RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 IQCF6A8MYZ5 107 aa16.95■□□□□ 0.3
COL9A3-202ENST00000452372 SBK2P0C263 348 aa16.95■□□□□ 0.3
COL9A3-202ENST00000452372 SLC2A1P11166 492 aa16.95■□□□□ 0.3
COL9A3-202ENST00000452372 SELEP16581 610 aa16.95■□□□□ 0.3
COL9A3-202ENST00000452372 ANOS1P23352 680 aa16.95■□□□□ 0.3
COL9A3-202ENST00000452372 SNRPGP62308 76 aaKnown RBP16.95■□□□□ 0.3
COL9A3-202ENST00000452372 TSTQ16762 297 aaKnown RBP16.95■□□□□ 0.3
COL9A3-202ENST00000452372 DEGS2Q6QHC5 323 aa16.95■□□□□ 0.3
COL9A3-202ENST00000452372 LRRN1Q6UXK5 716 aa16.95■□□□□ 0.3
COL9A3-202ENST00000452372 Q6ZR03 302 aa16.95■□□□□ 0.3
COL9A3-202ENST00000452372 USP51Q70EK9 711 aa16.95■□□□□ 0.3
COL9A3-202ENST00000452372 PGAP1Q75T13 922 aa16.95■□□□□ 0.3
COL9A3-202ENST00000452372 PRSS45Q7RTY3 260 aa16.95■□□□□ 0.3
COL9A3-202ENST00000452372 OR8G5Q8NG78 346 aa16.95■□□□□ 0.3
COL9A3-202ENST00000452372 ASB17Q8WXJ9 295 aa16.95■□□□□ 0.3
COL9A3-202ENST00000452372 RFKQ969G6 155 aa16.95■□□□□ 0.3
COL9A3-202ENST00000452372 RDH12Q96NR8 316 aa16.95■□□□□ 0.3
COL9A3-202ENST00000452372 MNTQ99583 582 aa16.95■□□□□ 0.3
COL9A3-202ENST00000452372 REPIN1Q9BWE0 567 aaKnown RBP16.95■□□□□ 0.3
COL9A3-202ENST00000452372 NIPAL2Q9H841 368 aa16.95■□□□□ 0.3
COL9A3-202ENST00000452372 C8orf4Q9NR00 106 aa16.95■□□□□ 0.3
COL9A3-202ENST00000452372 FAM118AQ9NWS6 357 aa16.95■□□□□ 0.3
COL9A3-202ENST00000452372 DNAJC27Q9NZQ0 273 aa16.95■□□□□ 0.3
COL9A3-202ENST00000452372 N6AMT1Q9Y5N5 214 aa16.95■□□□□ 0.3
COL9A3-202ENST00000452372 LOC100130705A0A1B0GUX0 176 aa16.94■□□□□ 0.3
COL9A3-202ENST00000452372 C5orf63A6NC05 138 aa16.94■□□□□ 0.3
COL9A3-202ENST00000452372 SLC16A6O15403 523 aa16.94■□□□□ 0.3
COL9A3-202ENST00000452372 CD55P08174 381 aa16.94■□□□□ 0.3
COL9A3-202ENST00000452372 ACHEP22303 614 aa16.94■□□□□ 0.3
COL9A3-202ENST00000452372 CRYBB2P43320 205 aa16.94■□□□□ 0.3
COL9A3-202ENST00000452372 NR4A2P43354 598 aa16.94■□□□□ 0.3
COL9A3-202ENST00000452372 ZNF121P58317 390 aaPredicted RBP16.94■□□□□ 0.3
COL9A3-202ENST00000452372 ELF3P78545 371 aaPredicted RBP16.94■□□□□ 0.3
COL9A3-202ENST00000452372 ZNF92Q03936 586 aa16.94■□□□□ 0.3
COL9A3-202ENST00000452372 LOXL1Q08397 574 aaPredicted RBP16.94■□□□□ 0.3
COL9A3-202ENST00000452372 RIN1Q13671 783 aa16.94■□□□□ 0.3
COL9A3-202ENST00000452372 GLYATL3Q5SZD4 288 aa16.94■□□□□ 0.3
COL9A3-202ENST00000452372 MEDAGQ5VYS4 303 aa16.94■□□□□ 0.3
COL9A3-202ENST00000452372 KRT77Q7Z794 578 aa16.94■□□□□ 0.3
COL9A3-202ENST00000452372 SLC35F2Q8IXU6 374 aa16.94■□□□□ 0.3
COL9A3-202ENST00000452372 OR5AS1Q8N127 324 aa16.94■□□□□ 0.3
COL9A3-202ENST00000452372 YIPF5Q969M3 257 aa16.94■□□□□ 0.3
COL9A3-202ENST00000452372 EGLN1Q9GZT9 426 aa16.94■□□□□ 0.3
COL9A3-202ENST00000452372 DCLRE1BQ9H816 532 aa16.94■□□□□ 0.3
COL9A3-202ENST00000452372 CHODLQ9H9P2 273 aa16.94■□□□□ 0.3
COL9A3-202ENST00000452372 SAP30LQ9HAJ7 183 aa16.94■□□□□ 0.3
COL9A3-202ENST00000452372 CLN6Q9NWW5 311 aa16.94■□□□□ 0.3
COL9A3-202ENST00000452372 SMPD3Q9NY59 655 aaPredicted RBP16.94■□□□□ 0.3
COL9A3-202ENST00000452372 COPS3Q9UNS2 423 aa16.94■□□□□ 0.3
COL9A3-202ENST00000452372 DLGAP1O14490 977 aa16.93■□□□□ 0.3
COL9A3-202ENST00000452372 TPD52L2O43399 206 aaKnown RBP16.93■□□□□ 0.3
COL9A3-202ENST00000452372 XRCC2O43543 280 aa16.93■□□□□ 0.3
COL9A3-202ENST00000452372 CD5LO43866 347 aa16.93■□□□□ 0.3
COL9A3-202ENST00000452372 ANXA2P07355 339 aaKnown RBP16.93■□□□□ 0.3
COL9A3-202ENST00000452372 ROM1Q03395 351 aa16.93■□□□□ 0.3
COL9A3-202ENST00000452372 POU4F2Q12837 409 aa16.93■□□□□ 0.3
COL9A3-202ENST00000452372 OCLNQ16625 522 aa16.93■□□□□ 0.3
COL9A3-202ENST00000452372 LRRC36Q1X8D7 754 aa16.93■□□□□ 0.3
COL9A3-202ENST00000452372 LPCAT4Q643R3 524 aa16.93■□□□□ 0.3
COL9A3-202ENST00000452372 MRPL21Q7Z2W9 205 aaKnown RBP16.93■□□□□ 0.3
COL9A3-202ENST00000452372 GALNT4Q8N4A0 578 aa16.93■□□□□ 0.3
COL9A3-202ENST00000452372 PACRGLQ8N7B6 248 aa16.93■□□□□ 0.3
COL9A3-202ENST00000452372 OR52H1Q8NGJ2 320 aa16.93■□□□□ 0.3
COL9A3-202ENST00000452372 OR51G2Q8NGK0 314 aa16.93■□□□□ 0.3
COL9A3-202ENST00000452372 OR13G1Q8NGZ3 307 aa16.93■□□□□ 0.3
COL9A3-202ENST00000452372 OR2AE1Q8NHA4 323 aa16.93■□□□□ 0.3
COL9A3-202ENST00000452372 SLC30A2Q9BRI3 323 aa16.93■□□□□ 0.3
COL9A3-202ENST00000452372 MROQ9BYG7 248 aa16.93■□□□□ 0.3
COL9A3-202ENST00000452372 OPA3Q9H6K4 179 aa16.93■□□□□ 0.3
COL9A3-202ENST00000452372 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.93■□□□□ 0.3
COL9A3-202ENST00000452372 LRP12Q9Y561 859 aa16.93■□□□□ 0.3
COL9A3-202ENST00000452372 PHYHO14832 338 aa16.92■□□□□ 0.3
COL9A3-202ENST00000452372 ENTPD6O75354 484 aa16.92■□□□□ 0.3
COL9A3-202ENST00000452372 ZNF254O75437 659 aa16.92■□□□□ 0.3
COL9A3-202ENST00000452372 RP2O75695 350 aa16.92■□□□□ 0.3
COL9A3-202ENST00000452372 USF1P22415 310 aaPredicted RBP16.92■□□□□ 0.3
COL9A3-202ENST00000452372 TNFSF4P23510 183 aa16.92■□□□□ 0.3
COL9A3-202ENST00000452372 PEX2P28328 305 aa16.92■□□□□ 0.3
COL9A3-202ENST00000452372 DCTDP32321 178 aa16.92■□□□□ 0.3
COL9A3-202ENST00000452372 PRSS12P56730 875 aa16.92■□□□□ 0.3
COL9A3-202ENST00000452372 TMEM33P57088 247 aa16.92■□□□□ 0.3
COL9A3-202ENST00000452372 TNFAIP6P98066 277 aaPredicted RBP16.92■□□□□ 0.3
COL9A3-202ENST00000452372 ZNF322Q6U7Q0 402 aaPredicted RBP16.92■□□□□ 0.3
COL9A3-202ENST00000452372 FAM57BQ71RH2 274 aa16.92■□□□□ 0.3
COL9A3-202ENST00000452372 ZNF679Q8IYX0 411 aa16.92■□□□□ 0.3
COL9A3-202ENST00000452372 OR2Z1Q8NG97 314 aa16.92■□□□□ 0.3
COL9A3-202ENST00000452372 SPSB4Q96A44 273 aa16.92■□□□□ 0.3
COL9A3-202ENST00000452372 SGK3Q96BR1 496 aa16.92■□□□□ 0.3
COL9A3-202ENST00000452372 ELMOD3Q96FG2 381 aa16.92■□□□□ 0.3
COL9A3-202ENST00000452372 OR8B4Q96RC9 309 aa16.92■□□□□ 0.3
COL9A3-202ENST00000452372 BPESC1Q9GZL8 116 aa16.92■□□□□ 0.3
COL9A3-202ENST00000452372 ZNF319Q9P2F9 582 aa16.92■□□□□ 0.3
COL9A3-202ENST00000452372 MALRD1Q5VYJ5 2156 aa16.91■□□□□ 0.3
COL9A3-202ENST00000452372 SVEP1Q4LDE5 3571 aa16.91■□□□□ 0.3
COL9A3-202ENST00000452372 IGHV1-69-2A0A0G2JMI3 117 aa16.91■□□□□ 0.3
COL9A3-202ENST00000452372 A0A1B0GWJ7 208 aa16.91■□□□□ 0.3
COL9A3-202ENST00000452372 PRR32B1ATL7 298 aa16.91■□□□□ 0.3
COL9A3-202ENST00000452372 ZNF670-ZNF695F2Z2N8 137 aa16.91■□□□□ 0.3
COL9A3-202ENST00000452372 CASQ2O14958 399 aaPredicted RBP16.91■□□□□ 0.3
COL9A3-202ENST00000452372 TBX1O43435 398 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms