RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 OR5AS1Q8N127 324 aa14.68□□□□□ -0.06
USP39-208ENST00000455732 TMEM163Q8TC26 289 aa14.68□□□□□ -0.06
USP39-208ENST00000455732 TEAD3Q99594 435 aa14.68□□□□□ -0.06
USP39-208ENST00000455732 REPIN1Q9BWE0 567 aaKnown RBP14.68□□□□□ -0.06
USP39-208ENST00000455732 YIPF3Q9GZM5 350 aa14.68□□□□□ -0.06
USP39-208ENST00000455732 SP140LQ9H930 580 aa14.68□□□□□ -0.06
USP39-208ENST00000455732 USE1Q9NZ43 259 aa14.68□□□□□ -0.06
USP39-208ENST00000455732 CACNG2Q9Y698 323 aa14.68□□□□□ -0.06
USP39-208ENST00000455732 DYSFO75923 2080 aa14.68□□□□□ -0.06
USP39-208ENST00000455732 ALPLP05186 524 aa14.67□□□□□ -0.06
USP39-208ENST00000455732 HSD11B1P28845 292 aa14.67□□□□□ -0.06
USP39-208ENST00000455732 NAA10P41227 235 aaPredicted RBP14.67□□□□□ -0.06
USP39-208ENST00000455732 CX3CR1P49238 355 aa14.67□□□□□ -0.06
USP39-208ENST00000455732 ZNF92Q03936 586 aa14.67□□□□□ -0.06
USP39-208ENST00000455732 SPRNQ5BIV9 151 aa14.67□□□□□ -0.06
USP39-208ENST00000455732 GLYATL3Q5SZD4 288 aa14.67□□□□□ -0.06
USP39-208ENST00000455732 AADACL4Q5VUY2 407 aa14.67□□□□□ -0.06
USP39-208ENST00000455732 NXNL2Q5VZ03 156 aa14.67□□□□□ -0.06
USP39-208ENST00000455732 SPATC1Q76KD6 591 aa14.67□□□□□ -0.06
USP39-208ENST00000455732 SLC16A9Q7RTY1 509 aa14.67□□□□□ -0.06
USP39-208ENST00000455732 PRSS45Q7RTY3 260 aa14.67□□□□□ -0.06
USP39-208ENST00000455732 ZNF283Q8N7M2 679 aa14.67□□□□□ -0.06
USP39-208ENST00000455732 CLDND2Q8NHS1 167 aa14.67□□□□□ -0.06
USP39-208ENST00000455732 SPSB4Q96A44 273 aa14.67□□□□□ -0.06
USP39-208ENST00000455732 KCNS2Q9ULS6 477 aa14.67□□□□□ -0.06
USP39-208ENST00000455732 WNK2Q9Y3S1 2297 aa14.67□□□□□ -0.06
USP39-208ENST00000455732 STAB1Q9NY15 2570 aa14.66□□□□□ -0.06
USP39-208ENST00000455732 C5orf63A6NC05 138 aa14.66□□□□□ -0.06
USP39-208ENST00000455732 SLC22A31A6NKX4 558 aa14.66□□□□□ -0.06
USP39-208ENST00000455732 M0R129 80 aa14.66□□□□□ -0.06
USP39-208ENST00000455732 WNT9BO14905 357 aa14.66□□□□□ -0.06
USP39-208ENST00000455732 XRCC2O43543 280 aa14.66□□□□□ -0.06
USP39-208ENST00000455732 TGFAP01135 160 aa14.66□□□□□ -0.06
USP39-208ENST00000455732 FAM157CP0CG43 387 aa14.66□□□□□ -0.06
USP39-208ENST00000455732 ALOX5APP20292 161 aa14.66□□□□□ -0.06
USP39-208ENST00000455732 MEPCEQ7L2J0 689 aaKnown RBP14.66□□□□□ -0.06
USP39-208ENST00000455732 TCEANCQ8N8B7 351 aa14.66□□□□□ -0.06
USP39-208ENST00000455732 BHLHE23Q8NDY6 225 aa14.66□□□□□ -0.06
USP39-208ENST00000455732 OR10AD1Q8NGE0 317 aa14.66□□□□□ -0.06
USP39-208ENST00000455732 SPATA3Q8NHX4 192 aa14.66□□□□□ -0.06
USP39-208ENST00000455732 ITLN1Q8WWA0 313 aa14.66□□□□□ -0.06
USP39-208ENST00000455732 CCL17Q92583 94 aa14.66□□□□□ -0.06
USP39-208ENST00000455732 TIMD4Q96H15 378 aa14.66□□□□□ -0.06
USP39-208ENST00000455732 OR2V2Q96R30 315 aa14.66□□□□□ -0.06
USP39-208ENST00000455732 S100A14Q9HCY8 104 aa14.66□□□□□ -0.06
USP39-208ENST00000455732 TMEM100Q9NV29 134 aa14.66□□□□□ -0.06
USP39-208ENST00000455732 LPAR3Q9UBY5 353 aa14.66□□□□□ -0.06
USP39-208ENST00000455732 KLHDC2Q9Y2U9 406 aa14.66□□□□□ -0.06
USP39-208ENST00000455732 NOP16Q9Y3C1 178 aaKnown RBP14.66□□□□□ -0.06
USP39-208ENST00000455732 WIPI2Q9Y4P8 454 aa14.66□□□□□ -0.06
USP39-208ENST00000455732 CD300LBA8K4G0 201 aa14.65□□□□□ -0.06
USP39-208ENST00000455732 IFNL4K9M1U5 179 aa14.65□□□□□ -0.06
USP39-208ENST00000455732 MLNRO43193 412 aa14.65□□□□□ -0.06
USP39-208ENST00000455732 H2BFMP0C1H6 154 aa14.65□□□□□ -0.06
USP39-208ENST00000455732 SLC2A1P11166 492 aa14.65□□□□□ -0.06
USP39-208ENST00000455732 POLR2IP36954 125 aaKnown RBP14.65□□□□□ -0.06
USP39-208ENST00000455732 ALDH3A2P51648 485 aa14.65□□□□□ -0.06
USP39-208ENST00000455732 CDH15P55291 814 aa14.65□□□□□ -0.06
USP39-208ENST00000455732 GID4Q8IVV7 300 aa14.65□□□□□ -0.06
USP39-208ENST00000455732 CELF2-AS1Q8N7Q2 184 aa14.65□□□□□ -0.06
USP39-208ENST00000455732 LINC01356Q8N9X3 169 aa14.65□□□□□ -0.06
USP39-208ENST00000455732 OR52H1Q8NGJ2 320 aa14.65□□□□□ -0.06
USP39-208ENST00000455732 OR2AE1Q8NHA4 323 aa14.65□□□□□ -0.06
USP39-208ENST00000455732 THEM6Q8WUY1 208 aa14.65□□□□□ -0.06
USP39-208ENST00000455732 SPRYD4Q8WW59 207 aaPredicted RBP14.65□□□□□ -0.06
USP39-208ENST00000455732 RAB1CQ92928 201 aa14.65□□□□□ -0.06
USP39-208ENST00000455732 MEGF10Q96KG7 1140 aa14.65□□□□□ -0.06
USP39-208ENST00000455732 CNN2Q99439 309 aaKnown RBP14.65□□□□□ -0.06
USP39-208ENST00000455732 BEX2Q9BXY8 128 aa14.65□□□□□ -0.06
USP39-208ENST00000455732 SLC22A4Q9H015 551 aa14.65□□□□□ -0.06
USP39-208ENST00000455732 SHARPINQ9H0F6 387 aa14.65□□□□□ -0.06
USP39-208ENST00000455732 RIBC2Q9H4K1 309 aa14.65□□□□□ -0.06
USP39-208ENST00000455732 NIPAL2Q9H841 368 aa14.65□□□□□ -0.06
USP39-208ENST00000455732 TMEM106BQ9NUM4 274 aa14.65□□□□□ -0.06
USP39-208ENST00000455732 HAO2Q9NYQ3 351 aa14.65□□□□□ -0.06
USP39-208ENST00000455732 MRPL15Q9P015 296 aaKnown RBP14.65□□□□□ -0.06
USP39-208ENST00000455732 LAMP5Q9UJQ1 280 aa14.65□□□□□ -0.06
USP39-208ENST00000455732 TMEM14AQ9Y6G1 99 aa14.65□□□□□ -0.06
USP39-208ENST00000455732 EI24O14681 340 aa14.64□□□□□ -0.07
USP39-208ENST00000455732 ANXA2P07355 339 aaKnown RBP14.64□□□□□ -0.07
USP39-208ENST00000455732 SRP9P49458 86 aaKnown RBP14.64□□□□□ -0.07
USP39-208ENST00000455732 PRSS12P56730 875 aa14.64□□□□□ -0.07
USP39-208ENST00000455732 ZNF121P58317 390 aaPredicted RBP14.64□□□□□ -0.07
USP39-208ENST00000455732 PSMA6P60900 246 aaKnown RBP14.64□□□□□ -0.07
USP39-208ENST00000455732 LMO4P61968 165 aa14.64□□□□□ -0.07
USP39-208ENST00000455732 FAM120AOSQ5T036 256 aa14.64□□□□□ -0.07
USP39-208ENST00000455732 AVPI1Q5T686 147 aa14.64□□□□□ -0.07
USP39-208ENST00000455732 DEGS2Q6QHC5 323 aa14.64□□□□□ -0.07
USP39-208ENST00000455732 BCDIN3DQ7Z5W3 292 aaKnown RBP14.64□□□□□ -0.07
USP39-208ENST00000455732 IL4I1Q96RQ9 567 aa14.64□□□□□ -0.07
USP39-208ENST00000455732 MNTQ99583 582 aa14.64□□□□□ -0.07
USP39-208ENST00000455732 H2AFY2Q9P0M6 372 aaPredicted RBP14.64□□□□□ -0.07
USP39-208ENST00000455732 ORC6Q9Y5N6 252 aa14.64□□□□□ -0.07
USP39-208ENST00000455732 B4DSR2 109 aa14.63□□□□□ -0.07
USP39-208ENST00000455732 E9PQ18 207 aa14.63□□□□□ -0.07
USP39-208ENST00000455732 H0YL77 283 aa14.63□□□□□ -0.07
USP39-208ENST00000455732 CFL1P23528 166 aaKnown RBP14.63□□□□□ -0.07
USP39-208ENST00000455732 DDOSTP39656 456 aa14.63□□□□□ -0.07
USP39-208ENST00000455732 CD200P41217 278 aa14.63□□□□□ -0.07
USP39-208ENST00000455732 GATA4P43694 442 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms