RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 AUP1Q9Y679 476 aa15.88■□□□□ 0.13
VARS-220ENST00000461874 CD300LBA8K4G0 201 aa15.87■□□□□ 0.13
VARS-220ENST00000461874 TRIM77I1YAP6 450 aa15.87■□□□□ 0.13
VARS-220ENST00000461874 ZNF593O00488 134 aaPredicted RBP15.87■□□□□ 0.13
VARS-220ENST00000461874 ACOT8O14734 319 aa15.87■□□□□ 0.13
VARS-220ENST00000461874 IFNGP01579 166 aa15.87■□□□□ 0.13
VARS-220ENST00000461874 SPARCP09486 303 aa15.87■□□□□ 0.13
VARS-220ENST00000461874 ANOS1P23352 680 aa15.87■□□□□ 0.13
VARS-220ENST00000461874 FPR2P25090 351 aa15.87■□□□□ 0.13
VARS-220ENST00000461874 CD200P41217 278 aa15.87■□□□□ 0.13
VARS-220ENST00000461874 ZNF92Q03936 586 aa15.87■□□□□ 0.13
VARS-220ENST00000461874 GK3PQ14409 553 aa15.87■□□□□ 0.13
VARS-220ENST00000461874 OR10G2Q8NGC3 310 aa15.87■□□□□ 0.13
VARS-220ENST00000461874 Q8TCH9 128 aa15.87■□□□□ 0.13
VARS-220ENST00000461874 ERGIC1Q969X5 290 aa15.87■□□□□ 0.13
VARS-220ENST00000461874 CCDC124Q96CT7 223 aaKnown RBP15.87■□□□□ 0.13
VARS-220ENST00000461874 CLPTM1LQ96KA5 538 aa15.87■□□□□ 0.13
VARS-220ENST00000461874 LRGUKQ96M69 825 aa15.87■□□□□ 0.13
VARS-220ENST00000461874 NIPSNAP1Q9BPW8 284 aa15.87■□□□□ 0.13
VARS-220ENST00000461874 TMEM246Q9BRR3 403 aa15.87■□□□□ 0.13
VARS-220ENST00000461874 COPS4Q9BT78 406 aa15.87■□□□□ 0.13
VARS-220ENST00000461874 C1orf21Q9H246 121 aa15.87■□□□□ 0.13
VARS-220ENST00000461874 MIOXQ9UGB7 285 aa15.87■□□□□ 0.13
VARS-220ENST00000461874 OR5V1Q9UGF6 321 aa15.87■□□□□ 0.13
VARS-220ENST00000461874 C5orf63A6NC05 138 aa15.86■□□□□ 0.13
VARS-220ENST00000461874 RIIAD1A6NNX1 92 aa15.86■□□□□ 0.13
VARS-220ENST00000461874 CLUP10909 449 aa15.86■□□□□ 0.13
VARS-220ENST00000461874 RPS2P15880 293 aaKnown RBP15.86■□□□□ 0.13
VARS-220ENST00000461874 CA6P23280 308 aa15.86■□□□□ 0.13
VARS-220ENST00000461874 RAD23AP54725 363 aa15.86■□□□□ 0.13
VARS-220ENST00000461874 ZNF404Q494X3 552 aa15.86■□□□□ 0.13
VARS-220ENST00000461874 FAM201AQ5SY85 155 aa15.86■□□□□ 0.13
VARS-220ENST00000461874 LINC01590Q5TEZ4 76 aa15.86■□□□□ 0.13
VARS-220ENST00000461874 C12orf54Q6X4T0 127 aa15.86■□□□□ 0.13
VARS-220ENST00000461874 KLBQ86Z14 1044 aa15.86■□□□□ 0.13
VARS-220ENST00000461874 OR2AE1Q8NHA4 323 aa15.86■□□□□ 0.13
VARS-220ENST00000461874 C22orf15Q8WYQ4 148 aa15.86■□□□□ 0.13
VARS-220ENST00000461874 SLAMF6Q96DU3 332 aa15.86■□□□□ 0.13
VARS-220ENST00000461874 FEVQ99581 238 aa15.86■□□□□ 0.13
VARS-220ENST00000461874 KCNJ15Q99712 375 aa15.86■□□□□ 0.13
VARS-220ENST00000461874 MRI1Q9BV20 369 aa15.86■□□□□ 0.13
VARS-220ENST00000461874 CHID1Q9BWS9 393 aa15.86■□□□□ 0.13
VARS-220ENST00000461874 SSBP3Q9BWW4 388 aaPredicted RBP15.86■□□□□ 0.13
VARS-220ENST00000461874 SLC22A4Q9H015 551 aa15.86■□□□□ 0.13
VARS-220ENST00000461874 CMC2Q9NRP2 79 aa15.86■□□□□ 0.13
VARS-220ENST00000461874 CENPMQ9NSP4 180 aa15.86■□□□□ 0.13
VARS-220ENST00000461874 NOP16Q9Y3C1 178 aaKnown RBP15.86■□□□□ 0.13
VARS-220ENST00000461874 PPIAL4AQ9Y536 164 aa15.86■□□□□ 0.13
VARS-220ENST00000461874 IRF2P14316 349 aa15.85■□□□□ 0.13
VARS-220ENST00000461874 ZNF3P17036 446 aa15.85■□□□□ 0.13
VARS-220ENST00000461874 PRKXP51817 358 aa15.85■□□□□ 0.13
VARS-220ENST00000461874 BLVRAP53004 296 aa15.85■□□□□ 0.13
VARS-220ENST00000461874 PAX2Q02962 417 aa15.85■□□□□ 0.13
VARS-220ENST00000461874 PAX8Q06710 450 aa15.85■□□□□ 0.13
VARS-220ENST00000461874 TAF13Q15543 124 aa15.85■□□□□ 0.13
VARS-220ENST00000461874 OR8G1Q15617 311 aa15.85■□□□□ 0.13
VARS-220ENST00000461874 TUSC1Q2TAM9 212 aa15.85■□□□□ 0.13
VARS-220ENST00000461874 ARMCX4Q5H9R4 360 aa15.85■□□□□ 0.13
VARS-220ENST00000461874 KLF17Q5JT82 389 aaPredicted RBP15.85■□□□□ 0.13
VARS-220ENST00000461874 GLYATL3Q5SZD4 288 aa15.85■□□□□ 0.13
VARS-220ENST00000461874 ADGRG5Q8IZF4 528 aa15.85■□□□□ 0.13
VARS-220ENST00000461874 OR6K6Q8NGW6 343 aa15.85■□□□□ 0.13
VARS-220ENST00000461874 OR11L1Q8NGX0 322 aa15.85■□□□□ 0.13
VARS-220ENST00000461874 GIPC3Q8TF64 312 aa15.85■□□□□ 0.13
VARS-220ENST00000461874 ESM1Q9NQ30 184 aa15.85■□□□□ 0.13
VARS-220ENST00000461874 NUP50Q9UKX7 468 aa15.85■□□□□ 0.13
VARS-220ENST00000461874 TENM1Q9UKZ4 2725 aa15.85■□□□□ 0.13
VARS-220ENST00000461874 ARRDC5A6NEK1 342 aa15.84■□□□□ 0.13
VARS-220ENST00000461874 GGT3PA6NGU5 568 aa15.84■□□□□ 0.13
VARS-220ENST00000461874 ZNF878C9JN71 531 aa15.84■□□□□ 0.13
VARS-220ENST00000461874 GMDSO60547 372 aa15.84■□□□□ 0.13
VARS-220ENST00000461874 FAM20BO75063 409 aa15.84■□□□□ 0.13
VARS-220ENST00000461874 CST1P01037 141 aa15.84■□□□□ 0.13
VARS-220ENST00000461874 CD80P33681 288 aa15.84■□□□□ 0.13
VARS-220ENST00000461874 ACTG1P63261 375 aa15.84■□□□□ 0.13
VARS-220ENST00000461874 MPPED2Q15777 294 aa15.84■□□□□ 0.13
VARS-220ENST00000461874 PRAMEF6Q5VXH4 476 aa15.84■□□□□ 0.13
VARS-220ENST00000461874 IQCF1Q8N6M8 205 aa15.84■□□□□ 0.13
VARS-220ENST00000461874 ZDHHC22Q8N966 263 aa15.84■□□□□ 0.13
VARS-220ENST00000461874 TEX47Q8TBZ9 253 aa15.84■□□□□ 0.13
VARS-220ENST00000461874 NEIL1Q96FI4 390 aaPredicted RBP15.84■□□□□ 0.13
VARS-220ENST00000461874 PLEKHA8Q96JA3 519 aa15.84■□□□□ 0.13
VARS-220ENST00000461874 THTPAQ9BU02 230 aa15.84■□□□□ 0.13
VARS-220ENST00000461874 NTN4Q9HB63 628 aa15.84■□□□□ 0.13
VARS-220ENST00000461874 UFSP2Q9NUQ7 469 aa15.84■□□□□ 0.13
VARS-220ENST00000461874 MRPL15Q9P015 296 aaKnown RBP15.84■□□□□ 0.13
VARS-220ENST00000461874 DHRS12A0PJE2 317 aa15.83■□□□□ 0.12
VARS-220ENST00000461874 AQP12BA6NM10 295 aa15.83■□□□□ 0.12
VARS-220ENST00000461874 PTBP3O95758 552 aaKnown RBP15.83■□□□□ 0.12
VARS-220ENST00000461874 SLC2A1P11166 492 aa15.83■□□□□ 0.12
VARS-220ENST00000461874 GRK5P34947 590 aa15.83■□□□□ 0.12
VARS-220ENST00000461874 SLC15A1P46059 708 aa15.83■□□□□ 0.12
VARS-220ENST00000461874 COMPP49747 757 aaPredicted RBP15.83■□□□□ 0.12
VARS-220ENST00000461874 GNB2P62879 340 aa15.83■□□□□ 0.12
VARS-220ENST00000461874 SPATC1Q76KD6 591 aa15.83■□□□□ 0.12
VARS-220ENST00000461874 NLRC3Q7RTR2 1065 aa15.83■□□□□ 0.12
VARS-220ENST00000461874 AQP12AQ8IXF9 295 aa15.83■□□□□ 0.12
VARS-220ENST00000461874 PLPP7Q8NBV4 271 aa15.83■□□□□ 0.12
VARS-220ENST00000461874 OR8B3Q8NGG8 313 aa15.83■□□□□ 0.12
VARS-220ENST00000461874 CANT1Q8WVQ1 401 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms