RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 LINC01590Q5TEZ4 76 aa8.56□□□□□ -1.04
SF3A3-204ENST00000462258 LIPNQ5VXI9 398 aa8.56□□□□□ -1.04
SF3A3-204ENST00000462258 SPATC1Q76KD6 591 aa8.56□□□□□ -1.04
SF3A3-204ENST00000462258 C1QL2Q7Z5L3 287 aa8.56□□□□□ -1.04
SF3A3-204ENST00000462258 MOGAT3Q86VF5 341 aa8.56□□□□□ -1.04
SF3A3-204ENST00000462258 ERI1Q8IV48 349 aaKnown RBP8.56□□□□□ -1.04
SF3A3-204ENST00000462258 HS3ST5Q8IZT8 346 aa8.56□□□□□ -1.04
SF3A3-204ENST00000462258 OR6N2Q8NGY6 317 aa8.56□□□□□ -1.04
SF3A3-204ENST00000462258 SPRYD4Q8WW59 207 aaPredicted RBP8.56□□□□□ -1.04
SF3A3-204ENST00000462258 OTULINQ96BN8 352 aa8.56□□□□□ -1.04
SF3A3-204ENST00000462258 INTS14Q96SY0 518 aa8.56□□□□□ -1.04
SF3A3-204ENST00000462258 KCNJ15Q99712 375 aa8.56□□□□□ -1.04
SF3A3-204ENST00000462258 ADAT1Q9BUB4 502 aaKnown RBP8.56□□□□□ -1.04
SF3A3-204ENST00000462258 C19orf24Q9BVV8 132 aa8.56□□□□□ -1.04
SF3A3-204ENST00000462258 REPIN1Q9BWE0 567 aaKnown RBP8.56□□□□□ -1.04
SF3A3-204ENST00000462258 TMPRSS13Q9BYE2 586 aa8.56□□□□□ -1.04
SF3A3-204ENST00000462258 OPA3Q9H6K4 179 aa8.56□□□□□ -1.04
SF3A3-204ENST00000462258 MED20Q9H944 212 aa8.56□□□□□ -1.04
SF3A3-204ENST00000462258 ZNF556Q9HAH1 456 aa8.56□□□□□ -1.04
SF3A3-204ENST00000462258 PATZ1Q9HBE1 687 aaKnown RBP8.56□□□□□ -1.04
SF3A3-204ENST00000462258 CENPMQ9NSP4 180 aa8.56□□□□□ -1.04
SF3A3-204ENST00000462258 TMEM100Q9NV29 134 aa8.56□□□□□ -1.04
SF3A3-204ENST00000462258 ARHGAP32A7KAX9 2087 aa8.56□□□□□ -1.04
SF3A3-204ENST00000462258 LRRC30A6NM36 301 aa8.55□□□□□ -1.04
SF3A3-204ENST00000462258 CD300LBA8K4G0 201 aa8.55□□□□□ -1.04
SF3A3-204ENST00000462258 CEACAM18A8MTB9 384 aa8.55□□□□□ -1.04
SF3A3-204ENST00000462258 A8MXK9 166 aa8.55□□□□□ -1.04
SF3A3-204ENST00000462258 F5H0A9 414 aaPredicted RBP8.55□□□□□ -1.04
SF3A3-204ENST00000462258 GLCEO94923 617 aa8.55□□□□□ -1.04
SF3A3-204ENST00000462258 AVPP01185 164 aa8.55□□□□□ -1.04
SF3A3-204ENST00000462258 SLC2A1P11166 492 aa8.55□□□□□ -1.04
SF3A3-204ENST00000462258 OSMP13725 252 aa8.55□□□□□ -1.04
SF3A3-204ENST00000462258 RPS2P15880 293 aaKnown RBP8.55□□□□□ -1.04
SF3A3-204ENST00000462258 EPHA1P21709 976 aa8.55□□□□□ -1.04
SF3A3-204ENST00000462258 HSD11B1P28845 292 aa8.55□□□□□ -1.04
SF3A3-204ENST00000462258 CD200P41217 278 aa8.55□□□□□ -1.04
SF3A3-204ENST00000462258 GATA4P43694 442 aa8.55□□□□□ -1.04
SF3A3-204ENST00000462258 CX3CR1P49238 355 aa8.55□□□□□ -1.04
SF3A3-204ENST00000462258 SEC61A1P61619 476 aaKnown RBP8.55□□□□□ -1.04
SF3A3-204ENST00000462258 GRB2P62993 217 aaKnown RBP8.55□□□□□ -1.04
SF3A3-204ENST00000462258 ZNF92Q03936 586 aa8.55□□□□□ -1.04
SF3A3-204ENST00000462258 EIF2B1Q14232 305 aaKnown RBP8.55□□□□□ -1.04
SF3A3-204ENST00000462258 ZNF181Q2M3W8 571 aa8.55□□□□□ -1.04
SF3A3-204ENST00000462258 PRAMEF6Q5VXH4 476 aa8.55□□□□□ -1.04
SF3A3-204ENST00000462258 C1orf229Q6ZS94 237 aaPredicted RBP8.55□□□□□ -1.04
SF3A3-204ENST00000462258 DPY19L4Q7Z388 723 aa8.55□□□□□ -1.04
SF3A3-204ENST00000462258 LRRC28Q86X40 367 aaPredicted RBP8.55□□□□□ -1.04
SF3A3-204ENST00000462258 C1orf87Q8N0U7 546 aa8.55□□□□□ -1.04
SF3A3-204ENST00000462258 DVL3Q92997 716 aaPredicted RBP8.55□□□□□ -1.04
SF3A3-204ENST00000462258 KIF17Q9P2E2 1029 aa8.55□□□□□ -1.04
SF3A3-204ENST00000462258 DNAJB9Q9UBS3 223 aa8.55□□□□□ -1.04
SF3A3-204ENST00000462258 NOP16Q9Y3C1 178 aaKnown RBP8.55□□□□□ -1.04
SF3A3-204ENST00000462258 PPIAL4EA0A075B759 164 aa8.54□□□□□ -1.04
SF3A3-204ENST00000462258 PPIAL4CA0A0B4J2A2 164 aa8.54□□□□□ -1.04
SF3A3-204ENST00000462258 C5orf63A6NC05 138 aa8.54□□□□□ -1.04
SF3A3-204ENST00000462258 GGT3PA6NGU5 568 aa8.54□□□□□ -1.04
SF3A3-204ENST00000462258 PRR23D1E9PI22 279 aaPredicted RBP8.54□□□□□ -1.04
SF3A3-204ENST00000462258 PPIAL4DF5H284 164 aa8.54□□□□□ -1.04
SF3A3-204ENST00000462258 TBX1O43435 398 aa8.54□□□□□ -1.04
SF3A3-204ENST00000462258 XRCC2O43543 280 aa8.54□□□□□ -1.04
SF3A3-204ENST00000462258 ZNF205O95201 554 aa8.54□□□□□ -1.04
SF3A3-204ENST00000462258 ANXA2P07355 339 aaKnown RBP8.54□□□□□ -1.04
SF3A3-204ENST00000462258 PRR23D2P0DMB1 279 aaPredicted RBP8.54□□□□□ -1.04
SF3A3-204ENST00000462258 PPIAL4FP0DN26 164 aa8.54□□□□□ -1.04
SF3A3-204ENST00000462258 ANXA8P13928 327 aa8.54□□□□□ -1.04
SF3A3-204ENST00000462258 IRF2P14316 349 aa8.54□□□□□ -1.04
SF3A3-204ENST00000462258 ADRA2CP18825 462 aa8.54□□□□□ -1.04
SF3A3-204ENST00000462258 CA6P23280 308 aa8.54□□□□□ -1.04
SF3A3-204ENST00000462258 ZFP36P26651 326 aaKnown RBP8.54□□□□□ -1.04
SF3A3-204ENST00000462258 GSTT1P30711 240 aa8.54□□□□□ -1.04
SF3A3-204ENST00000462258 SLC15A1P46059 708 aa8.54□□□□□ -1.04
SF3A3-204ENST00000462258 MAB21L1Q13394 359 aa8.54□□□□□ -1.04
SF3A3-204ENST00000462258 GINS1Q14691 196 aa8.54□□□□□ -1.04
SF3A3-204ENST00000462258 OR8G1Q15617 311 aa8.54□□□□□ -1.04
SF3A3-204ENST00000462258 ESCO2Q56NI9 601 aa8.54□□□□□ -1.04
SF3A3-204ENST00000462258 PLBD1Q6P4A8 553 aa8.54□□□□□ -1.04
SF3A3-204ENST00000462258 TIGD4Q8IY51 512 aa8.54□□□□□ -1.04
SF3A3-204ENST00000462258 CELF2-AS1Q8N7Q2 184 aa8.54□□□□□ -1.04
SF3A3-204ENST00000462258 PAPD5Q8NDF8 572 aaKnown RBP8.54□□□□□ -1.04
SF3A3-204ENST00000462258 OR56B2PQ8NGI1 322 aa8.54□□□□□ -1.04
SF3A3-204ENST00000462258 OR11L1Q8NGX0 322 aa8.54□□□□□ -1.04
SF3A3-204ENST00000462258 RNF133Q8WVZ7 376 aa8.54□□□□□ -1.04
SF3A3-204ENST00000462258 ZMYND19Q96E35 227 aaPredicted RBP8.54□□□□□ -1.04
SF3A3-204ENST00000462258 AMELYQ99218 206 aa8.54□□□□□ -1.04
SF3A3-204ENST00000462258 ABHD6Q9BV23 337 aa8.54□□□□□ -1.04
SF3A3-204ENST00000462258 CADM1Q9BY67 442 aaKnown RBP8.54□□□□□ -1.04
SF3A3-204ENST00000462258 SLC22A4Q9H015 551 aa8.54□□□□□ -1.04
SF3A3-204ENST00000462258 OR51V1Q9H2C8 321 aa8.54□□□□□ -1.04
SF3A3-204ENST00000462258 TOR3AQ9H497 397 aa8.54□□□□□ -1.04
SF3A3-204ENST00000462258 MARCH7Q9H992 704 aa8.54□□□□□ -1.04
SF3A3-204ENST00000462258 MRPL15Q9P015 296 aaKnown RBP8.54□□□□□ -1.04
SF3A3-204ENST00000462258 OR5V1Q9UGF6 321 aa8.54□□□□□ -1.04
SF3A3-204ENST00000462258 LRCH1Q9Y2L9 728 aa8.54□□□□□ -1.04
SF3A3-204ENST00000462258 N6AMT1Q9Y5N5 214 aa8.54□□□□□ -1.04
SF3A3-204ENST00000462258 FBN3Q75N90 2809 aa8.53□□□□□ -1.04
SF3A3-204ENST00000462258 GSC2O15499 205 aa8.53□□□□□ -1.04
SF3A3-204ENST00000462258 PRODHO43272 600 aa8.53□□□□□ -1.04
SF3A3-204ENST00000462258 SELENOFO60613 162 aa8.53□□□□□ -1.04
SF3A3-204ENST00000462258 FAM20BO75063 409 aa8.53□□□□□ -1.04
SF3A3-204ENST00000462258 TIPRLO75663 272 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms