RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 EBF4Q9BQW3 602 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 TIMM29Q9BSF4 260 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 FRMD8P1Q9BZ68 369 aaPredicted RBP2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 TCEAL2Q9H3H9 227 aaPredicted RBP2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 UCK1Q9HA47 277 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 ASCL3Q9NQ33 180 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 BFARQ9NZS9 450 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 KIF25Q9UIL4 384 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 BTNL2Q9UIR0 455 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 TMCO1Q9UM00 188 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 IFT52Q9Y366 437 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 HEY1Q9Y5J3 304 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 MN1Q10571 1320 aaPredicted RBP2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 WDFY3Q8IZQ1 3526 aa2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 DSPP15924 2871 aaKnown RBP2.82□□□□□ -1.96
CDC42BPA-212ENST00000478573 SHANK1Q9Y566 2161 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 IGSF10Q6WRI0 2623 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 SPEGQ15772 3267 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 LOC285095A0A1B0GVY8 99 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 KCNK1O00180 336 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 HSD17B6O14756 317 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 KMOO15229 486 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 HDAC3O15379 428 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 RRP8O43159 456 aaKnown RBP2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 SHOX2O60902 331 aaPredicted RBP2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 ZNF780AO75290 641 aaPredicted RBP2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 SERPINA3P01011 423 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 RBMY1CP0DJD4 496 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 THRAP10827 490 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 LIPCP11150 499 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 NCF2P19878 526 aaPredicted RBP2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 ZBTB25P24278 435 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 SHMT2P34897 504 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 ACTR1BP42025 376 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 MARCKSL1P49006 195 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 DYNLT1P63172 113 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 UBE2IP63279 158 aaKnown RBP2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 CKAP4Q07065 602 aaKnown RBP2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 ZNF763Q0D2J5 394 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 BST1Q10588 318 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 PRPSAP1Q14558 356 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 IHHQ14623 411 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 OXA1LQ15070 435 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 TAF1AQ15573 450 aaPredicted RBP2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 DGUOKQ16854 277 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 MICBQ29980 383 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 BCL7AQ4VC05 210 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 PYCR3Q53H96 274 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 HSP90B2PQ58FF3 399 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 SAMD4BQ5PRF9 694 aaKnown RBP2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 FHL5Q5TD97 284 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 C1orf146Q5VVC0 180 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 ZNF544Q6NX49 715 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 ENPP6Q6UWR7 440 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 ZYG11AQ6WRX3 759 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 HSDL2Q6YN16 418 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 KDM7AQ6ZMT4 941 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 UTS2BQ765I0 119 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 TAS2R42Q7RTR8 314 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 PRSS41Q7RTY9 318 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 GLT6D1Q7Z4J2 308 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 ZNF100Q8IYN0 542 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 ZNF567Q8N184 647 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 RNF10Q8N5U6 811 aaKnown RBP2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 NKAPP1Q8N9T2 125 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 OR10G3Q8NGC4 313 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 OR4K14Q8NGD5 310 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 OR51S1Q8NGJ8 323 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 LINC01006Q8NI28 216 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 ACTL9Q8TC94 416 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 SLC37A2Q8TED4 501 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 FGF11Q92914 225 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 PEX13Q92968 403 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 TUBGCP3Q96CW5 907 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 ZNF514Q96K75 400 aaPredicted RBP2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 ZIM3Q96PE6 472 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 TECTBQ96PL2 329 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 CHRDL1Q9BU40 450 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 YTHDF1Q9BYJ9 559 aaKnown RBP2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 PKIBQ9C010 78 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 C20orf85Q9H1P6 137 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 ANKRD19PQ9H560 264 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 METTL7AQ9H8H3 244 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 MRPL40Q9NQ50 206 aaKnown RBP2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 IL17CQ9P0M4 197 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 V9GY05 133 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 ARHGAP21Q5T5U3 1957 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 NBEAQ8NFP9 2946 aa2.81□□□□□ -1.96
CDC42BPA-212ENST00000478573 ZFYVE26Q68DK2 2539 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 SCN3AQ9NY46 2000 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 IGLV3-16A0A075B6K0 115 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 PPIAL4EA0A075B759 164 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 GLYATL1P3A0A0U1RQE8 302 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 A0A1W2PPV9 198 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 CTAGE15A4D2H0 777 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 H7C0C1 242 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 AP3B1O00203 1094 aa2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 NVLO15381 856 aaKnown RBP2.8□□□□□ -1.96
CDC42BPA-212ENST00000478573 TOX3O15405 576 aaPredicted RBP2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms