RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 OR51G2Q8NGK0 314 aa17.44■□□□□ 0.38
VARS-224ENST00000479051 OR13G1Q8NGZ3 307 aa17.44■□□□□ 0.38
VARS-224ENST00000479051 ELMOD3Q96FG2 381 aa17.44■□□□□ 0.38
VARS-224ENST00000479051 PGAM5Q96HS1 289 aa17.44■□□□□ 0.38
VARS-224ENST00000479051 CLN6Q9NWW5 311 aa17.44■□□□□ 0.38
VARS-224ENST00000479051 IKZF2Q9UKS7 526 aa17.44■□□□□ 0.38
VARS-224ENST00000479051 LOC100130705A0A1B0GUX0 176 aa17.43■□□□□ 0.38
VARS-224ENST00000479051 GGT3PA6NGU5 568 aa17.43■□□□□ 0.38
VARS-224ENST00000479051 E9PQ18 207 aa17.43■□□□□ 0.38
VARS-224ENST00000479051 CD55P08174 381 aa17.43■□□□□ 0.38
VARS-224ENST00000479051 GIFP27352 417 aa17.43■□□□□ 0.38
VARS-224ENST00000479051 PSMA6P60900 246 aaKnown RBP17.43■□□□□ 0.38
VARS-224ENST00000479051 ELF3P78545 371 aaPredicted RBP17.43■□□□□ 0.38
VARS-224ENST00000479051 TNFAIP6P98066 277 aaPredicted RBP17.43■□□□□ 0.38
VARS-224ENST00000479051 GLYATL3Q5SZD4 288 aa17.43■□□□□ 0.38
VARS-224ENST00000479051 FAM57BQ71RH2 274 aa17.43■□□□□ 0.38
VARS-224ENST00000479051 ZNF679Q8IYX0 411 aa17.43■□□□□ 0.38
VARS-224ENST00000479051 Q96MT0 163 aa17.43■□□□□ 0.38
VARS-224ENST00000479051 OR8B4Q96RC9 309 aa17.43■□□□□ 0.38
VARS-224ENST00000479051 APOL4Q9BPW4 351 aa17.43■□□□□ 0.38
VARS-224ENST00000479051 REPIN1Q9BWE0 567 aaKnown RBP17.43■□□□□ 0.38
VARS-224ENST00000479051 VCXQ9H320 206 aa17.43■□□□□ 0.38
VARS-224ENST00000479051 BRD7Q9NPI1 651 aa17.43■□□□□ 0.38
VARS-224ENST00000479051 TMEM100Q9NV29 134 aa17.43■□□□□ 0.38
VARS-224ENST00000479051 FAM118AQ9NWS6 357 aa17.43■□□□□ 0.38
VARS-224ENST00000479051 NOP16Q9Y3C1 178 aaKnown RBP17.43■□□□□ 0.38
VARS-224ENST00000479051 LRP12Q9Y561 859 aa17.43■□□□□ 0.38
VARS-224ENST00000479051 IGHV1-69-2A0A0G2JMI3 117 aa17.42■□□□□ 0.38
VARS-224ENST00000479051 LYNX1G3V0Z9 82 aa17.42■□□□□ 0.38
VARS-224ENST00000479051 LYNX1P0DP58 116 aa17.42■□□□□ 0.38
VARS-224ENST00000479051 TNFRSF1AP19438 455 aa17.42■□□□□ 0.38
VARS-224ENST00000479051 USF1P22415 310 aaPredicted RBP17.42■□□□□ 0.38
VARS-224ENST00000479051 PEX2P28328 305 aa17.42■□□□□ 0.38
VARS-224ENST00000479051 CRYBB2P43320 205 aa17.42■□□□□ 0.38
VARS-224ENST00000479051 RIDAP52758 137 aaKnown RBP17.42■□□□□ 0.38
VARS-224ENST00000479051 CXCR4P61073 352 aa17.42■□□□□ 0.38
VARS-224ENST00000479051 ROM1Q03395 351 aa17.42■□□□□ 0.38
VARS-224ENST00000479051 ZNF92Q03936 586 aa17.42■□□□□ 0.38
VARS-224ENST00000479051 LOXL1Q08397 574 aaPredicted RBP17.42■□□□□ 0.38
VARS-224ENST00000479051 OCLNQ16625 522 aa17.42■□□□□ 0.38
VARS-224ENST00000479051 HFEQ30201 348 aa17.42■□□□□ 0.38
VARS-224ENST00000479051 LPCAT4Q643R3 524 aa17.42■□□□□ 0.38
VARS-224ENST00000479051 ZNF322Q6U7Q0 402 aaPredicted RBP17.42■□□□□ 0.38
VARS-224ENST00000479051 BHLHE23Q8NDY6 225 aa17.42■□□□□ 0.38
VARS-224ENST00000479051 OR2AE1Q8NHA4 323 aa17.42■□□□□ 0.38
VARS-224ENST00000479051 BPESC1Q9GZL8 116 aa17.42■□□□□ 0.38
VARS-224ENST00000479051 SLC22A4Q9H015 551 aa17.42■□□□□ 0.38
VARS-224ENST00000479051 RGCCQ9H4X1 137 aa17.42■□□□□ 0.38
VARS-224ENST00000479051 COPS3Q9UNS2 423 aa17.42■□□□□ 0.38
VARS-224ENST00000479051 CD300LBA8K4G0 201 aa17.41■□□□□ 0.38
VARS-224ENST00000479051 VWC2LB2RUY7 222 aa17.41■□□□□ 0.38
VARS-224ENST00000479051 SLC16A6O15403 523 aa17.41■□□□□ 0.38
VARS-224ENST00000479051 CDC14BO60729 498 aa17.41■□□□□ 0.38
VARS-224ENST00000479051 OR2T7P0C7T2 308 aa17.41■□□□□ 0.38
VARS-224ENST00000479051 COL8A2P25067 703 aa17.41■□□□□ 0.38
VARS-224ENST00000479051 DCTDP32321 178 aa17.41■□□□□ 0.38
VARS-224ENST00000479051 TMEM33P57088 247 aa17.41■□□□□ 0.38
VARS-224ENST00000479051 EGR3Q06889 387 aa17.41■□□□□ 0.38
VARS-224ENST00000479051 ZNF829Q3KNS6 432 aaPredicted RBP17.41■□□□□ 0.38
VARS-224ENST00000479051 Q6ZR03 302 aa17.41■□□□□ 0.38
VARS-224ENST00000479051 MAPK1IP1LQ8NDC0 245 aa17.41■□□□□ 0.38
VARS-224ENST00000479051 OR2T27Q8NH04 317 aa17.41■□□□□ 0.38
VARS-224ENST00000479051 UBE2FQ969M7 185 aa17.41■□□□□ 0.38
VARS-224ENST00000479051 SPSB4Q96A44 273 aa17.41■□□□□ 0.38
VARS-224ENST00000479051 REEP6Q96HR9 211 aa17.41■□□□□ 0.38
VARS-224ENST00000479051 SLC30A2Q9BRI3 323 aa17.41■□□□□ 0.38
VARS-224ENST00000479051 IL19Q9UHD0 177 aa17.41■□□□□ 0.38
VARS-224ENST00000479051 CHD3Q12873 2000 aaKnown RBP17.41■□□□□ 0.38
VARS-224ENST00000479051 VPS13CQ709C8 3753 aa17.41■□□□□ 0.38
VARS-224ENST00000479051 ACANP16112 2415 aa17.4■□□□□ 0.38
VARS-224ENST00000479051 ACOD1A6NK06 481 aa17.4■□□□□ 0.38
VARS-224ENST00000479051 H0YHG0 523 aa17.4■□□□□ 0.38
VARS-224ENST00000479051 CASQ2O14958 399 aaPredicted RBP17.4■□□□□ 0.38
VARS-224ENST00000479051 ENTPD6O75354 484 aa17.4■□□□□ 0.38
VARS-224ENST00000479051 DDOSTP39656 456 aa17.4■□□□□ 0.38
VARS-224ENST00000479051 GPR6P46095 362 aaPredicted RBP17.4■□□□□ 0.38
VARS-224ENST00000479051 MTNR1AP48039 350 aa17.4■□□□□ 0.38
VARS-224ENST00000479051 SLC3A1Q07837 685 aa17.4■□□□□ 0.38
VARS-224ENST00000479051 RIN1Q13671 783 aa17.4■□□□□ 0.38
VARS-224ENST00000479051 SNCBQ16143 134 aa17.4■□□□□ 0.38
VARS-224ENST00000479051 TTC23Q5W5X9 447 aa17.4■□□□□ 0.38
VARS-224ENST00000479051 CLEC9AQ6UXN8 241 aa17.4■□□□□ 0.38
VARS-224ENST00000479051 PRSS45Q7RTY3 260 aa17.4■□□□□ 0.38
VARS-224ENST00000479051 OR10H4Q8NGA5 316 aa17.4■□□□□ 0.38
VARS-224ENST00000479051 YIPF5Q969M3 257 aa17.4■□□□□ 0.38
VARS-224ENST00000479051 TTTY10Q9BZA0 68 aa17.4■□□□□ 0.38
VARS-224ENST00000479051 ZNF275Q9NSD4 429 aaPredicted RBP17.4■□□□□ 0.38
VARS-224ENST00000479051 ZNF391Q9UJN7 358 aa17.4■□□□□ 0.38
VARS-224ENST00000479051 TMEM269A0A1B0GVZ9 245 aa17.39■□□□□ 0.37
VARS-224ENST00000479051 PSMD9O00233 223 aa17.39■□□□□ 0.37
VARS-224ENST00000479051 PPIHO43447 177 aaKnown RBP17.39■□□□□ 0.37
VARS-224ENST00000479051 KRT8P05787 483 aa17.39■□□□□ 0.37
VARS-224ENST00000479051 SRP9P49458 86 aaKnown RBP17.39■□□□□ 0.37
VARS-224ENST00000479051 GFOD2Q3B7J2 385 aa17.39■□□□□ 0.37
VARS-224ENST00000479051 OGFRL1Q5TC84 451 aaPredicted RBP17.39■□□□□ 0.37
VARS-224ENST00000479051 ENTHD1Q8IYW4 607 aa17.39■□□□□ 0.37
VARS-224ENST00000479051 CYGBQ8WWM9 190 aa17.39■□□□□ 0.37
VARS-224ENST00000479051 TIMD4Q96H15 378 aa17.39■□□□□ 0.37
VARS-224ENST00000479051 TBX5Q99593 518 aa17.39■□□□□ 0.37
VARS-224ENST00000479051 MRPL15Q9P015 296 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms