RNA–Protein interactions for RNA: ENST00000478644.1

HOXB3-209, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 398 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-209ENST00000478644 MSI2Q96DH6 328 aaKnown RBP5.39□□□□□ -1.55
HOXB3-209ENST00000478644 BPIFA2Q96DR5 249 aa5.39□□□□□ -1.55
HOXB3-209ENST00000478644 ZMYND19Q96E35 227 aaPredicted RBP5.39□□□□□ -1.55
HOXB3-209ENST00000478644 TIMD4Q96H15 378 aa5.39□□□□□ -1.55
HOXB3-209ENST00000478644 PGAM5Q96HS1 289 aa5.39□□□□□ -1.55
HOXB3-209ENST00000478644 TXNDC15Q96J42 360 aa5.39□□□□□ -1.55
HOXB3-209ENST00000478644 NSMCE2Q96MF7 247 aa5.39□□□□□ -1.55
HOXB3-209ENST00000478644 SEPHS2Q99611 448 aa5.39□□□□□ -1.55
HOXB3-209ENST00000478644 SIAEQ9HAT2 523 aa5.39□□□□□ -1.55
HOXB3-209ENST00000478644 NOX3Q9HBY0 568 aa5.39□□□□□ -1.55
HOXB3-209ENST00000478644 IL1RAPQ9NPH3 570 aa5.39□□□□□ -1.55
HOXB3-209ENST00000478644 C20orf141Q9NUB4 165 aa5.39□□□□□ -1.55
HOXB3-209ENST00000478644 DNAJB11Q9UBS4 358 aa5.39□□□□□ -1.55
HOXB3-209ENST00000478644 PRPF19Q9UMS4 504 aaKnown RBP5.39□□□□□ -1.55
HOXB3-209ENST00000478644 FAM32AQ9Y421 112 aaKnown RBP5.39□□□□□ -1.55
HOXB3-209ENST00000478644 COX11Q9Y6N1 276 aa5.39□□□□□ -1.55
HOXB3-209ENST00000478644 JMJD1CQ15652 2540 aa5.39□□□□□ -1.55
HOXB3-209ENST00000478644 ROS1P08922 2347 aa5.39□□□□□ -1.55
HOXB3-209ENST00000478644 UNC119BA6NIH7 251 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 FAM90A7PA6NKC0 464 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 FAM90A22PA8MWA6 464 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 FAM90A12PA8MX19 464 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 FAM90A23PA8MXZ1 464 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 BLOC1S5-TXNDC5H3BN57 136 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 IFNL4K9M1U5 179 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 CTDSP2O14595 271 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 H1F0P07305 194 aaKnown RBP5.38□□□□□ -1.55
HOXB3-209ENST00000478644 ADRA2AP08913 450 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 CCDC159P0C7I6 412 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 UMPSP11172 480 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 IFI30P13284 250 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 ZNF250P15622 560 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 PTNP21246 168 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 CALCRP30988 508 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 APLNRP35414 380 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 AQP2P41181 271 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 SLC9A3P48764 834 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 NPY4RP50391 375 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 ARHGDIAP52565 204 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 ZNF133P52736 654 aaPredicted RBP5.38□□□□□ -1.55
HOXB3-209ENST00000478644 KLF3P57682 345 aaPredicted RBP5.38□□□□□ -1.55
HOXB3-209ENST00000478644 MYBPC1Q00872 1141 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 RPL18Q07020 188 aaKnown RBP5.38□□□□□ -1.55
HOXB3-209ENST00000478644 LGALS3BPQ08380 585 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 TRAP1Q12931 704 aaKnown RBP5.38□□□□□ -1.55
HOXB3-209ENST00000478644 NPRL3Q12980 569 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 FHL1Q13642 323 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 HIST3H3Q16695 136 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 THEM4Q5T1C6 240 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 CST9LP1Q5W188 147 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 LCN8Q6JVE9 175 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 TBPL2Q6SJ96 375 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 ZNF730Q6ZMV8 503 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 SLC16A14Q7RTX9 510 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 NANOGNBQ7Z5D8 188 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 DHFR2Q86XF0 187 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 WDFY1Q8IWB7 410 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 NRMQ8IXM6 262 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 FAM86B1Q8N7N1 296 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 TMEM116Q8NCL8 245 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 SLC30A7Q8NEW0 376 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 OR51F2Q8NH61 342 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 SYNPRQ8TBG9 265 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 SLC7A13Q8TCU3 470 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 ZNF418Q8TF45 676 aaPredicted RBP5.38□□□□□ -1.55
HOXB3-209ENST00000478644 RAB1CQ92928 201 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 MCUR1Q96AQ8 359 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 RBP7Q96R05 134 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 ZNF347Q96SE7 839 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 EMC6Q9BV81 110 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 MRPL13Q9BYD1 178 aaKnown RBP5.38□□□□□ -1.55
HOXB3-209ENST00000478644 BPESC1Q9GZL8 116 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 EGLN1Q9GZT9 426 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 RNF121Q9H920 327 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 ELOVL3Q9HB03 270 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 CDH20Q9HBT6 801 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 INIPQ9NRY2 104 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 MED29Q9NX70 200 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 TAS2R3Q9NYW6 316 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 RHCGQ9UBD6 479 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 EXTL2Q9UBQ6 330 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 IL19Q9UHD0 177 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 SLC23A1Q9UHI7 598 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 LAMP5Q9UJQ1 280 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 FBN3Q75N90 2809 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 COL6A5A8TX70 2615 aa5.38□□□□□ -1.55
HOXB3-209ENST00000478644 HEATR1Q9H583 2144 aaKnown RBP5.38□□□□□ -1.55
HOXB3-209ENST00000478644 IGLV3-9A0A075B6K5 115 aa5.37□□□□□ -1.55
HOXB3-209ENST00000478644 PPIAL4EA0A075B759 164 aa5.37□□□□□ -1.55
HOXB3-209ENST00000478644 PPIAL4CA0A0B4J2A2 164 aa5.37□□□□□ -1.55
HOXB3-209ENST00000478644 IGHV4-61A0A0C4DH41 118 aa5.37□□□□□ -1.55
HOXB3-209ENST00000478644 A0A1W2PPW3 197 aa5.37□□□□□ -1.55
HOXB3-209ENST00000478644 TMEM129A0AVI4 362 aa5.37□□□□□ -1.55
HOXB3-209ENST00000478644 PLSCR5A0PG75 271 aa5.37□□□□□ -1.55
HOXB3-209ENST00000478644 A6NIZ1 184 aa5.37□□□□□ -1.55
HOXB3-209ENST00000478644 EFCAB9A8MZ26 197 aa5.37□□□□□ -1.55
HOXB3-209ENST00000478644 MCIDASD6RGH6 385 aa5.37□□□□□ -1.55
HOXB3-209ENST00000478644 C11orf98E9PRG8 122 aa5.37□□□□□ -1.55
HOXB3-209ENST00000478644 PPIAL4DF5H284 164 aa5.37□□□□□ -1.55
HOXB3-209ENST00000478644 CDC42EP2O14613 210 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms