RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 GNB2P62879 340 aa9.64□□□□□ -0.87
CCM2-213ENST00000480658 ACTG1P63261 375 aa9.64□□□□□ -0.87
CCM2-213ENST00000480658 LCN2P80188 198 aa9.64□□□□□ -0.87
CCM2-213ENST00000480658 HLXQ14774 488 aaPredicted RBP9.64□□□□□ -0.87
CCM2-213ENST00000480658 ZMYND11Q15326 602 aa9.64□□□□□ -0.87
CCM2-213ENST00000480658 DCDC5Q6ZRR9 648 aa9.64□□□□□ -0.87
CCM2-213ENST00000480658 DCXRQ7Z4W1 244 aa9.64□□□□□ -0.87
CCM2-213ENST00000480658 LINC00346Q8IVM7 164 aa9.64□□□□□ -0.87
CCM2-213ENST00000480658 OR5AS1Q8N127 324 aa9.64□□□□□ -0.87
CCM2-213ENST00000480658 SLC37A3Q8NCC5 494 aa9.64□□□□□ -0.87
CCM2-213ENST00000480658 BHLHE23Q8NDY6 225 aa9.64□□□□□ -0.87
CCM2-213ENST00000480658 SEMA6DQ8NFY4 1073 aa9.64□□□□□ -0.87
CCM2-213ENST00000480658 OR10G2Q8NGC3 310 aa9.64□□□□□ -0.87
CCM2-213ENST00000480658 OR6K6Q8NGW6 343 aa9.64□□□□□ -0.87
CCM2-213ENST00000480658 GIPC3Q8TF64 312 aa9.64□□□□□ -0.87
CCM2-213ENST00000480658 NEIL1Q96FI4 390 aaPredicted RBP9.64□□□□□ -0.87
CCM2-213ENST00000480658 KCNJ15Q99712 375 aa9.64□□□□□ -0.87
CCM2-213ENST00000480658 ADAT1Q9BUB4 502 aaKnown RBP9.64□□□□□ -0.87
CCM2-213ENST00000480658 POFUT1Q9H488 388 aa9.64□□□□□ -0.87
CCM2-213ENST00000480658 PPIAL4AQ9Y536 164 aa9.64□□□□□ -0.87
CCM2-213ENST00000480658 AUP1Q9Y679 476 aa9.64□□□□□ -0.87
CCM2-213ENST00000480658 DHRS12A0PJE2 317 aa9.63□□□□□ -0.87
CCM2-213ENST00000480658 ANKRD30BLA7E2S9 258 aa9.63□□□□□ -0.87
CCM2-213ENST00000480658 CEACAM18A8MTB9 384 aa9.63□□□□□ -0.87
CCM2-213ENST00000480658 PRODHO43272 600 aa9.63□□□□□ -0.87
CCM2-213ENST00000480658 E2F6O75461 281 aa9.63□□□□□ -0.87
CCM2-213ENST00000480658 HMGN1P05114 100 aa9.63□□□□□ -0.87
CCM2-213ENST00000480658 LIPFP07098 398 aa9.63□□□□□ -0.87
CCM2-213ENST00000480658 ZNF12P17014 697 aa9.63□□□□□ -0.87
CCM2-213ENST00000480658 SPI1P17947 270 aa9.63□□□□□ -0.87
CCM2-213ENST00000480658 RASSF2P50749 326 aa9.63□□□□□ -0.87
CCM2-213ENST00000480658 GYS2P54840 703 aa9.63□□□□□ -0.87
CCM2-213ENST00000480658 ZNF154Q13106 437 aa9.63□□□□□ -0.87
CCM2-213ENST00000480658 CRMP1Q14194 572 aa9.63□□□□□ -0.87
CCM2-213ENST00000480658 OR8G1Q15617 311 aa9.63□□□□□ -0.87
CCM2-213ENST00000480658 ZNF404Q494X3 552 aa9.63□□□□□ -0.87
CCM2-213ENST00000480658 CD276Q5ZPR3 534 aa9.63□□□□□ -0.87
CCM2-213ENST00000480658 C12orf54Q6X4T0 127 aa9.63□□□□□ -0.87
CCM2-213ENST00000480658 ZNF454Q8N9F8 522 aa9.63□□□□□ -0.87
CCM2-213ENST00000480658 SLCO4A1Q96BD0 722 aa9.63□□□□□ -0.87
CCM2-213ENST00000480658 CCDC124Q96CT7 223 aaKnown RBP9.63□□□□□ -0.87
CCM2-213ENST00000480658 SLAMF6Q96DU3 332 aa9.63□□□□□ -0.87
CCM2-213ENST00000480658 MAP6Q96JE9 813 aa9.63□□□□□ -0.87
CCM2-213ENST00000480658 INTS14Q96SY0 518 aa9.63□□□□□ -0.87
CCM2-213ENST00000480658 PLA2G12AQ9BZM1 189 aa9.63□□□□□ -0.87
CCM2-213ENST00000480658 NMNAT2Q9BZQ4 307 aa9.63□□□□□ -0.87
CCM2-213ENST00000480658 FN3KQ9H479 309 aa9.63□□□□□ -0.87
CCM2-213ENST00000480658 NIPAL2Q9H841 368 aa9.63□□□□□ -0.87
CCM2-213ENST00000480658 MRPL22Q9NWU5 206 aaKnown RBP9.63□□□□□ -0.87
CCM2-213ENST00000480658 CLN8Q9UBY8 286 aa9.63□□□□□ -0.87
CCM2-213ENST00000480658 ENOPH1Q9UHY7 261 aa9.63□□□□□ -0.87
CCM2-213ENST00000480658 NUP50Q9UKX7 468 aa9.63□□□□□ -0.87
CCM2-213ENST00000480658 INSIG2Q9Y5U4 225 aa9.63□□□□□ -0.87
CCM2-213ENST00000480658 U3KQV3 271 aa9.63□□□□□ -0.87
CCM2-213ENST00000480658 CD300LBA8K4G0 201 aa9.62□□□□□ -0.87
CCM2-213ENST00000480658 F5H5P2 479 aa9.62□□□□□ -0.87
CCM2-213ENST00000480658 ZNF593O00488 134 aaPredicted RBP9.62□□□□□ -0.87
CCM2-213ENST00000480658 GYG2O15488 501 aa9.62□□□□□ -0.87
CCM2-213ENST00000480658 MLNRO43193 412 aa9.62□□□□□ -0.87
CCM2-213ENST00000480658 PTBP3O95758 552 aaKnown RBP9.62□□□□□ -0.87
CCM2-213ENST00000480658 GPANK1O95872 356 aa9.62□□□□□ -0.87
CCM2-213ENST00000480658 ANXA8P13928 327 aa9.62□□□□□ -0.87
CCM2-213ENST00000480658 MTNR1AP48039 350 aa9.62□□□□□ -0.87
CCM2-213ENST00000480658 COMPP49747 757 aaPredicted RBP9.62□□□□□ -0.87
CCM2-213ENST00000480658 FLOT2Q14254 428 aa9.62□□□□□ -0.87
CCM2-213ENST00000480658 TIGD6Q17RP2 521 aa9.62□□□□□ -0.87
CCM2-213ENST00000480658 SLC35D3Q5M8T2 416 aa9.62□□□□□ -0.87
CCM2-213ENST00000480658 TRPM8Q7Z2W7 1104 aa9.62□□□□□ -0.87
CCM2-213ENST00000480658 MOGAT3Q86VF5 341 aa9.62□□□□□ -0.87
CCM2-213ENST00000480658 CYB561A3Q8NBI2 242 aa9.62□□□□□ -0.87
CCM2-213ENST00000480658 CSNK2A3Q8NEV1 391 aa9.62□□□□□ -0.87
CCM2-213ENST00000480658 DDOQ99489 341 aa9.62□□□□□ -0.87
CCM2-213ENST00000480658 CHID1Q9BWS9 393 aa9.62□□□□□ -0.87
CCM2-213ENST00000480658 RNF7Q9UBF6 113 aa9.62□□□□□ -0.87
CCM2-213ENST00000480658 TRAV38-1A0A0B4J264 116 aa9.61□□□□□ -0.87
CCM2-213ENST00000480658 PRR23D1E9PI22 279 aaPredicted RBP9.61□□□□□ -0.87
CCM2-213ENST00000480658 ENSAO43768 121 aaKnown RBP9.61□□□□□ -0.87
CCM2-213ENST00000480658 GLCEO94923 617 aa9.61□□□□□ -0.87
CCM2-213ENST00000480658 SOX14O95416 240 aa9.61□□□□□ -0.87
CCM2-213ENST00000480658 FSHBP01225 129 aa9.61□□□□□ -0.87
CCM2-213ENST00000480658 WNT2P09544 360 aa9.61□□□□□ -0.87
CCM2-213ENST00000480658 PRR23D2P0DMB1 279 aaPredicted RBP9.61□□□□□ -0.87
CCM2-213ENST00000480658 GSTT1P30711 240 aa9.61□□□□□ -0.87
CCM2-213ENST00000480658 PYCR1P32322 319 aa9.61□□□□□ -0.87
CCM2-213ENST00000480658 GNALP38405 381 aa9.61□□□□□ -0.87
CCM2-213ENST00000480658 PITPNBP48739 271 aa9.61□□□□□ -0.87
CCM2-213ENST00000480658 ERFP50548 548 aa9.61□□□□□ -0.87
CCM2-213ENST00000480658 EIF2B1Q14232 305 aaKnown RBP9.61□□□□□ -0.87
CCM2-213ENST00000480658 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.61□□□□□ -0.87
CCM2-213ENST00000480658 DEFB108BQ8NET1 73 aa9.61□□□□□ -0.87
CCM2-213ENST00000480658 OR8D4Q8NGM9 314 aa9.61□□□□□ -0.87
CCM2-213ENST00000480658 OR9Q1Q8NGQ5 310 aa9.61□□□□□ -0.87
CCM2-213ENST00000480658 OR8S1Q8NH09 359 aa9.61□□□□□ -0.87
CCM2-213ENST00000480658 RNF133Q8WVZ7 376 aa9.61□□□□□ -0.87
CCM2-213ENST00000480658 GCDHQ92947 438 aaPredicted RBP9.61□□□□□ -0.87
CCM2-213ENST00000480658 SPSB4Q96A44 273 aa9.61□□□□□ -0.87
CCM2-213ENST00000480658 NRBF2Q96F24 287 aa9.61□□□□□ -0.87
CCM2-213ENST00000480658 DMRTB1Q96MA1 342 aa9.61□□□□□ -0.87
CCM2-213ENST00000480658 FEVQ99581 238 aa9.61□□□□□ -0.87
CCM2-213ENST00000480658 THTPAQ9BU02 230 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms