RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 ZNF121P58317 390 aaPredicted RBP12.1□□□□□ -0.47
BRCA1-211ENST00000472490 EGR3Q06889 387 aa12.1□□□□□ -0.47
BRCA1-211ENST00000472490 CDK5R2Q13319 367 aa12.1□□□□□ -0.47
BRCA1-211ENST00000472490 SNCBQ16143 134 aa12.1□□□□□ -0.47
BRCA1-211ENST00000472490 TSTQ16762 297 aaKnown RBP12.1□□□□□ -0.47
BRCA1-211ENST00000472490 TIGD6Q17RP2 521 aa12.1□□□□□ -0.47
BRCA1-211ENST00000472490 TTC23Q5W5X9 447 aa12.1□□□□□ -0.47
BRCA1-211ENST00000472490 OR2T2Q6IF00 324 aa12.1□□□□□ -0.47
BRCA1-211ENST00000472490 LRRN1Q6UXK5 716 aa12.1□□□□□ -0.47
BRCA1-211ENST00000472490 FTMTQ8N4E7 242 aa12.1□□□□□ -0.47
BRCA1-211ENST00000472490 OR2Z1Q8NG97 314 aa12.1□□□□□ -0.47
BRCA1-211ENST00000472490 OR2T27Q8NH04 317 aa12.1□□□□□ -0.47
BRCA1-211ENST00000472490 ELMOD3Q96FG2 381 aa12.1□□□□□ -0.47
BRCA1-211ENST00000472490 PGAM5Q96HS1 289 aa12.1□□□□□ -0.47
BRCA1-211ENST00000472490 AMELYQ99218 206 aa12.1□□□□□ -0.47
BRCA1-211ENST00000472490 MYCBPQ99417 103 aaPredicted RBP12.1□□□□□ -0.47
BRCA1-211ENST00000472490 MSL2Q9HCI7 577 aa12.1□□□□□ -0.47
BRCA1-211ENST00000472490 TMEM100Q9NV29 134 aa12.1□□□□□ -0.47
BRCA1-211ENST00000472490 DNAJC27Q9NZQ0 273 aa12.1□□□□□ -0.47
BRCA1-211ENST00000472490 ZNF391Q9UJN7 358 aa12.1□□□□□ -0.47
BRCA1-211ENST00000472490 IKZF2Q9UKS7 526 aa12.1□□□□□ -0.47
BRCA1-211ENST00000472490 LRP12Q9Y561 859 aa12.1□□□□□ -0.47
BRCA1-211ENST00000472490 CCDC168Q8NDH2 2452 aa12.1□□□□□ -0.47
BRCA1-211ENST00000472490 GGT3PA6NGU5 568 aa12.09□□□□□ -0.47
BRCA1-211ENST00000472490 ACOD1A6NK06 481 aa12.09□□□□□ -0.47
BRCA1-211ENST00000472490 CASQ2O14958 399 aaPredicted RBP12.09□□□□□ -0.47
BRCA1-211ENST00000472490 SMAD7O15105 426 aaKnown RBP12.09□□□□□ -0.47
BRCA1-211ENST00000472490 SLC2A1P11166 492 aa12.09□□□□□ -0.47
BRCA1-211ENST00000472490 USF1P22415 310 aaPredicted RBP12.09□□□□□ -0.47
BRCA1-211ENST00000472490 PEX2P28328 305 aa12.09□□□□□ -0.47
BRCA1-211ENST00000472490 CRYBB2P43320 205 aa12.09□□□□□ -0.47
BRCA1-211ENST00000472490 NR4A2P43354 598 aa12.09□□□□□ -0.47
BRCA1-211ENST00000472490 RIDAP52758 137 aaKnown RBP12.09□□□□□ -0.47
BRCA1-211ENST00000472490 HCCSP53701 268 aa12.09□□□□□ -0.47
BRCA1-211ENST00000472490 PSMA6P60900 246 aaKnown RBP12.09□□□□□ -0.47
BRCA1-211ENST00000472490 CXCR4P61073 352 aa12.09□□□□□ -0.47
BRCA1-211ENST00000472490 ACTC1P68032 377 aa12.09□□□□□ -0.47
BRCA1-211ENST00000472490 ACTA1P68133 377 aa12.09□□□□□ -0.47
BRCA1-211ENST00000472490 TNFAIP6P98066 277 aaPredicted RBP12.09□□□□□ -0.47
BRCA1-211ENST00000472490 ZNF92Q03936 586 aa12.09□□□□□ -0.47
BRCA1-211ENST00000472490 HFEQ30201 348 aa12.09□□□□□ -0.47
BRCA1-211ENST00000472490 ZNF829Q3KNS6 432 aaPredicted RBP12.09□□□□□ -0.47
BRCA1-211ENST00000472490 TMEM255AQ5JRV8 349 aa12.09□□□□□ -0.47
BRCA1-211ENST00000472490 GLYATL3Q5SZD4 288 aa12.09□□□□□ -0.47
BRCA1-211ENST00000472490 LPCAT4Q643R3 524 aa12.09□□□□□ -0.47
BRCA1-211ENST00000472490 ZNF322Q6U7Q0 402 aaPredicted RBP12.09□□□□□ -0.47
BRCA1-211ENST00000472490 FAM57BQ71RH2 274 aa12.09□□□□□ -0.47
BRCA1-211ENST00000472490 OR5AS1Q8N127 324 aa12.09□□□□□ -0.47
BRCA1-211ENST00000472490 CIARTQ8N365 385 aaPredicted RBP12.09□□□□□ -0.47
BRCA1-211ENST00000472490 BHLHE23Q8NDY6 225 aa12.09□□□□□ -0.47
BRCA1-211ENST00000472490 ITFG2Q969R8 447 aa12.09□□□□□ -0.47
BRCA1-211ENST00000472490 SPSB4Q96A44 273 aa12.09□□□□□ -0.47
BRCA1-211ENST00000472490 OR8B4Q96RC9 309 aa12.09□□□□□ -0.47
BRCA1-211ENST00000472490 REPIN1Q9BWE0 567 aaKnown RBP12.09□□□□□ -0.47
BRCA1-211ENST00000472490 IL19Q9UHD0 177 aa12.09□□□□□ -0.47
BRCA1-211ENST00000472490 KLHDC2Q9Y2U9 406 aa12.09□□□□□ -0.47
BRCA1-211ENST00000472490 PCDHGB1Q9Y5G3 927 aa12.09□□□□□ -0.47
BRCA1-211ENST00000472490 PRRC2AP48634 2157 aaKnown RBP12.08□□□□□ -0.48
BRCA1-211ENST00000472490 TMEM269A0A1B0GVZ9 245 aa12.08□□□□□ -0.48
BRCA1-211ENST00000472490 CD300LBA8K4G0 201 aa12.08□□□□□ -0.48
BRCA1-211ENST00000472490 ENTPD6O75354 484 aa12.08□□□□□ -0.48
BRCA1-211ENST00000472490 SLC34A1Q06495 639 aa12.08□□□□□ -0.48
BRCA1-211ENST00000472490 SLC3A1Q07837 685 aa12.08□□□□□ -0.48
BRCA1-211ENST00000472490 LOXL1Q08397 574 aaPredicted RBP12.08□□□□□ -0.48
BRCA1-211ENST00000472490 OGFRL1Q5TC84 451 aaPredicted RBP12.08□□□□□ -0.48
BRCA1-211ENST00000472490 PRSS45Q7RTY3 260 aa12.08□□□□□ -0.48
BRCA1-211ENST00000472490 SETD9Q8NE22 299 aa12.08□□□□□ -0.48
BRCA1-211ENST00000472490 OR2AE1Q8NHA4 323 aa12.08□□□□□ -0.48
BRCA1-211ENST00000472490 UBE2FQ969M7 185 aa12.08□□□□□ -0.48
BRCA1-211ENST00000472490 REEP6Q96HR9 211 aa12.08□□□□□ -0.48
BRCA1-211ENST00000472490 SLC30A2Q9BRI3 323 aa12.08□□□□□ -0.48
BRCA1-211ENST00000472490 BPESC1Q9GZL8 116 aa12.08□□□□□ -0.48
BRCA1-211ENST00000472490 BRD7Q9NPI1 651 aa12.08□□□□□ -0.48
BRCA1-211ENST00000472490 MRPL15Q9P015 296 aaKnown RBP12.08□□□□□ -0.48
BRCA1-211ENST00000472490 ANKRD30BLA7E2S9 258 aa12.07□□□□□ -0.48
BRCA1-211ENST00000472490 VWC2LB2RUY7 222 aa12.07□□□□□ -0.48
BRCA1-211ENST00000472490 PSMD9O00233 223 aa12.07□□□□□ -0.48
BRCA1-211ENST00000472490 NCR1O76036 304 aa12.07□□□□□ -0.48
BRCA1-211ENST00000472490 KRT8P05787 483 aa12.07□□□□□ -0.48
BRCA1-211ENST00000472490 HEXAP06865 529 aa12.07□□□□□ -0.48
BRCA1-211ENST00000472490 GPR6P46095 362 aaPredicted RBP12.07□□□□□ -0.48
BRCA1-211ENST00000472490 SRP9P49458 86 aaKnown RBP12.07□□□□□ -0.48
BRCA1-211ENST00000472490 MMP16P51512 607 aa12.07□□□□□ -0.48
BRCA1-211ENST00000472490 MZT1Q08AG7 82 aa12.07□□□□□ -0.48
BRCA1-211ENST00000472490 RIN1Q13671 783 aa12.07□□□□□ -0.48
BRCA1-211ENST00000472490 PEG10Q86TG7 708 aaKnown RBP12.07□□□□□ -0.48
BRCA1-211ENST00000472490 KLBQ86Z14 1044 aa12.07□□□□□ -0.48
BRCA1-211ENST00000472490 ENTHD1Q8IYW4 607 aa12.07□□□□□ -0.48
BRCA1-211ENST00000472490 DHRSXQ8N5I4 330 aa12.07□□□□□ -0.48
BRCA1-211ENST00000472490 OR10H4Q8NGA5 316 aa12.07□□□□□ -0.48
BRCA1-211ENST00000472490 RHOXF1Q8NHV9 184 aa12.07□□□□□ -0.48
BRCA1-211ENST00000472490 GTF3AQ92664 365 aaKnown RBP12.07□□□□□ -0.48
BRCA1-211ENST00000472490 RNFT2Q96EX2 444 aa12.07□□□□□ -0.48
BRCA1-211ENST00000472490 MRPL48Q96GC5 212 aaKnown RBP12.07□□□□□ -0.48
BRCA1-211ENST00000472490 TIMD4Q96H15 378 aa12.07□□□□□ -0.48
BRCA1-211ENST00000472490 MOB1AQ9H8S9 216 aa12.07□□□□□ -0.48
BRCA1-211ENST00000472490 COPS3Q9UNS2 423 aa12.07□□□□□ -0.48
BRCA1-211ENST00000472490 MYO9AB2RTY4 2548 aa12.07□□□□□ -0.48
BRCA1-211ENST00000472490 A0A1W2PQL4 384 aaPredicted RBP12.06□□□□□ -0.48
BRCA1-211ENST00000472490 CLDN25C9JDP6 229 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms