493430 ZCCHC24Q8N2G6 241 aaKnown RBP2.4□□□□□ -2.03
PTCD3-218ENST00000493430 CADM2Q8N3J6 435 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 ARFGAP2Q8N6H7 521 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 TMEM99Q8N816 258 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 GBP7Q8N8V2 638 aaPredicted RBP2.4□□□□□ -2.03
PTCD3-218ENST00000493430 OR5T2Q8NGG2 359 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 TYMSOSQ8TAI1 123 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 ACMSDQ8TDX5 336 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 ZFP90Q8TF47 636 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 SSMEM1Q8WWF3 244 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 ZNF75CPQ92670 426 aaPredicted RBP2.4□□□□□ -2.03
PTCD3-218ENST00000493430 ROPN1LQ96C74 230 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 CCL19Q99731 98 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 OVOL2Q9BRP0 275 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 SLC35A5Q9BS91 424 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 NAA11Q9BSU3 229 aaPredicted RBP2.4□□□□□ -2.03
PTCD3-218ENST00000493430 CHCHD5Q9BSY4 110 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 MED18Q9BUE0 208 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 PRRG4Q9BZD6 226 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 DPY30Q9C005 99 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 ACTR6Q9GZN1 396 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 SLC38A1Q9H2H9 487 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 OR51B6Q9H340 312 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 RNF122Q9H9V4 155 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.4□□□□□ -2.03
PTCD3-218ENST00000493430 AIG1Q9NVV5 245 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 TAS2R9Q9NYW1 312 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 SLC25A37Q9NYZ2 338 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 KCNN3Q9UGI6 736 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 ATP6V1HQ9UI12 483 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 TMCO1Q9UM00 188 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 FZR1Q9UM11 496 aa2.4□□□□□ -2.03
PTCD3-218ENST00000493430 STAB1Q9NY15 2570 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 IGKV1D-42A0A075B6H8 117 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 IGHV4-30-2A0A087WSY4 118 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 UQCRHLA0A096LP55 91 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 IGLV3-32A0A0A0MS00 114 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 TMED7-TICAM2A0A0A6YYA0 188 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 DPRXA6NFQ7 191 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 ZNF716A6NP11 495 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 ATP6V1G2-DDX39BF2Z307 99 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 M0R1B8 84 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 KPNA4O00629 521 aaPredicted RBP2.39□□□□□ -2.03
PTCD3-218ENST00000493430 IMPA2O14732 288 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 KIAA0513O60268 411 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 TPST2O60704 377 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 FMO6PO60774 539 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 SS18L1O75177 396 aaPredicted RBP2.39□□□□□ -2.03
PTCD3-218ENST00000493430 UPK3AO75631 287 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 CBR3O75828 277 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 SNX4O95219 450 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 LGI1O95970 557 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 CSTAP01040 98 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 SERPINE1P05121 402 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 IGFBP1P08833 259 aaPredicted RBP2.39□□□□□ -2.03
PTCD3-218ENST00000493430 NEFHP12036 1026 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 GABRA1P14867 456 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 CPN1P15169 458 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 TBXA2RP21731 343 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 CRYGSP22914 178 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 DNASE1P24855 282 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 IL2RGP31785 369 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 MPIP34949 423 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 OPRM1P35372 400 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 CHI3L1P36222 383 aaPredicted RBP2.39□□□□□ -2.03
PTCD3-218ENST00000493430 IDH2P48735 452 aaKnown RBP2.39□□□□□ -2.03
PTCD3-218ENST00000493430 CTBP2P56545 445 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 DSCR4P56555 118 aaPredicted RBP2.39□□□□□ -2.03
PTCD3-218ENST00000493430 CLDN8P56748 225 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 OR2B6P58173 313 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 MTPNP58546 118 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 ERVS71-1P61550 626 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 GLO1Q04760 184 aa2.39□□□□□ -2.03
PTCD3-218ENST00000493430 STX3Q13277 289 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms