RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 OR8B12Q8NGG6 310 aa14.8□□□□□ -0.04
LIME1-208ENST00000493265 SLC25A40Q8TBP6 338 aa14.8□□□□□ -0.04
LIME1-208ENST00000493265 AKAP1Q92667 903 aaKnown RBP eCLIP14.8□□□□□ -0.04
LIME1-208ENST00000493265 OR5M11Q96RB7 305 aa14.8□□□□□ -0.04
LIME1-208ENST00000493265 NR1H4Q96RI1 486 aaPredicted RBP14.8□□□□□ -0.04
LIME1-208ENST00000493265 BCL2L14Q9BZR8 327 aa14.8□□□□□ -0.04
LIME1-208ENST00000493265 OR2J1Q9GZK6 312 aa14.8□□□□□ -0.04
LIME1-208ENST00000493265 PBOV1Q9GZY1 135 aa14.8□□□□□ -0.04
LIME1-208ENST00000493265 SP140LQ9H930 580 aa14.8□□□□□ -0.04
LIME1-208ENST00000493265 TBCCD1Q9NVR7 557 aa14.8□□□□□ -0.04
LIME1-208ENST00000493265 BABAM2Q9NXR7 383 aa14.8□□□□□ -0.04
LIME1-208ENST00000493265 ZNF319Q9P2F9 582 aa14.8□□□□□ -0.04
LIME1-208ENST00000493265 OR52A1Q9UKL2 312 aa14.8□□□□□ -0.04
LIME1-208ENST00000493265 HEATR1Q9H583 2144 aaKnown RBP14.8□□□□□ -0.04
LIME1-208ENST00000493265 E7EQL1 145 aa14.79□□□□□ -0.04
LIME1-208ENST00000493265 SRSF10O75494 262 aaKnown RBP14.79□□□□□ -0.04
LIME1-208ENST00000493265 ATE1O95260 518 aa14.79□□□□□ -0.04
LIME1-208ENST00000493265 HSMCR30P0CW71 290 aa14.79□□□□□ -0.04
LIME1-208ENST00000493265 DCTDP32321 178 aa14.79□□□□□ -0.04
LIME1-208ENST00000493265 FABP6P51161 128 aa14.79□□□□□ -0.04
LIME1-208ENST00000493265 NKX6-1P78426 367 aaPredicted RBP14.79□□□□□ -0.04
LIME1-208ENST00000493265 MALLQ13021 153 aa14.79□□□□□ -0.04
LIME1-208ENST00000493265 DOC2BQ14184 412 aa14.79□□□□□ -0.04
LIME1-208ENST00000493265 TIGD6Q17RP2 521 aa14.79□□□□□ -0.04
LIME1-208ENST00000493265 ZNF672Q499Z4 452 aaPredicted RBP14.79□□□□□ -0.04
LIME1-208ENST00000493265 GLYATL3Q5SZD4 288 aa14.79□□□□□ -0.04
LIME1-208ENST00000493265 XAF1Q6GPH4 301 aa14.79□□□□□ -0.04
LIME1-208ENST00000493265 RGS7BPQ6MZT1 257 aaPredicted RBP14.79□□□□□ -0.04
LIME1-208ENST00000493265 PRSS45Q7RTY3 260 aa14.79□□□□□ -0.04
LIME1-208ENST00000493265 CATSPERDQ86XM0 798 aa14.79□□□□□ -0.04
LIME1-208ENST00000493265 SPARTQ8N0X7 666 aa14.79□□□□□ -0.04
LIME1-208ENST00000493265 PRSS35Q8N3Z0 413 aa14.79□□□□□ -0.04
LIME1-208ENST00000493265 SVOPQ8N4V2 548 aa14.79□□□□□ -0.04
LIME1-208ENST00000493265 TSPAN14Q8NG11 270 aa14.79□□□□□ -0.04
LIME1-208ENST00000493265 OR5L1Q8NGL2 311 aa14.79□□□□□ -0.04
LIME1-208ENST00000493265 LILRB1Q8NHL6 650 aaPredicted RBP14.79□□□□□ -0.04
LIME1-208ENST00000493265 TMEM204Q9BSN7 226 aa14.79□□□□□ -0.04
LIME1-208ENST00000493265 OR10A2Q9H208 303 aa14.79□□□□□ -0.04
LIME1-208ENST00000493265 UBTD1Q9HAC8 227 aa14.79□□□□□ -0.04
LIME1-208ENST00000493265 CA10Q9NS85 328 aa14.79□□□□□ -0.04
LIME1-208ENST00000493265 CISD1Q9NZ45 108 aaKnown RBP14.79□□□□□ -0.04
LIME1-208ENST00000493265 A0A1W2PPR1 153 aa14.78□□□□□ -0.04
LIME1-208ENST00000493265 CTAG2O75638 210 aa14.78□□□□□ -0.04
LIME1-208ENST00000493265 LALBAP00709 142 aa14.78□□□□□ -0.04
LIME1-208ENST00000493265 RPSAP08865 295 aaKnown RBP14.78□□□□□ -0.04
LIME1-208ENST00000493265 ATP6V1B1P15313 513 aa14.78□□□□□ -0.04
LIME1-208ENST00000493265 MPV17P39210 176 aa14.78□□□□□ -0.04
LIME1-208ENST00000493265 KIR3DL2P43630 455 aa14.78□□□□□ -0.04
LIME1-208ENST00000493265 MMP16P51512 607 aa14.78□□□□□ -0.04
LIME1-208ENST00000493265 NANOS3P60323 173 aaKnown RBP14.78□□□□□ -0.04
LIME1-208ENST00000493265 RPS23P62266 143 aaKnown RBP14.78□□□□□ -0.04
LIME1-208ENST00000493265 EMX1Q04741 257 aaPredicted RBP14.78□□□□□ -0.04
LIME1-208ENST00000493265 WDR38Q5JTN6 314 aa14.78□□□□□ -0.04
LIME1-208ENST00000493265 RNLSQ5VYX0 342 aa14.78□□□□□ -0.04
LIME1-208ENST00000493265 ZNF544Q6NX49 715 aa14.78□□□□□ -0.04
LIME1-208ENST00000493265 COLCA1Q6ZS62 124 aa14.78□□□□□ -0.04
LIME1-208ENST00000493265 NUP37Q8NFH4 326 aa14.78□□□□□ -0.04
LIME1-208ENST00000493265 OR52H1Q8NGJ2 320 aa14.78□□□□□ -0.04
LIME1-208ENST00000493265 OR2G2Q8NGZ5 317 aa14.78□□□□□ -0.04
LIME1-208ENST00000493265 RNF166Q96A37 237 aaPredicted RBP14.78□□□□□ -0.04
LIME1-208ENST00000493265 REEP6Q96HR9 211 aa14.78□□□□□ -0.04
LIME1-208ENST00000493265 SYT3Q9BQG1 590 aa14.78□□□□□ -0.04
LIME1-208ENST00000493265 CLEC4MQ9H2X3 399 aaPredicted RBP14.78□□□□□ -0.04
LIME1-208ENST00000493265 TRIM36Q9NQ86 728 aa14.78□□□□□ -0.04
LIME1-208ENST00000493265 G6PC2Q9NQR9 355 aa14.78□□□□□ -0.04
LIME1-208ENST00000493265 FRRS1LQ9P0K9 344 aa14.78□□□□□ -0.04
LIME1-208ENST00000493265 DUSP13Q9UII6 198 aa14.78□□□□□ -0.04
LIME1-208ENST00000493265 SPG11Q96JI7 2443 aa14.78□□□□□ -0.04
LIME1-208ENST00000493265 TRBV2A0A0J9YWF9 115 aa14.77□□□□□ -0.05
LIME1-208ENST00000493265 P2RY10O00398 339 aa14.77□□□□□ -0.05
LIME1-208ENST00000493265 MRPS14O60783 128 aaKnown RBP14.77□□□□□ -0.05
LIME1-208ENST00000493265 OR4A8P0C604 315 aa14.77□□□□□ -0.05
LIME1-208ENST00000493265 GCH1P30793 250 aa14.77□□□□□ -0.05
LIME1-208ENST00000493265 GLRXP35754 106 aa14.77□□□□□ -0.05
LIME1-208ENST00000493265 ZNF92Q03936 586 aa14.77□□□□□ -0.05
LIME1-208ENST00000493265 ALKBH1Q13686 389 aaKnown RBP14.77□□□□□ -0.05
LIME1-208ENST00000493265 SPHARQ15513 63 aa14.77□□□□□ -0.05
LIME1-208ENST00000493265 MSMPQ1L6U9 139 aa14.77□□□□□ -0.05
LIME1-208ENST00000493265 ZNF718Q3SXZ3 478 aa14.77□□□□□ -0.05
LIME1-208ENST00000493265 MRPL21Q7Z2W9 205 aaKnown RBP14.77□□□□□ -0.05
LIME1-208ENST00000493265 LRP11Q86VZ4 500 aa14.77□□□□□ -0.05
LIME1-208ENST00000493265 ZNF485Q8NCK3 441 aa14.77□□□□□ -0.05
LIME1-208ENST00000493265 OR51E1Q8TCB6 317 aa14.77□□□□□ -0.05
LIME1-208ENST00000493265 TMEM171Q8WVE6 324 aa14.77□□□□□ -0.05
LIME1-208ENST00000493265 SGK3Q96BR1 496 aa14.77□□□□□ -0.05
LIME1-208ENST00000493265 CMBLQ96DG6 245 aa14.77□□□□□ -0.05
LIME1-208ENST00000493265 ZNF696Q9H7X3 374 aa14.77□□□□□ -0.05
LIME1-208ENST00000493265 MOB1AQ9H8S9 216 aa14.77□□□□□ -0.05
LIME1-208ENST00000493265 ACOT13Q9NPJ3 140 aa14.77□□□□□ -0.05
LIME1-208ENST00000493265 NUFIP1Q9UHK0 495 aaKnown RBP14.77□□□□□ -0.05
LIME1-208ENST00000493265 LSM2Q9Y333 95 aaKnown RBP14.77□□□□□ -0.05
LIME1-208ENST00000493265 CMAHPQ9Y471 501 aa14.77□□□□□ -0.05
LIME1-208ENST00000493265 SIRT4Q9Y6E7 314 aaPredicted RBP14.77□□□□□ -0.05
LIME1-208ENST00000493265 A0A087WXM4 84 aa14.76□□□□□ -0.05
LIME1-208ENST00000493265 ACOD1A6NK06 481 aa14.76□□□□□ -0.05
LIME1-208ENST00000493265 VSTM5A8MXK1 200 aa14.76□□□□□ -0.05
LIME1-208ENST00000493265 XRCC2O43543 280 aa14.76□□□□□ -0.05
LIME1-208ENST00000493265 ICMTO60725 284 aa14.76□□□□□ -0.05
LIME1-208ENST00000493265 GOSR1O95249 250 aa14.76□□□□□ -0.05
LIME1-208ENST00000493265 CLPTM1O96005 669 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms